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The map label for this gene is 41408992

Identifier: 41408992

GI number: 41408992

Start: 3224963

End: 3225214

Strand: Direct

Name: 41408992

Synonym: MAP2894

Alternate gene names: NA

Gene position: 3224963-3225214 (Clockwise)

Preceding gene: 41408986

Following gene: 41408993

Centisome position: 66.77

GC content: 68.25

Gene sequence:

>252_bases
GTGAGGGCTGACGAAGAGCGTGGCGGTCTCACCGCGGTCGGCCAGGACTACCTCAAGGCCATCTGGAATGCCCAGGAGTG
GTCGCCCGAGGGTGCGCCGCAGAAGGTCAGCACCAAGATGCTGGCCGAGAAGATCGGGGTGTCGGCCAGCACCGCCTCCG
AGTCGATCCGCAAACTCGCCGAACAGGGGCTGGTCGACCACGAGAAGTACGGCGCGGTGACCCTGACCGAGGCGGGCCGG
CGCGGCGCTTGA

Upstream 100 bases:

>100_bases
CGGCGCGCGGCCGCCCGCCGGGAGGTCCGCGGCGCGCAACGCCGGGCGAGGTGGCGGGGAACACGCCGGATCGAGGTTGG
GTTGCCTAAACTTTCTCCTT

Downstream 100 bases:

>100_bases
GATGGTGCGCCGGCACCGGCTGCTGGAGACCTTCCTGGTCAACGAGCTGGGCTACGCCTGGGACGAGGTGCACGACGAGG
CGGAGGTGCTCGAGCACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Iron Dependent Repressor; DtxR Family Transcriptional Regulator; DtxR Family Iron Dependent Repressor; Mn-Dependent Transcriptional Regulator; Transcriptional Repressor SirR; Manganese-Dependent Transcriptional Regulator; Iron Dependent Transcriptional Repressor FeoA; Transcriptional Regulator; Metal-Dependent Transcriptional Regulator; Fe(2+)-Dependent Transcriptional Regulator; Dtxr-Like Transcriptional Regulator

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MRADEERGGLTAVGQDYLKAIWNAQEWSPEGAPQKVSTKMLAEKIGVSASTASESIRKLAEQGLVDHEKYGAVTLTEAGR
RGA

Sequences:

>Translated_83_residues
MRADEERGGLTAVGQDYLKAIWNAQEWSPEGAPQKVSTKMLAEKIGVSASTASESIRKLAEQGLVDHEKYGAVTLTEAGR
RGA
>Mature_83_residues
MRADEERGGLTAVGQDYLKAIWNAQEWSPEGAPQKVSTKMLAEKIGVSASTASESIRKLAEQGLVDHEKYGAVTLTEAGR
RGA

Specific function: Unknown

COG id: COG1321

COG function: function code K; Mn-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8903; Mature: 8903

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50944 HTH_DTXR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADEERGGLTAVGQDYLKAIWNAQEWSPEGAPQKVSTKMLAEKIGVSASTASESIRKLA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
EQGLVDHEKYGAVTLTEAGRRGA
HCCCCCCHHCCCEEECCCCCCCC
>Mature Secondary Structure
MRADEERGGLTAVGQDYLKAIWNAQEWSPEGAPQKVSTKMLAEKIGVSASTASESIRKLA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
EQGLVDHEKYGAVTLTEAGRRGA
HCCCCCCHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA