Click here to switch to the map view.

The map label for this gene is 41408975

Identifier: 41408975

GI number: 41408975

Start: 3206454

End: 3206909

Strand: Reverse

Name: 41408975

Synonym: MAP2877c

Alternate gene names: NA

Gene position: 3206909-3206454 (Counterclockwise)

Preceding gene: 41408976

Following gene: 41408974

Centisome position: 66.4

GC content: 73.25

Gene sequence:

>456_bases
ATGAACAAAGCGCTGCGCATCCAACTGCTCGTCGCCTTCCTGTGTGTGGCGCTGGTGGTGTACTTCGCGCTGCTCGGGCG
GGTGGCCATCGCGATGATCGCCTCGGGCCGGGCCGCCGCCGTCGGCCTGGGCGTGGCGGTGCTGATCATGCCCGCCCTCG
GGCTGTGGGCCATGATCGCCACCCTGCGCGCCGGATTCGCCCACCAGAGGCTGGCCCGGCTGATCGCCGCCGACGGCATG
GAGCTGGACACCAGCGCGCTGCCGCGCCGGCCGTCGGGCCGCATCCGGCGCGACGCGGCCGACGCGCTGTTCGCCACCGT
GCGCACCGAGGTGGAAAACCACCCCGACGACTGGCGGCGCTGGTATCGGCTGGCCCGCGCCTACGACTACGCCGGGGACC
GCCGCCGCGCCCGGGAAGCCATGAAGACCGCCGTCGACCTGCAGGGCCACCAGTGA

Upstream 100 bases:

>100_bases
CTGCTGGCGGTGCGGCGCATCAGGGAACACCCGGGCCTGACCGTGGGCCTCGAACCGCTGCTCGACCTGGGCTGAGCAAA
CCGGCTATGAGCAAACGGCT

Downstream 100 bases:

>100_bases
CCGACACACCGAGCAAGACGCTGCTGATCGTGCACCACACGCCGTCGCCGCACACGCACGAGATGTTCGAGGCGGTGGTC
TCCGGCGCCACCGACCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF Z [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNKALRIQLLVAFLCVALVVYFALLGRVAIAMIASGRAAAVGLGVAVLIMPALGLWAMIATLRAGFAHQRLARLIAADGM
ELDTSALPRRPSGRIRRDAADALFATVRTEVENHPDDWRRWYRLARAYDYAGDRRRAREAMKTAVDLQGHQ

Sequences:

>Translated_151_residues
MNKALRIQLLVAFLCVALVVYFALLGRVAIAMIASGRAAAVGLGVAVLIMPALGLWAMIATLRAGFAHQRLARLIAADGM
ELDTSALPRRPSGRIRRDAADALFATVRTEVENHPDDWRRWYRLARAYDYAGDRRRAREAMKTAVDLQGHQ
>Mature_151_residues
MNKALRIQLLVAFLCVALVVYFALLGRVAIAMIASGRAAAVGLGVAVLIMPALGLWAMIATLRAGFAHQRLARLIAADGM
ELDTSALPRRPSGRIRRDAADALFATVRTEVENHPDDWRRWYRLARAYDYAGDRRRAREAMKTAVDLQGHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2 [H]

EC number: NA

Molecular weight: Translated: 16684; Mature: 16684

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKALRIQLLVAFLCVALVVYFALLGRVAIAMIASGRAAAVGLGVAVLIMPALGLWAMIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TLRAGFAHQRLARLIAADGMELDTSALPRRPSGRIRRDAADALFATVRTEVENHPDDWRR
HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
WYRLARAYDYAGDRRRAREAMKTAVDLQGHQ
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKALRIQLLVAFLCVALVVYFALLGRVAIAMIASGRAAAVGLGVAVLIMPALGLWAMIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TLRAGFAHQRLARLIAADGMELDTSALPRRPSGRIRRDAADALFATVRTEVENHPDDWRR
HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
WYRLARAYDYAGDRRRAREAMKTAVDLQGHQ
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8021227 [H]