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The map label for this gene is trkA

Identifier: 41408906

GI number: 41408906

Start: 3140338

End: 3141003

Strand: Direct

Name: trkA

Synonym: MAP2808

Alternate gene names: 41408906

Gene position: 3140338-3141003 (Clockwise)

Preceding gene: 41408903

Following gene: 41408907

Centisome position: 65.02

GC content: 71.47

Gene sequence:

>666_bases
GTGCGTGTAGTGGTGATGGGCTGCGGCCGGGTCGGGTCCTCGGTCGCCGACGGGCTGTCGCGCATCGGTCACGACGTCGC
GGTCATCGACCGCGACAGCACCGCCTTCAACCGGCTCAGCCCCGAATACGCCGGCGAGCGGGTGCTGGGCCAGGGGTTCG
ACCGGGATGTGCTGCTAAGGGCCGGCATCGAGGAGGCCGACGCGTTCGCCGCGGTGTCCTCGGGCGACAACTCCAACATC
ATCTCGGCGCGGCTGGCCCGCGAGACGTTCGGCGTCAAGCGGGTGGTGGCCCGCATCTACGACGCCAAGCGCGCCGAGGT
CTACGAGCGCCTCGGCATTCCCACCATCGCGACCGTGCCCTGGACCACCGACCGGCTGCTCAACGCGCTGCTGCGGGAGA
CCCAGACGGCCAAGTGGCGCGACCCGACCGGCACCGTCGCCGTGTCCGAGGTCGTGTTGCACGAGGACTGGATCGGGCAC
CGGGTCACCGATCTCGAGCAGGCCACCGGCGCCCGGGTCGCGTTCTTGATCCGGTTCGGGTCGGGCGTGCTGCCCGAGCC
CAAGTCGGTGATCCAGGCCGGCGACCAGGTGTACGTGGCGGCGATATCGGGCCGCGCGGCCGAGGCGGCGGCCATCGCCG
CGCTACCGCCGAGCGAAGACCTGTGA

Upstream 100 bases:

>100_bases
ATGCCGGTAGCGTTCGTAGGCGAGAATGTTCGCCGACCGAAACGGCTTGCCGACGTGCGTTGCCGGTGACGGCGCCAGAC
GCGGCCGAGAGGATCTGGAT

Downstream 100 bases:

>100_bases
ACCACGAGGAGCGGCGCACATGAAGACCGCCGACGACGAAGGAGCCGGCTTGCCCCATGGGCAAGCCGGGTACGAGGAGC
GGCGCAAATGAAGGTAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRVVVMGCGRVGSSVADGLSRIGHDVAVIDRDSTAFNRLSPEYAGERVLGQGFDRDVLLRAGIEEADAFAAVSSGDNSNI
ISARLARETFGVKRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALLRETQTAKWRDPTGTVAVSEVVLHEDWIGH
RVTDLEQATGARVAFLIRFGSGVLPEPKSVIQAGDQVYVAAISGRAAEAAAIAALPPSEDL

Sequences:

>Translated_221_residues
MRVVVMGCGRVGSSVADGLSRIGHDVAVIDRDSTAFNRLSPEYAGERVLGQGFDRDVLLRAGIEEADAFAAVSSGDNSNI
ISARLARETFGVKRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALLRETQTAKWRDPTGTVAVSEVVLHEDWIGH
RVTDLEQATGARVAFLIRFGSGVLPEPKSVIQAGDQVYVAAISGRAAEAAAIAALPPSEDL
>Mature_221_residues
MRVVVMGCGRVGSSVADGLSRIGHDVAVIDRDSTAFNRLSPEYAGERVLGQGFDRDVLLRAGIEEADAFAAVSSGDNSNI
ISARLARETFGVKRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALLRETQTAKWRDPTGTVAVSEVVLHEDWIGH
RVTDLEQATGARVAFLIRFGSGVLPEPKSVIQAGDQVYVAAISGRAAEAAAIAALPPSEDL

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=215, Percent_Identity=23.7209302325581, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 23683; Mature: 23683

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVVMGCGRVGSSVADGLSRIGHDVAVIDRDSTAFNRLSPEYAGERVLGQGFDRDVLLR
CEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCHHHHHCCHHHHCCHHHHCCCCHHHHHH
AGIEEADAFAAVSSGDNSNIISARLARETFGVKRVVARIYDAKRAEVYERLGIPTIATVP
CCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
WTTDRLLNALLRETQTAKWRDPTGTVAVSEVVLHEDWIGHRVTDLEQATGARVAFLIRFG
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEEC
SGVLPEPKSVIQAGDQVYVAAISGRAAEAAAIAALPPSEDL
CCCCCCCHHHHHCCCEEEEEEECCCCCHHEEEEECCCCCCC
>Mature Secondary Structure
MRVVVMGCGRVGSSVADGLSRIGHDVAVIDRDSTAFNRLSPEYAGERVLGQGFDRDVLLR
CEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCHHHHHCCHHHHCCHHHHCCCCHHHHHH
AGIEEADAFAAVSSGDNSNIISARLARETFGVKRVVARIYDAKRAEVYERLGIPTIATVP
CCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
WTTDRLLNALLRETQTAKWRDPTGTVAVSEVVLHEDWIGHRVTDLEQATGARVAFLIRFG
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEEC
SGVLPEPKSVIQAGDQVYVAAISGRAAEAAAIAALPPSEDL
CCCCCCCHHHHHCCCEEEEEEECCCCCHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953; 2294088 [H]