| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409030
Identifier: 41409030
GI number: 41409030
Start: 3266205
End: 3266756
Strand: Reverse
Name: 41409030
Synonym: MAP2932c
Alternate gene names: NA
Gene position: 3266756-3266205 (Counterclockwise)
Preceding gene: 41409031
Following gene: 41409029
Centisome position: 67.64
GC content: 71.56
Gene sequence:
>552_bases ATGATGACCACCCTGGACGGGTTCGGTGTCCCGGTCGTTGTGGCCGGTCCGGAGAACGGCGTCGTCGTCGTCATCCTCGG TGACGAGGATCGCGCGCCCGCGGCCTACGACGCGGTCTGCGAACGGCTGCACACCGCGTCGCTGCGCACGGTGGTGATCG GCTTCGATCCGCGGCTCACCCCCAAATCGGTGATCGGCATCCTCGACGCGCTGGGCATCGGCTGGGCCGTCGTGATGGGT GACCGCGCCGGCGGCGAACTCGCCTGGGAATTGACGGCGACCCGGCTGGGCCGGTTCGTCGGCCTGGTGGTGATCGACCG CGGGCACCCGCGGGCCGCCGACCGCGACGGCGCCATCCGCGATGGGCACTGCCCGCCGGTGGAGATCGGCACCACGGTGT TGGTCAGCTCGCCGGCCGCCCGGGCGGTGGCCCAAGCCAGCCAGCAGTACGTCTACGCCGACTACCGGGTGGTGCACCTG GGGCGGCGCACGGTGCAGGAGTCGACGGCGCAACTGGCCGCCGAGATCATTCTGCGCACCAGCACCTGGTAG
Upstream 100 bases:
>100_bases GTTGTTGACGGCGCGGTCAAAAATCCGCGCCCGCGTATCGGATGCTCGAGAAGCGTCGCGCACACAGGCCGTTTGGCTGT AGCGTGCTTGGGTGTCCTCG
Downstream 100 bases:
>100_bases CCCGCGACGGTCATGGCCAGTGAAGACAGCGCGCTGACCGGTTCCGATACCGCGATGCTCTCGCTCGCCGCGCTGGACCG ACTGGTGGCCGCCGGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MMTTLDGFGVPVVVAGPENGVVVVILGDEDRAPAAYDAVCERLHTASLRTVVIGFDPRLTPKSVIGILDALGIGWAVVMG DRAGGELAWELTATRLGRFVGLVVIDRGHPRAADRDGAIRDGHCPPVEIGTTVLVSSPAARAVAQASQQYVYADYRVVHL GRRTVQESTAQLAAEIILRTSTW
Sequences:
>Translated_183_residues MMTTLDGFGVPVVVAGPENGVVVVILGDEDRAPAAYDAVCERLHTASLRTVVIGFDPRLTPKSVIGILDALGIGWAVVMG DRAGGELAWELTATRLGRFVGLVVIDRGHPRAADRDGAIRDGHCPPVEIGTTVLVSSPAARAVAQASQQYVYADYRVVHL GRRTVQESTAQLAAEIILRTSTW >Mature_183_residues MMTTLDGFGVPVVVAGPENGVVVVILGDEDRAPAAYDAVCERLHTASLRTVVIGFDPRLTPKSVIGILDALGIGWAVVMG DRAGGELAWELTATRLGRFVGLVVIDRGHPRAADRDGAIRDGHCPPVEIGTTVLVSSPAARAVAQASQQYVYADYRVVHL GRRTVQESTAQLAAEIILRTSTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19440; Mature: 19440
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTLDGFGVPVVVAGPENGVVVVILGDEDRAPAAYDAVCERLHTASLRTVVIGFDPRLT CCEECCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCC PKSVIGILDALGIGWAVVMGDRAGGELAWELTATRLGRFVGLVVIDRGHPRAADRDGAIR HHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHEEEEEEEECCCCCCCCCCCCCC DGHCPPVEIGTTVLVSSPAARAVAQASQQYVYADYRVVHLGRRTVQESTAQLAAEIILRT CCCCCCCCCCCEEEEECCHHHHHHHHHCCEEEECEEEEECCHHHHHHHHHHHHHHHHHCC STW CCC >Mature Secondary Structure MMTTLDGFGVPVVVAGPENGVVVVILGDEDRAPAAYDAVCERLHTASLRTVVIGFDPRLT CCEECCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCC PKSVIGILDALGIGWAVVMGDRAGGELAWELTATRLGRFVGLVVIDRGHPRAADRDGAIR HHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHEEEEEEEECCCCCCCCCCCCCC DGHCPPVEIGTTVLVSSPAARAVAQASQQYVYADYRVVHLGRRTVQESTAQLAAEIILRT CCCCCCCCCCCEEEEECCHHHHHHHHHCCEEEECEEEEECCHHHHHHHHHHHHHHHHHCC STW CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA