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The map label for this gene is 41408954

Identifier: 41408954

GI number: 41408954

Start: 3183604

End: 3183930

Strand: Reverse

Name: 41408954

Synonym: MAP2856c

Alternate gene names: NA

Gene position: 3183930-3183604 (Counterclockwise)

Preceding gene: 41408955

Following gene: 41408953

Centisome position: 65.92

GC content: 72.17

Gene sequence:

>327_bases
ATGCCGCCATTGGTGCGCGAGGTCATCGGCGACGTACTGCGCGAGGCCCGCACGACGCAAGGCCGGACACTGCGCGAGGT
GTCCGATACGGCGCGGGTGAGCCTCGGCTACCTGTCCGAGGTGGAACGCGGCCGCAAGGAGCCGTCCAGCGAGCTGCTCA
ACGCGATCTGCGACGCGCTGGACGTCCCGTTGTCGTCGGTGCTCACCGACGCCGGCGAGCGGATGGCCAGCGAGGAACGC
GCGGCCGTCGCCGCACCGGCCGGCCCCAGCATCGACGCCAGCACCAAGGTCGTCATCCCGCCGGTGGCCAGCCTGGCGCT
GGCCTGA

Upstream 100 bases:

>100_bases
GGAACCACCGCGGCCCCGCCGGCGTTCACCTAATTGAGCACCTGCCGGAGGCGAGTGAAGAGGCGTGCCGCGCAGGGCCG
ACTGGACGAAGGAGGGCGGG

Downstream 100 bases:

>100_bases
GCGGCGGGATCCCCGCAAGGGGTACGGCGATCGGCGCCGACCCACTAAATTGAGCGACAGGCGTGGAGCCTTTTCAGGGC
CGCCGCGGCCCCTCGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Protein; Transcription Regulator; Transcriptional Regulator ClgR; HTH_3 Family Transcriptional Regulator; Helix-Turn-Helix XRE-Family Like Proteins; Trancriptional Regulator PopR-Like Protein; Transcriptional Regulatory Protein; PopR Protein; Transcriptional Regulator XRE Family Protein

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MPPLVREVIGDVLREARTTQGRTLREVSDTARVSLGYLSEVERGRKEPSSELLNAICDALDVPLSSVLTDAGERMASEER
AAVAAPAGPSIDASTKVVIPPVASLALA

Sequences:

>Translated_108_residues
MPPLVREVIGDVLREARTTQGRTLREVSDTARVSLGYLSEVERGRKEPSSELLNAICDALDVPLSSVLTDAGERMASEER
AAVAAPAGPSIDASTKVVIPPVASLALA
>Mature_107_residues
PPLVREVIGDVLREARTTQGRTLREVSDTARVSLGYLSEVERGRKEPSSELLNAICDALDVPLSSVLTDAGERMASEERA
AVAAPAGPSIDASTKVVIPPVASLALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11339; Mature: 11208

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLVREVIGDVLREARTTQGRTLREVSDTARVSLGYLSEVERGRKEPSSELLNAICDAL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DVPLSSVLTDAGERMASEERAAVAAPAGPSIDASTKVVIPPVASLALA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHCC
>Mature Secondary Structure 
PPLVREVIGDVLREARTTQGRTLREVSDTARVSLGYLSEVERGRKEPSSELLNAICDAL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DVPLSSVLTDAGERMASEERAAVAAPAGPSIDASTKVVIPPVASLALA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA