| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is arsA
Identifier: 41408903
GI number: 41408903
Start: 3135643
End: 3136932
Strand: Direct
Name: arsA
Synonym: MAP2805
Alternate gene names: 41408903
Gene position: 3135643-3136932 (Clockwise)
Preceding gene: 41408902
Following gene: 41408906
Centisome position: 64.92
GC content: 66.67
Gene sequence:
>1290_bases ATGAGCGTCATCGCGATTGCGGTGTTCGTGGTGGCCTACGCCCTGATCGCCAGCGATCGCGTCAACAAGACGTTCGTCGC GCTGGCCGGCGCCGCGGTGGTCATCACGTTGCCGATGATCCGTTCGGACGACGTCTTCTACTCGCGCGAGACCGGAATCG ATTGGGACGTAATCTTTTTGCTGCTCGGCATGATGATCATCGTCAGCGTGCTGCGCCAAACCGGTGTCTTCGAGTATGTC GCGATCTGGTCGGCCAAGCGGGCCCGGGGTTCCCCGCTGCGCGTCATGATCCTGCTGGTGCTGGTGACCGCGCTCGCGTC GGCCCTGCTGGACAACGTGACCACGGTGTTGCTGATCGCCCCGGTGACCCTGCTGGTGTGCGATCGCCTGGCGATCACCG CGGCCCCGTTCCTGATGGCCGAGGTGTTCGCGTCGAACGTCGGCGGCGCGGCGACGTTGGTCGGCGACCCGCCCAACATC ATCATCGCCAGCAGGGGCGGGCTGAGTTTCAACGACTTCCTGGTTCATCTGGCTCCCATCGTGGTCATCGTCGTCGGCGT GCTGATTGCGTTGCTGCCCAGGCTTTTTCCCGGAGCCTTCACCGTCGATCCCGAGCGGGTGGCCGACGTGATGTCGCTGG AGGAAAAGGAGGCCATCCGCGATCCCCGGTTGCTGGTCACCTGCGGGGTGGTCTTGCTGGCGGTGTTCGCGGCGTTCATC GCCCACGGGCCGCTGCACCTGGAACCCTCGCTGGTGGCACTGTTGGGCGCCGGCATCCTGGTGGTGGCGTCGCGGTTGCA GCCCGCCGACTACCTGTCCGGCGTGGAGTGGGACACGCTGCTGTTTTTCGCCGGCCTGTTCGTCATGGTCGGCGCCCTGG TGAAGACCGGCGTCGTCAAACACCTTGCCCGCCTGGCGATCACCGCCACCGGCGGCAACACCCTGACCGCGACGATGGTC ATCCTCGTCGCGTCGGTCGTCATCAGCGGGATCGTCGACAACGTCCCGTACGCCGCGACGATGGCGCCGGTGGTCGCCGA CCTGGTGCCGGCCCTGGGCGATCACGCCAACCCCGCGGTGTTGTGGTGGTCGCTGGCGCTGGGCACGGACTTCGGCGGCA ACCTCACCGCGATCGGCGCCAGCGCCAACATCGTGCTGCTCGGGATCGCCCGCCGGGCCGACAATCCGATCTCCTTCTGG GAGTTCACCCGCAAGGGCGTGGTGGTCACCGCGGTCTCGGTCGCGCTGTCCGCGCTGTATCTGTGGCTGCGCTATTTCGT GTGGGGCTGA
Upstream 100 bases:
>100_bases CCGCTCGTCGCGGTGGTCAAGGACGGCCGGCTGATCGGGGTGATCACCGCATCGCGGGTGCTCGGGGCGGCGCTGCGGCC TTGAATCGGGTGGGACATAG
Downstream 100 bases:
>100_bases TTCGGCGTCGAGCGTGGGGCCTGGGTACGAACCTCGTTCGTTTTTCGTCCATACCCCCCACGCTCGGCGAGTGCGAAACT CACCGCGTCAGCAGCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSVIAIAVFVVAYALIASDRVNKTFVALAGAAVVITLPMIRSDDVFYSRETGIDWDVIFLLLGMMIIVSVLRQTGVFEYV AIWSAKRARGSPLRVMILLVLVTALASALLDNVTTVLLIAPVTLLVCDRLAITAAPFLMAEVFASNVGGAATLVGDPPNI IIASRGGLSFNDFLVHLAPIVVIVVGVLIALLPRLFPGAFTVDPERVADVMSLEEKEAIRDPRLLVTCGVVLLAVFAAFI AHGPLHLEPSLVALLGAGILVVASRLQPADYLSGVEWDTLLFFAGLFVMVGALVKTGVVKHLARLAITATGGNTLTATMV ILVASVVISGIVDNVPYAATMAPVVADLVPALGDHANPAVLWWSLALGTDFGGNLTAIGASANIVLLGIARRADNPISFW EFTRKGVVVTAVSVALSALYLWLRYFVWG
Sequences:
>Translated_429_residues MSVIAIAVFVVAYALIASDRVNKTFVALAGAAVVITLPMIRSDDVFYSRETGIDWDVIFLLLGMMIIVSVLRQTGVFEYV AIWSAKRARGSPLRVMILLVLVTALASALLDNVTTVLLIAPVTLLVCDRLAITAAPFLMAEVFASNVGGAATLVGDPPNI IIASRGGLSFNDFLVHLAPIVVIVVGVLIALLPRLFPGAFTVDPERVADVMSLEEKEAIRDPRLLVTCGVVLLAVFAAFI AHGPLHLEPSLVALLGAGILVVASRLQPADYLSGVEWDTLLFFAGLFVMVGALVKTGVVKHLARLAITATGGNTLTATMV ILVASVVISGIVDNVPYAATMAPVVADLVPALGDHANPAVLWWSLALGTDFGGNLTAIGASANIVLLGIARRADNPISFW EFTRKGVVVTAVSVALSALYLWLRYFVWG >Mature_428_residues SVIAIAVFVVAYALIASDRVNKTFVALAGAAVVITLPMIRSDDVFYSRETGIDWDVIFLLLGMMIIVSVLRQTGVFEYVA IWSAKRARGSPLRVMILLVLVTALASALLDNVTTVLLIAPVTLLVCDRLAITAAPFLMAEVFASNVGGAATLVGDPPNII IASRGGLSFNDFLVHLAPIVVIVVGVLIALLPRLFPGAFTVDPERVADVMSLEEKEAIRDPRLLVTCGVVLLAVFAAFIA HGPLHLEPSLVALLGAGILVVASRLQPADYLSGVEWDTLLFFAGLFVMVGALVKTGVVKHLARLAITATGGNTLTATMVI LVASVVISGIVDNVPYAATMAPVVADLVPALGDHANPAVLWWSLALGTDFGGNLTAIGASANIVLLGIARRADNPISFWE FTRKGVVVTAVSVALSALYLWLRYFVWG
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Homo sapiens, GI157266326, Length=215, Percent_Identity=35.3488372093023, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI1787039, Length=364, Percent_Identity=25.2747252747253, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082277, Length=384, Percent_Identity=26.3020833333333, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550608, Length=482, Percent_Identity=31.1203319502075, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI85724998, Length=468, Percent_Identity=25.8547008547009, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI62484377, Length=468, Percent_Identity=25.6410256410256, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24581759, Length=189, Percent_Identity=39.6825396825397, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI28574683, Length=189, Percent_Identity=39.6825396825397, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI28574681, Length=189, Percent_Identity=39.6825396825397, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI28574685, Length=189, Percent_Identity=39.6825396825397, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI28574678, Length=189, Percent_Identity=39.6825396825397, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI19920704, Length=189, Percent_Identity=39.6825396825397, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI221472711, Length=222, Percent_Identity=30.1801801801802, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24581764, Length=222, Percent_Identity=30.1801801801802, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI24656008, Length=467, Percent_Identity=23.1263383297645, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 - InterPro: IPR004680 [H]
Pfam domain/function: PF03600 CitMHS [H]
EC number: NA
Molecular weight: Translated: 45287; Mature: 45156
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIAIAVFVVAYALIASDRVNKTFVALAGAAVVITLPMIRSDDVFYSRETGIDWDVIFL CHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCCCEEECCCCCCHHHHHH LLGMMIIVSVLRQTGVFEYVAIWSAKRARGSPLRVMILLVLVTALASALLDNVTTVLLIA HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVTLLVCDRLAITAAPFLMAEVFASNVGGAATLVGDPPNIIIASRGGLSFNDFLVHLAPI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHH VVIVVGVLIALLPRLFPGAFTVDPERVADVMSLEEKEAIRDPRLLVTCGVVLLAVFAAFI HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AHGPLHLEPSLVALLGAGILVVASRLQPADYLSGVEWDTLLFFAGLFVMVGALVKTGVVK CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLARLAITATGGNTLTATMVILVASVVISGIVDNVPYAATMAPVVADLVPALGDHANPAV HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCE LWWSLALGTDFGGNLTAIGASANIVLLGIARRADNPISFWEFTRKGVVVTAVSVALSALY EEEEHHHCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHH LWLRYFVWG HHHHHHHCC >Mature Secondary Structure SVIAIAVFVVAYALIASDRVNKTFVALAGAAVVITLPMIRSDDVFYSRETGIDWDVIFL HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCCCEEECCCCCCHHHHHH LLGMMIIVSVLRQTGVFEYVAIWSAKRARGSPLRVMILLVLVTALASALLDNVTTVLLIA HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVTLLVCDRLAITAAPFLMAEVFASNVGGAATLVGDPPNIIIASRGGLSFNDFLVHLAPI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHH VVIVVGVLIALLPRLFPGAFTVDPERVADVMSLEEKEAIRDPRLLVTCGVVLLAVFAAFI HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AHGPLHLEPSLVALLGAGILVVASRLQPADYLSGVEWDTLLFFAGLFVMVGALVKTGVVK CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLARLAITATGGNTLTATMVILVASVVISGIVDNVPYAATMAPVVADLVPALGDHANPAV HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCE LWWSLALGTDFGGNLTAIGASANIVLLGIARRADNPISFWEFTRKGVVVTAVSVALSALY EEEEHHHCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHH LWLRYFVWG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]