Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409116

Identifier: 41409116

GI number: 41409116

Start: 3357422

End: 3357985

Strand: Direct

Name: 41409116

Synonym: MAP3018

Alternate gene names: NA

Gene position: 3357422-3357985 (Clockwise)

Preceding gene: 41409113

Following gene: 41409119

Centisome position: 69.51

GC content: 77.13

Gene sequence:

>564_bases
GTGGCAACCGAATCGGAGGCCGACGGCGGGCCCCCGCGGGCGGTGATCATGGTCGCGGTCGCGCTGGCGGTGACGACGAT
CGGGGTGATCCTGGCGATCGCGGCGACCCGTGAGGCGCCGCCGCAACCCGTTGCCGTAGCGGCCTTTCCGGCGCCGCACG
CCGGGGACGCCGCCTGCCGGGCATTGCTGGACGCGCTGCCGCAGCGGCTCGGCGACTATCAGCGCGCCCCGCTCGAGCAG
CCGGCCCCGGCGGGCGCCGCGGCCTGGCGGACCGGGCCGGACAGCGAGCCGGTGGTGCTGCGCTGCGGCCTGGACCGCCC
GGCCGAGTTCGTCGCCGGATCCCCCATCCAGGTCGTCGACCGGGTGCAGTGGTTCGCGGTGCGCCCCGACCCGCAATCCG
CCGGGGACGCCGGCAGATCCACCTGGTACACGGTGGACCGCCCGGTGTATGTGGCGCTCACGCTGCCGTCGGGCTCGGGC
CCGGCGCCCATCCAGCGGCTCTCCGACGTGATCGGGCAGCGCATCGCGGCGGCGCCGGTCAACCCCGGGCCGCCCGCCGG
CTAG

Upstream 100 bases:

>100_bases
CCCGCACGCCACCACCATAGGGCTGTCGCCCGGGCGGGCCGACCGCCAATACTGGGAAGCCGGGTAACAGTGGCCCGACA
GACAAGGAGGTGCGCGGGCG

Downstream 100 bases:

>100_bases
CGCAGCCCGACGCCGCGGGCCAGGGCCGTCTCCACCATGGTGGCCAGCAGACTCGGGTAGTCCACGCCGCTGGCCGCCCA
CATCCGCGGGTACATCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MATESEADGGPPRAVIMVAVALAVTTIGVILAIAATREAPPQPVAVAAFPAPHAGDAACRALLDALPQRLGDYQRAPLEQ
PAPAGAAAWRTGPDSEPVVLRCGLDRPAEFVAGSPIQVVDRVQWFAVRPDPQSAGDAGRSTWYTVDRPVYVALTLPSGSG
PAPIQRLSDVIGQRIAAAPVNPGPPAG

Sequences:

>Translated_187_residues
MATESEADGGPPRAVIMVAVALAVTTIGVILAIAATREAPPQPVAVAAFPAPHAGDAACRALLDALPQRLGDYQRAPLEQ
PAPAGAAAWRTGPDSEPVVLRCGLDRPAEFVAGSPIQVVDRVQWFAVRPDPQSAGDAGRSTWYTVDRPVYVALTLPSGSG
PAPIQRLSDVIGQRIAAAPVNPGPPAG
>Mature_186_residues
ATESEADGGPPRAVIMVAVALAVTTIGVILAIAATREAPPQPVAVAAFPAPHAGDAACRALLDALPQRLGDYQRAPLEQP
APAGAAAWRTGPDSEPVVLRCGLDRPAEFVAGSPIQVVDRVQWFAVRPDPQSAGDAGRSTWYTVDRPVYVALTLPSGSGP
APIQRLSDVIGQRIAAAPVNPGPPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19160; Mature: 19029

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATESEADGGPPRAVIMVAVALAVTTIGVILAIAATREAPPQPVAVAAFPAPHAGDAACR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHH
ALLDALPQRLGDYQRAPLEQPAPAGAAAWRTGPDSEPVVLRCGLDRPAEFVAGSPIQVVD
HHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHC
RVQWFAVRPDPQSAGDAGRSTWYTVDRPVYVALTLPSGSGPAPIQRLSDVIGQRIAAAPV
CCEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
NPGPPAG
CCCCCCC
>Mature Secondary Structure 
ATESEADGGPPRAVIMVAVALAVTTIGVILAIAATREAPPQPVAVAAFPAPHAGDAACR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHH
ALLDALPQRLGDYQRAPLEQPAPAGAAAWRTGPDSEPVVLRCGLDRPAEFVAGSPIQVVD
HHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHC
RVQWFAVRPDPQSAGDAGRSTWYTVDRPVYVALTLPSGSGPAPIQRLSDVIGQRIAAAPV
CCEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
NPGPPAG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA