| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yloV [H]
Identifier: 41409108
GI number: 41409108
Start: 3347852
End: 3349579
Strand: Reverse
Name: yloV [H]
Synonym: MAP3010c
Alternate gene names: 41409108
Gene position: 3349579-3347852 (Counterclockwise)
Preceding gene: 41409109
Following gene: 41409107
Centisome position: 69.35
GC content: 75.23
Gene sequence:
>1728_bases GTGGCGGCGCAGAGGAGGTGGGTAACCCTGGGCAGTTCGTGGACCTCGCACGATCGTCCGCTGGACGCGGCGGCCCTGCG GGACTGGGCGCACACCGCCGTCAGTGACCTGATCACCCACATCGACGAGATCAACCGGCTCAACGTCTTCCCCGTCGCCG ACTCCGACACCGGCGCCAACATGCTGTTCACCATGCGCTCGGCGCTGGCCGAGCTGCAGGCGGCCGGCGGCCCCGGCTGC GTCGCCCGGGCCGCCGCGGCGCTGTCCACCGGCGCGCTGAACGGCGCCCGCGGCAACTCCGGGGTGATCCTGTCGCAGAT CCTGCGCGGCGTCGCCGACGTCACCGCGACGGCCGCGGCCCGGGCCGGTGGTGAGTTGGCGCGCATCGAGGCGGCCGTGC TGGGTGCGGCGCTGCAGCGCGGCGTGGAGCTGGTCATCACCTCGATGGGTGGTGAGGAGATCCCGGGGACCATCGTCTCG GTGCTGCGCGCGGCCGCCACCGCCGTGGCGCAGTGCGCCCGGGCCGGCGAGGGAGTCACCGCGGCGGTCATCGCCGCCGG CGACGCGGCGGTGATCGCCCTGGAGAAGACGCCCGAGCAGCTCGACGTGCTGGCCGACGCCGGCGCCGTGGACGCAGGCG GGCGGGGGCTGCTGGTGCTGCTGGACGCGCTGCGCACCACCATCACCGGGCAGGCGCCGGCCCGCACCGTCTACCGGCTC GCGCCGCGGACGGCCGCACCGGAGGCCGCCGCGCCCCGCCCGGCGCCGCAGTTCGAGGTGATGTACCGGCTGGACGACTG CGCACCCGCGGCGGCCGACGCGCTGCGCGACCGGCTCACCGAGCTGGGCGATTCGGTCGGCATCGCCTCGGCGCCGTCGT CGGCCCAGCACACCTATTCGGTGCACGTGCATACCGACGACGCCGGCGCCGCCGTGGAAGCCGGGCTGGCGGCCGGACGG CTCAGCCGCATCGTGATCTCGGCGTTGAGCTCCGGCGGCCCCGGGCTGCCCGCGGGCGGCTGGACGCGGGAACGCGCGGT GCTGGCCGTCGTCGACGGCGACGGCGCGGCCGGCCTGTTCTCCGGTGAGGGCGCCTGCGTGCTGCAGCGCGACCCGGCCG CGGCCGACCCGGTTACCACGATCAGCGCGCACCAGCTGATGCGGGCCGTGGTCGACACCGGCGCCGCGCAGGTGATGGTG CTGCCCAACGGTTATGTGGCCGCCGAGGAGCTGGTCGCCGGCTGCACCGCGGCCATCGGCTGGGGCATCGACGTGGTGCC CATCCCGACCGAGTCGATGGTGCAGGGGCTGGCCGCGCTGGCCGTGCACGACACCGGCCGGCAGGCCGTCGACGACGGCT ACACCATGGCCCGCGCCGCCGGGGCGGCGCGGCACGGCTCGGTGCGCATCGCCACCGAGACCGCGCTGACCTGGGCGGGG AGCTGCAGGCCCGGCGACGGCCTGGGCATCGCCGGCGGTGAGGTGCTGATCGTGGCCGCCGACGCGGTCGGGGCGGCGAT CGGCCTGCTCGATCTGCTGCTGGCCTCGGGCGGCGACCTGGTGACGGTGTTGCTCGGTGCCGGCATCGACGCCGACGGCT CGGATGCTCATGCCGGCGCGGTCGTCGACATCCTGGAAGAACACATGCACGACCATCACCCGGGCACCGAGCTGGTCACC TACCGCACCGGCCACCACGGCGACGTGCTGCTGATCGGGGTCGAATAG
Upstream 100 bases:
>100_bases GCAGGGTTATTAGCCGCGCCCGCGGTACCCGATCTTCCTCACCGGCGGGGAGTAACCGGGCGCAGCGCCCGCGTCGCCGG GCTACGCTGGCGCCCACCGG
Downstream 100 bases:
>100_bases CGATGGCCTCGCTGACCGACCGGCTGGACTTCGTGGTGGGAGCCAAGGCCGCCGAACAGCTCGAGGAGTTGTTCGGCATC CGCACCGTCGACGACCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MAAQRRWVTLGSSWTSHDRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSALAELQAAGGPGC VARAAAALSTGALNGARGNSGVILSQILRGVADVTATAAARAGGELARIEAAVLGAALQRGVELVITSMGGEEIPGTIVS VLRAAATAVAQCARAGEGVTAAVIAAGDAAVIALEKTPEQLDVLADAGAVDAGGRGLLVLLDALRTTITGQAPARTVYRL APRTAAPEAAAPRPAPQFEVMYRLDDCAPAAADALRDRLTELGDSVGIASAPSSAQHTYSVHVHTDDAGAAVEAGLAAGR LSRIVISALSSGGPGLPAGGWTRERAVLAVVDGDGAAGLFSGEGACVLQRDPAAADPVTTISAHQLMRAVVDTGAAQVMV LPNGYVAAEELVAGCTAAIGWGIDVVPIPTESMVQGLAALAVHDTGRQAVDDGYTMARAAGAARHGSVRIATETALTWAG SCRPGDGLGIAGGEVLIVAADAVGAAIGLLDLLLASGGDLVTVLLGAGIDADGSDAHAGAVVDILEEHMHDHHPGTELVT YRTGHHGDVLLIGVE
Sequences:
>Translated_575_residues MAAQRRWVTLGSSWTSHDRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSALAELQAAGGPGC VARAAAALSTGALNGARGNSGVILSQILRGVADVTATAAARAGGELARIEAAVLGAALQRGVELVITSMGGEEIPGTIVS VLRAAATAVAQCARAGEGVTAAVIAAGDAAVIALEKTPEQLDVLADAGAVDAGGRGLLVLLDALRTTITGQAPARTVYRL APRTAAPEAAAPRPAPQFEVMYRLDDCAPAAADALRDRLTELGDSVGIASAPSSAQHTYSVHVHTDDAGAAVEAGLAAGR LSRIVISALSSGGPGLPAGGWTRERAVLAVVDGDGAAGLFSGEGACVLQRDPAAADPVTTISAHQLMRAVVDTGAAQVMV LPNGYVAAEELVAGCTAAIGWGIDVVPIPTESMVQGLAALAVHDTGRQAVDDGYTMARAAGAARHGSVRIATETALTWAG SCRPGDGLGIAGGEVLIVAADAVGAAIGLLDLLLASGGDLVTVLLGAGIDADGSDAHAGAVVDILEEHMHDHHPGTELVT YRTGHHGDVLLIGVE >Mature_574_residues AAQRRWVTLGSSWTSHDRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSALAELQAAGGPGCV ARAAAALSTGALNGARGNSGVILSQILRGVADVTATAAARAGGELARIEAAVLGAALQRGVELVITSMGGEEIPGTIVSV LRAAATAVAQCARAGEGVTAAVIAAGDAAVIALEKTPEQLDVLADAGAVDAGGRGLLVLLDALRTTITGQAPARTVYRLA PRTAAPEAAAPRPAPQFEVMYRLDDCAPAAADALRDRLTELGDSVGIASAPSSAQHTYSVHVHTDDAGAAVEAGLAAGRL SRIVISALSSGGPGLPAGGWTRERAVLAVVDGDGAAGLFSGEGACVLQRDPAAADPVTTISAHQLMRAVVDTGAAQVMVL PNGYVAAEELVAGCTAAIGWGIDVVPIPTESMVQGLAALAVHDTGRQAVDDGYTMARAAGAARHGSVRIATETALTWAGS CRPGDGLGIAGGEVLIVAADAVGAAIGLLDLLLASGGDLVTVLLGAGIDADGSDAHAGAVVDILEEHMHDHHPGTELVTY RTGHHGDVLLIGVE
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 57717; Mature: 57586
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQRRWVTLGSSWTSHDRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGAN CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCH MLFTMRSALAELQAAGGPGCVARAAAALSTGALNGARGNSGVILSQILRGVADVTATAAA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RAGGELARIEAAVLGAALQRGVELVITSMGGEEIPGTIVSVLRAAATAVAQCARAGEGVT HCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE AAVIAAGDAAVIALEKTPEQLDVLADAGAVDAGGRGLLVLLDALRTTITGQAPARTVYRL EEEEECCCEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHC APRTAAPEAAAPRPAPQFEVMYRLDDCAPAAADALRDRLTELGDSVGIASAPSSAQHTYS CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE VHVHTDDAGAAVEAGLAAGRLSRIVISALSSGGPGLPAGGWTRERAVLAVVDGDGAAGLF EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEE SGEGACVLQRDPAAADPVTTISAHQLMRAVVDTGAAQVMVLPNGYVAAEELVAGCTAAIG CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHC WGIDVVPIPTESMVQGLAALAVHDTGRQAVDDGYTMARAAGAARHGSVRIATETALTWAG CCEEEEECCHHHHHHHHHHHHEECCCCHHHHCCHHHHHHHCCCCCCCEEEEEEEEEEECC SCRPGDGLGIAGGEVLIVAADAVGAAIGLLDLLLASGGDLVTVLLGAGIDADGSDAHAGA CCCCCCCCEECCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHH VVDILEEHMHDHHPGTELVTYRTGHHGDVLLIGVE HHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECC >Mature Secondary Structure AAQRRWVTLGSSWTSHDRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGAN CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCH MLFTMRSALAELQAAGGPGCVARAAAALSTGALNGARGNSGVILSQILRGVADVTATAAA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RAGGELARIEAAVLGAALQRGVELVITSMGGEEIPGTIVSVLRAAATAVAQCARAGEGVT HCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE AAVIAAGDAAVIALEKTPEQLDVLADAGAVDAGGRGLLVLLDALRTTITGQAPARTVYRL EEEEECCCEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHC APRTAAPEAAAPRPAPQFEVMYRLDDCAPAAADALRDRLTELGDSVGIASAPSSAQHTYS CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE VHVHTDDAGAAVEAGLAAGRLSRIVISALSSGGPGLPAGGWTRERAVLAVVDGDGAAGLF EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEE SGEGACVLQRDPAAADPVTTISAHQLMRAVVDTGAAQVMVLPNGYVAAEELVAGCTAAIG CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHC WGIDVVPIPTESMVQGLAALAVHDTGRQAVDDGYTMARAAGAARHGSVRIATETALTWAG CCEEEEECCHHHHHHHHHHHHEECCCCHHHHCCHHHHHHHCCCCCCCEEEEEEEEEEECC SCRPGDGLGIAGGEVLIVAADAVGAAIGLLDLLLASGGDLVTVLLGAGIDADGSDAHAGA CCCCCCCCEECCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHH VVDILEEHMHDHHPGTELVTYRTGHHGDVLLIGVE HHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]