| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is pgsA3
Identifier: 41408955
GI number: 41408955
Start: 3184058
End: 3184657
Strand: Reverse
Name: pgsA3
Synonym: MAP2857c
Alternate gene names: 41408955
Gene position: 3184657-3184058 (Counterclockwise)
Preceding gene: 41408957
Following gene: 41408954
Centisome position: 65.94
GC content: 68.67
Gene sequence:
>600_bases GTGCCGGGGCAGCCGCAGACGGGTCCGATGGTAGGGCGGGCAAACATCGCCAACCTGGCCAACACGTTGACCCTGCTGCG GCTGGTGTTGGTGCCGGTCTTTCTGCTCGCCCTGTTCGCCGGTGACGGCCACGAGACCGGCTTCCGCATCCTGGCTTTCC TGATCTTCGCGTTCGCCTGCATCACCGATCGGTTGGACGGGCTGCTGGCCCGCAACTACGGGATGGCCACCGAATTCGGC GCGTTCGTCGACCCGATCGCGGACAAGACGCTGGTCGGGTCGGCGCTGATCGGGCTGTCCATGCTCGGCGAGCTGCCGTG GTGGATCACCGTGCTGATCCTGGCCCGCGAATTCGGGGTCACCGTGCTGCGGTTGGCGGTCATCCGCCGGGGCGTGATCC CGGCCAGCTGGGGCGGCAAGCTCAAGACGGTGGTGCAGGTGTTCGCCATCGGTTTGTTCGTGCTGCCGTGGGCGGGCACG CCCGGGCCGTTCCGGGTGGGCGCGGCCGTGGTGATGGGCGCGGCCATCGTGCTCACGGTGATCACCGGGATCGACTACGT GGTCTCGACGGTGCGCGAAGTGCGCCGGACCGCTGCCTGA
Upstream 100 bases:
>100_bases GCGCGTCGAACCAGCGGCCGGTAGCGCTGCGGACTTTCGGTCACGGCTAACAGTATCGGCATCACGGACGGCTGCGCTGG TCAACCGTTATTCTGTTGCG
Downstream 100 bases:
>100_bases TTCGGGGTGATTCGGCATCCCCGAACGGGAACCACCGCGGCCCCGCCGGCGTTCACCTAATTGAGCACCTGCCGGAGGCG AGTGAAGAGGCGTGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPGQPQTGPMVGRANIANLANTLTLLRLVLVPVFLLALFAGDGHETGFRILAFLIFAFACITDRLDGLLARNYGMATEFG AFVDPIADKTLVGSALIGLSMLGELPWWITVLILAREFGVTVLRLAVIRRGVIPASWGGKLKTVVQVFAIGLFVLPWAGT PGPFRVGAAVVMGAAIVLTVITGIDYVVSTVREVRRTAA
Sequences:
>Translated_199_residues MPGQPQTGPMVGRANIANLANTLTLLRLVLVPVFLLALFAGDGHETGFRILAFLIFAFACITDRLDGLLARNYGMATEFG AFVDPIADKTLVGSALIGLSMLGELPWWITVLILAREFGVTVLRLAVIRRGVIPASWGGKLKTVVQVFAIGLFVLPWAGT PGPFRVGAAVVMGAAIVLTVITGIDYVVSTVREVRRTAA >Mature_198_residues PGQPQTGPMVGRANIANLANTLTLLRLVLVPVFLLALFAGDGHETGFRILAFLIFAFACITDRLDGLLARNYGMATEFGA FVDPIADKTLVGSALIGLSMLGELPWWITVLILAREFGVTVLRLAVIRRGVIPASWGGKLKTVVQVFAIGLFVLPWAGTP GPFRVGAAVVMGAAIVLTVITGIDYVVSTVREVRRTAA
Specific function: This Protein Catalyzes The Committed Step To The Synthesis Of The Acidic Phospholipids. [C]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=140, Percent_Identity=37.1428571428571, Blast_Score=85, Evalue=3e-18, Organism=Drosophila melanogaster, GI24650130, Length=106, Percent_Identity=39.622641509434, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24650126, Length=106, Percent_Identity=39.622641509434, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24650128, Length=106, Percent_Identity=39.622641509434, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21160; Mature: 21028
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGQPQTGPMVGRANIANLANTLTLLRLVLVPVFLLALFAGDGHETGFRILAFLIFAFAC CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ITDRLDGLLARNYGMATEFGAFVDPIADKTLVGSALIGLSMLGELPWWITVLILAREFGV HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TVLRLAVIRRGVIPASWGGKLKTVVQVFAIGLFVLPWAGTPGPFRVGAAVVMGAAIVLTV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ITGIDYVVSTVREVRRTAA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PGQPQTGPMVGRANIANLANTLTLLRLVLVPVFLLALFAGDGHETGFRILAFLIFAFAC CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ITDRLDGLLARNYGMATEFGAFVDPIADKTLVGSALIGLSMLGELPWWITVLILAREFGV HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TVLRLAVIRRGVIPASWGGKLKTVVQVFAIGLFVLPWAGTPGPFRVGAAVVMGAAIVLTV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ITGIDYVVSTVREVRRTAA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036; 10889206 [H]