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The map label for this gene is ftsY

Identifier: 41409087

GI number: 41409087

Start: 3324456

End: 3325790

Strand: Reverse

Name: ftsY

Synonym: MAP2989c

Alternate gene names: 41409087

Gene position: 3325790-3324456 (Counterclockwise)

Preceding gene: 41409088

Following gene: 41409086

Centisome position: 68.86

GC content: 74.01

Gene sequence:

>1335_bases
GTGTCCCAAGGTCTTTGGATCGCCGTCGCGGTCCTCGTCGTCATCGCCGTCCTGGTCGTCATCACCGCACTGGTCCTGGG
CCTGGCGCGGTACCGCCGGCGCCGGATCAGCTTCTCGACCCGCCCCGAACCCGGGGCGATCGACCGGTCCGGCGGATACA
CCGCGTCCTCGGGCATCACGTTCAGCCAGGCACCGACCGCCCAGCCGGCCGAGCGGCTCGACACCACCGGCCTGCCGGCG
GTAGGCGACGACGCCACCGTCCCCCGGGACGCGCCGCGACGCACCATCTCCGAGGTCGAGCTTCCCGAACCCGAGACGCC
GGCGGCGCCGGCTGCTGAGGCCCCGGCCCCCGAGGCTCCCGAATCTCCCGAGGCGCCGGCTCCGGAGGCCCCCGCTCCCG
AGATCGAGGAGATCGCGCCCACCGAGGGCCGGCTGGAGCGGCTGCGCGGCCGGCTGGCCCGCTCCCAGAACGCGCTCGGC
CGCAGCCTGCTGGGCCTGATCGGCGGCGGCGACCTGGACGAAGACGCCTGGCAGGACGTCGAGGACACCCTGCTGGTCGC
CGACCTGGGCCCGGTGGTCACCGAATCGGTCATCGCCCAGCTGCGCGGCCGGCTGGCCAGCAGCGACGTGCGCACCGAGG
CGGACGCCAAGGCCGTGCTGCGCGACGTGCTGATCAACGAGCTGCGGCCCGACCTGGACCGCTCGATCCGGGCGCTGCCG
CACGCCGACCACCCGTCGGTGCTGCTGATCGTCGGCGTCAACGGCACCGGAAAGACCACCACCGTCGGCAAACTGGCCCG
GGTGCTGGTCGCCGACGGGCGGCGCGTCGTGCTGGGCGCGGCCGACACCTTCCGCGCCGCCGCGGCCGACCAGCTGCAGA
CCTGGGCGTCACGGGTGGGCGCGGAGGTGGTGCGCGGCGCCGAGGGCGCCGACCCGGCCTCGGTGGCGTTCGACGCCGTC
GACAAGGGCATCGCCGCCGGCGCCGACGTGGTGCTCATCGACACCGCGGGCCGGCTGCACACCAAGGTCGGGCTGATGGA
CGAGCTCGACAAGGTCAAGCGGGTGGTCACCCGCTGCGCCGCCGTCGACGAGGTGCTGCTGGTGCTCGACGCCACCATCG
GGCAGAACGGGCTGGCCCAGGCCCGGGTGTTCGCCGAGGTCGTCGAGATCACCGGCGCCGTGCTGACCAAACTGGACGGA
ACGGCCAAGGGCGGCATCGTCTTCCGCGTTCAGCAGGAACTCGGGGTGCCGGTGAAACTGGTCGGCCTCGGCGAGGGCCC
CGACGATCTGGCGCCGTTCGAGCCGGCCGCCTTCGTCGACGCGCTGCTCGGCTGA

Upstream 100 bases:

>100_bases
TCAGCAGGTGGACCAGCTGGTCACCACCTGAGCAGCGCGGATGGCGGGCGGTCGAGGCCCGGTGGCCGGGCGGCACGGGT
CCGCTTGAAACAATGTCAGC

Downstream 100 bases:

>100_bases
AAACCCCTCCGCGGCCCCGCGGGACGTTAATCCCGCCGAAACACAGCGGCACTATCGCCGAAACAACCATTGCGCAATGT
TCTGGATCAGGTCATCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MSQGLWIAVAVLVVIAVLVVITALVLGLARYRRRRISFSTRPEPGAIDRSGGYTASSGITFSQAPTAQPAERLDTTGLPA
VGDDATVPRDAPRRTISEVELPEPETPAAPAAEAPAPEAPESPEAPAPEAPAPEIEEIAPTEGRLERLRGRLARSQNALG
RSLLGLIGGGDLDEDAWQDVEDTLLVADLGPVVTESVIAQLRGRLASSDVRTEADAKAVLRDVLINELRPDLDRSIRALP
HADHPSVLLIVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVGAEVVRGAEGADPASVAFDAV
DKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRCAAVDEVLLVLDATIGQNGLAQARVFAEVVEITGAVLTKLDG
TAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDALLG

Sequences:

>Translated_444_residues
MSQGLWIAVAVLVVIAVLVVITALVLGLARYRRRRISFSTRPEPGAIDRSGGYTASSGITFSQAPTAQPAERLDTTGLPA
VGDDATVPRDAPRRTISEVELPEPETPAAPAAEAPAPEAPESPEAPAPEAPAPEIEEIAPTEGRLERLRGRLARSQNALG
RSLLGLIGGGDLDEDAWQDVEDTLLVADLGPVVTESVIAQLRGRLASSDVRTEADAKAVLRDVLINELRPDLDRSIRALP
HADHPSVLLIVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVGAEVVRGAEGADPASVAFDAV
DKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRCAAVDEVLLVLDATIGQNGLAQARVFAEVVEITGAVLTKLDG
TAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDALLG
>Mature_443_residues
SQGLWIAVAVLVVIAVLVVITALVLGLARYRRRRISFSTRPEPGAIDRSGGYTASSGITFSQAPTAQPAERLDTTGLPAV
GDDATVPRDAPRRTISEVELPEPETPAAPAAEAPAPEAPESPEAPAPEAPAPEIEEIAPTEGRLERLRGRLARSQNALGR
SLLGLIGGGDLDEDAWQDVEDTLLVADLGPVVTESVIAQLRGRLASSDVRTEADAKAVLRDVLINELRPDLDRSIRALPH
ADHPSVLLIVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVGAEVVRGAEGADPASVAFDAVD
KGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRCAAVDEVLLVLDATIGQNGLAQARVFAEVVEITGAVLTKLDGT
AKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=272, Percent_Identity=31.25, Blast_Score=130, Evalue=4e-30,
Organism=Homo sapiens, GI226371618, Length=231, Percent_Identity=32.4675324675325, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI295424842, Length=317, Percent_Identity=29.9684542586751, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI23308697, Length=317, Percent_Identity=29.9684542586751, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI89061728, Length=134, Percent_Identity=33.5820895522388, Blast_Score=82, Evalue=9e-16,
Organism=Escherichia coli, GI1789874, Length=320, Percent_Identity=42.5, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI1788963, Length=292, Percent_Identity=33.5616438356164, Blast_Score=143, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=299, Percent_Identity=32.1070234113712, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI193206261, Length=275, Percent_Identity=32.3636363636364, Blast_Score=106, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=260, Percent_Identity=30, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6320498, Length=229, Percent_Identity=28.82096069869, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17647949, Length=262, Percent_Identity=31.6793893129771, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24641198, Length=285, Percent_Identity=28.0701754385965, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 46237; Mature: 46106

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQGLWIAVAVLVVIAVLVVITALVLGLARYRRRRISFSTRPEPGAIDRSGGYTASSGIT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEE
FSQAPTAQPAERLDTTGLPAVGDDATVPRDAPRRTISEVELPEPETPAAPAAEAPAPEAP
ECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
ESPEAPAPEAPAPEIEEIAPTEGRLERLRGRLARSQNALGRSLLGLIGGGDLDEDAWQDV
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCH
EDTLLVADLGPVVTESVIAQLRGRLASSDVRTEADAKAVLRDVLINELRPDLDRSIRALP
HHEEEHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
HADHPSVLLIVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVG
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH
AEVVRGAEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRCA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
AVDEVLLVLDATIGQNGLAQARVFAEVVEITGAVLTKLDGTAKGGIVFRVQQELGVPVKL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCEEE
VGLGEGPDDLAPFEPAAFVDALLG
EECCCCCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure 
SQGLWIAVAVLVVIAVLVVITALVLGLARYRRRRISFSTRPEPGAIDRSGGYTASSGIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEE
FSQAPTAQPAERLDTTGLPAVGDDATVPRDAPRRTISEVELPEPETPAAPAAEAPAPEAP
ECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
ESPEAPAPEAPAPEIEEIAPTEGRLERLRGRLARSQNALGRSLLGLIGGGDLDEDAWQDV
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCH
EDTLLVADLGPVVTESVIAQLRGRLASSDVRTEADAKAVLRDVLINELRPDLDRSIRALP
HHEEEHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
HADHPSVLLIVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVG
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH
AEVVRGAEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRCA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
AVDEVLLVLDATIGQNGLAQARVFAEVVEITGAVLTKLDGTAKGGIVFRVQQELGVPVKL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCEEE
VGLGEGPDDLAPFEPAAFVDALLG
EECCCCCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]