| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409020
Identifier: 41409020
GI number: 41409020
Start: 3255433
End: 3256467
Strand: Direct
Name: 41409020
Synonym: MAP2922
Alternate gene names: NA
Gene position: 3255433-3256467 (Clockwise)
Preceding gene: 41409010
Following gene: 41409021
Centisome position: 67.4
GC content: 70.63
Gene sequence:
>1035_bases GTGACTGGCGGGGCGGCTGGCTGGGTGCCCGACGTGCTACCCGGCTATTGGCAGCGCACCCTGGCGCTGGGCGCCGATCC GGCCGGCGAGGGCGACATCGTCGCGACCCTGATCCGGCGCGGGGACGACGCGGCGCCGGCCGCCGATCACGCGGTGCTGG CGGTGCACGGGTATACCGACTACTTCTTCCACACCGCGCTGGCCGATCACTTCGCCGCGCGCGGTTTCGCCTTCTACGCG CTGGACCTGCACAAGTGCGGCCGGTCGCGGCGTGACGGGCAGACGCCGCACTTCGTCACCGACCTGGCCAACTACGACAC CGAACTGGAACGCGCGCTGAGCGTGGCGAGCGGGGGAAACCGCAGGGTGCTGGTGTACGGGCATTCGGCCGGCGGGCTGA TCGTGTCGTTGTGGCTGGACCGGCTGCGGCGCCGAAATCCCGTCGCGCACTCCGCAGTTGGCGGTCTGGTGCTCAACAGC CCGTTCCTGGAGCTGCCCGGCCCGCCCATCCTGCGGCACTCGCTGACCGTGGCGCTGATCGCCGGCCTGTCCCGGGTGCG TTCCAAGGGGGTGGCCCGGTCCCCGGTGCAGGGTGGCTACGGCACCACGCTGCACCGCGACTACGGCGGGGAATTCGACT ACAACCTGCAGTGGAAACCCGTTGGCGGCTTTCCGATCACGTTCGGTTGGCTGCACGCAGTGCGCCGCGGTCAGGCCCGA CTGCACCGCGGTCTCGACGTCGGGGTGCCGAACCTGATCCTGCGCTCGGACCACAGCGTGCAGGAGACGCCCGACCCGGC ATCCATGCACCGCGGTGACGCGGTGCTCGACGTCACCCAGATCGCCCGCTGGGCGGGCTGTATCGGCAACCGCAGCACCA TCATTCCGGTCGCCGACGCCAAACACGACGTGTTCTTGTCGTTGCCGGGGCCCCGCGCGGCGGCCTATCGTCAACTGGAT CTGTGGCTGGACGGCTACCTGCGCGACCGGAGCACCGATAGCACCCGGGCCCCGGCGTCCCGGGACGAAGGGTGA
Upstream 100 bases:
>100_bases CTTTTCCTCGAGGCATGCCGATCCTCAGGTTATCCGGTGGCAAAGCGACGCGAACCACGCGCGGGGTCGCCGCGGCCGGC AAAAGCTCTAAGCTGGCGGG
Downstream 100 bases:
>100_bases GGCGCCGAACATGGAAACCTACGACCTCGCGATCATCGGAACCGGTTCGGGCAACAGCCTTCTCGATGCCCGCTTCGCCG GCAAGCGGACCGCCATCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Lysophospholipase; Alpha/Beta Hydrolase Fold Family Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Carboxylic Ester Hydrolase
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTGGAAGWVPDVLPGYWQRTLALGADPAGEGDIVATLIRRGDDAAPAADHAVLAVHGYTDYFFHTALADHFAARGFAFYA LDLHKCGRSRRDGQTPHFVTDLANYDTELERALSVASGGNRRVLVYGHSAGGLIVSLWLDRLRRRNPVAHSAVGGLVLNS PFLELPGPPILRHSLTVALIAGLSRVRSKGVARSPVQGGYGTTLHRDYGGEFDYNLQWKPVGGFPITFGWLHAVRRGQAR LHRGLDVGVPNLILRSDHSVQETPDPASMHRGDAVLDVTQIARWAGCIGNRSTIIPVADAKHDVFLSLPGPRAAAYRQLD LWLDGYLRDRSTDSTRAPASRDEG
Sequences:
>Translated_344_residues MTGGAAGWVPDVLPGYWQRTLALGADPAGEGDIVATLIRRGDDAAPAADHAVLAVHGYTDYFFHTALADHFAARGFAFYA LDLHKCGRSRRDGQTPHFVTDLANYDTELERALSVASGGNRRVLVYGHSAGGLIVSLWLDRLRRRNPVAHSAVGGLVLNS PFLELPGPPILRHSLTVALIAGLSRVRSKGVARSPVQGGYGTTLHRDYGGEFDYNLQWKPVGGFPITFGWLHAVRRGQAR LHRGLDVGVPNLILRSDHSVQETPDPASMHRGDAVLDVTQIARWAGCIGNRSTIIPVADAKHDVFLSLPGPRAAAYRQLD LWLDGYLRDRSTDSTRAPASRDEG >Mature_343_residues TGGAAGWVPDVLPGYWQRTLALGADPAGEGDIVATLIRRGDDAAPAADHAVLAVHGYTDYFFHTALADHFAARGFAFYAL DLHKCGRSRRDGQTPHFVTDLANYDTELERALSVASGGNRRVLVYGHSAGGLIVSLWLDRLRRRNPVAHSAVGGLVLNSP FLELPGPPILRHSLTVALIAGLSRVRSKGVARSPVQGGYGTTLHRDYGGEFDYNLQWKPVGGFPITFGWLHAVRRGQARL HRGLDVGVPNLILRSDHSVQETPDPASMHRGDAVLDVTQIARWAGCIGNRSTIIPVADAKHDVFLSLPGPRAAAYRQLDL WLDGYLRDRSTDSTRAPASRDEG
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37269; Mature: 37138
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGAAGWVPDVLPGYWQRTLALGADPAGEGDIVATLIRRGDDAAPAADHAVLAVHGYTD CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCHH YFFHTALADHFAARGFAFYALDLHKCGRSRRDGQTPHFVTDLANYDTELERALSVASGGN HHHHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC RRVLVYGHSAGGLIVSLWLDRLRRRNPVAHSAVGGLVLNSPFLELPGPPILRHSLTVALI EEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHH AGLSRVRSKGVARSPVQGGYGTTLHRDYGGEFDYNLQWKPVGGFPITFGWLHAVRRGQAR HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH LHRGLDVGVPNLILRSDHSVQETPDPASMHRGDAVLDVTQIARWAGCIGNRSTIIPVADA HHCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC KHDVFLSLPGPRAAAYRQLDLWLDGYLRDRSTDSTRAPASRDEG CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGGAAGWVPDVLPGYWQRTLALGADPAGEGDIVATLIRRGDDAAPAADHAVLAVHGYTD CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCHH YFFHTALADHFAARGFAFYALDLHKCGRSRRDGQTPHFVTDLANYDTELERALSVASGGN HHHHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC RRVLVYGHSAGGLIVSLWLDRLRRRNPVAHSAVGGLVLNSPFLELPGPPILRHSLTVALI EEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHH AGLSRVRSKGVARSPVQGGYGTTLHRDYGGEFDYNLQWKPVGGFPITFGWLHAVRRGQAR HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH LHRGLDVGVPNLILRSDHSVQETPDPASMHRGDAVLDVTQIARWAGCIGNRSTIIPVADA HHCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC KHDVFLSLPGPRAAAYRQLDLWLDGYLRDRSTDSTRAPASRDEG CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA