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The map label for this gene is 41409051

Identifier: 41409051

GI number: 41409051

Start: 3286830

End: 3287252

Strand: Direct

Name: 41409051

Synonym: MAP2953

Alternate gene names: NA

Gene position: 3286830-3287252 (Clockwise)

Preceding gene: 41409049

Following gene: 41409055

Centisome position: 68.05

GC content: 70.92

Gene sequence:

>423_bases
ATGACTGAGGCCGACGACGCGCCGCTGGGTTACCTGCTGTACCGGGTGGGGGCCGCGCTGCGCCCGGAGGTTTCCGGGGC
GCTGGGCCCGCTGGGTTTGACCCTGCCCGAATTCGTTTGCCTGCGCATTCTTTCGATGTTCCCGGGCATGTCGAGTGCGG
AGTTGTCCCGCCGCGCGGGCGTCACCCCGCAGGCGATGAACACGGTGCTGCGCCGGCTGCAGGAGGTCGGCGCGGTGGCG
CGGCCGTCGTCGGTGTCGTCCGGGCGCTCGCTGCCGGCCCACCTGACCGGCGCGGGCTGCACCCTGCTCAAGCGGGCCGA
AGCCGCCGTGCGCGGCGCCGATGCCCGAATCCTGGCCAAGCTCACCGAGACTCAGCAGCGCGAGTTCAAACGAATGCTGC
AGAAACTGGGCTCCGACGGCTGA

Upstream 100 bases:

>100_bases
ACCCGACTGGTTACCGCCGGACGGTTACCCCGTTGCGGGGCCGGCAATCACGCCGCCGAACACCCGCACCGGGGCGCCGC
GATATGTCAAGATCGTTGAC

Downstream 100 bases:

>100_bases
TCAGGCGGCCTGGATGCGCGCCCACGGCCGCGCCTCTTCCAGCTCGTAGGCCAGCTGCAGCAGCAACGCCTCCTGGCCAA
TGTCGGCCGACAGCATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTEADDAPLGYLLYRVGAALRPEVSGALGPLGLTLPEFVCLRILSMFPGMSSAELSRRAGVTPQAMNTVLRRLQEVGAVA
RPSSVSSGRSLPAHLTGAGCTLLKRAEAAVRGADARILAKLTETQQREFKRMLQKLGSDG

Sequences:

>Translated_140_residues
MTEADDAPLGYLLYRVGAALRPEVSGALGPLGLTLPEFVCLRILSMFPGMSSAELSRRAGVTPQAMNTVLRRLQEVGAVA
RPSSVSSGRSLPAHLTGAGCTLLKRAEAAVRGADARILAKLTETQQREFKRMLQKLGSDG
>Mature_139_residues
TEADDAPLGYLLYRVGAALRPEVSGALGPLGLTLPEFVCLRILSMFPGMSSAELSRRAGVTPQAMNTVLRRLQEVGAVAR
PSSVSSGRSLPAHLTGAGCTLLKRAEAAVRGADARILAKLTETQQREFKRMLQKLGSDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 14850; Mature: 14718

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEADDAPLGYLLYRVGAALRPEVSGALGPLGLTLPEFVCLRILSMFPGMSSAELSRRAG
CCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCC
VTPQAMNTVLRRLQEVGAVARPSSVSSGRSLPAHLTGAGCTLLKRAEAAVRGADARILAK
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHHH
LTETQQREFKRMLQKLGSDG
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TEADDAPLGYLLYRVGAALRPEVSGALGPLGLTLPEFVCLRILSMFPGMSSAELSRRAG
CCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCC
VTPQAMNTVLRRLQEVGAVARPSSVSSGRSLPAHLTGAGCTLLKRAEAAVRGADARILAK
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHHH
LTETQQREFKRMLQKLGSDG
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]