Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is cdsA

Identifier: 41409042

GI number: 41409042

Start: 3279419

End: 3280354

Strand: Reverse

Name: cdsA

Synonym: MAP2944c

Alternate gene names: 41409042

Gene position: 3280354-3279419 (Counterclockwise)

Preceding gene: 41409043

Following gene: 41409041

Centisome position: 67.92

GC content: 70.62

Gene sequence:

>936_bases
GTGGCTACCTCAGATCCCGGTGCAGGCGACGAGCCGGAGCATGCCGTCGAGAACACGACCGAGGGTGCGGCCGGGCAGCG
GGCCAAGAAGAAAACCTCCCGGGCCGGACGTGACCTGCGGGCCGCCATCGCGGTGGGCGCCGGTATCGGCGCCGTGCTCA
TCGTCACGCTGGTGTTCGCGCCCCGCTTCTGGGTGCCGATCGTCGCGATGGCCATCCTGGTCGCCAGCCACGAGGTGGTC
CGCCGGCTGCGCGAGGCCGGATACGTCATCCCGGTCATTCCGTTGCTGGCCGGCGGCCAGCTCACGGTGTGGCTGACCTG
GCCGTTCCACGCCGCCGGCGCGTTGGCCGGCTTCGGCGTCACCGTGGTGGCCTGCCTGTTCTGGCGGTTGTTCATGCAGG
ACAACCGCAAGCGCCCCGAGCCGTTCGCCGGTTCACCCTCGGCGAACTACCTGCGCGACGCGTCGGCCACCGTCTTCCTG
GCCTGCTGGGTGCCGTTGTTCGCCTCCTTCGCCGCCCTGCTGGTCTATCCCGCCGACGGTGCCGGGCGGGTGTTCTGCCT
GATGATCACCGTGGTGGCCTCCGACGTCGGCGGCTACGCCGTGGGCGTGCTGTTCGGCAAGCATCCGATGGTCCCGGCGA
TCAGCCCCAAGAAATCCTGGGAGGGCCTGGCCGGCTCGCTGGTGCTGGGTATCACCGCGGCCACCCTGGCGGCGACTTTT
CTGGCCGGCAAGGCGCCGTGGGTGGGCGCGCTGCTGGGGGTGGTGCTGGTGTTCACCTGCACCCTCGGCGACCTGGTGGA
ATCGCAGGTCAAGCGTGACCTGGGTATCAAGGACATGGGCCGGCTGCTGCCCGGCCACGGCGGCCTGATGGACCGGCTGG
ACGGCGTGCTGCCGTCGGCGGTCGCCGCCTGGACGGTGCTGACGCTCGTTCCGTAG

Upstream 100 bases:

>100_bases
CCCATCAGTACATCACCCAAATCGACGAGCTGGTCAAGCACAAAGAAGGCGAGCTGCTGGAGGTCTAGCGACCATCCGGC
AGCGAAGTTGATTCAGGTCC

Downstream 100 bases:

>100_bases
GCCGGCCCCGGCGATGACCGATACTGGACGGGTCATGGTTCAACAACTGGTGTTCTCCGAGCCGCGCCCCGGTAAGCCGC
CGCGGCACCTGGCCGATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFAPRFWVPIVAMAILVASHEVV
RRLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGVTVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFL
ACWVPLFASFAALLVYPADGAGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATF
LAGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVAAWTVLTLVP

Sequences:

>Translated_311_residues
MATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFAPRFWVPIVAMAILVASHEVV
RRLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGVTVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFL
ACWVPLFASFAALLVYPADGAGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATF
LAGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVAAWTVLTLVP
>Mature_310_residues
ATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFAPRFWVPIVAMAILVASHEVVR
RLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGVTVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFLA
CWVPLFASFAALLVYPADGAGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATFL
AGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVAAWTVLTLVP

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=146, Percent_Identity=39.041095890411, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787677, Length=108, Percent_Identity=37.037037037037, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 32493; Mature: 32361

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFA
CCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHC
PRFWVPIVAMAILVASHEVVRRLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCEEEEEEECCHHHHHHHHHHHH
TVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFLACWVPLFASFAALLVYPADG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCC
AGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATF
CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH
LAGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHH
VAAWTVLTLVP
HHHHHHHHCCC
>Mature Secondary Structure 
ATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFA
CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHC
PRFWVPIVAMAILVASHEVVRRLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCEEEEEEECCHHHHHHHHHHHH
TVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFLACWVPLFASFAALLVYPADG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCC
AGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATF
CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH
LAGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHH
VAAWTVLTLVP
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]