| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408890
Identifier: 41408890
GI number: 41408890
Start: 3121846
End: 3123426
Strand: Direct
Name: 41408890
Synonym: MAP2792
Alternate gene names: NA
Gene position: 3121846-3123426 (Clockwise)
Preceding gene: 41408889
Following gene: 41408891
Centisome position: 64.64
GC content: 72.61
Gene sequence:
>1581_bases GTGCTAGCTACTGTGGTCGGCATGAGTCGGCCCCACCCGTGCGCCACGATCCTGGTGGCGGTGACCGCGTTGCTCGCCGG CTGCGTCCCGGGCCTGGCCGCCGACCCGCGCTTCGCCACCAATTCCGGCGCGCGGCCCCAGGGCGCGGCCACCTCCAAGC CGGCGCCGGGCGGCCCGCCGCCGCTCGCCGCCCCGAAAAACGACCTGGCCTGGCACGACTGCACGTCCCGGGTGTTCGCC GACGCGGCCGTCCCGCCCGCCCCCGGCATCCAGCTGGATTGCGCGAACTACGACGCCGACCTGGACCCGGTCAACGGCGG GGGCGGTGCCCTGAGCATCGGCGTGGTGCGCGCCCGGTCGAATCAGACACCCCGCGACGCGGGCCCGCTGGTGTTCACCA CCGGCTCGGACCTGCCGTCGTCGGCGCAGCTGCCGGTGTGGCTGTCGCGGGCCGGCGCCGACGTGCTGGCCGCGCACCCG ATCGTCGCCGTCGACCGCCGCGGCATCGGCATGTCCAGCCCCATCGACTGCCGGGACAAGTTCGACCGCCAGCAGATGCG TGATCAGTCGCAATTCCAGGCCGGTGACGACCCGGTGGCCAACCTGTCCGAGGTCGCCAACACCGCCACCACCAATTGCA CCGACGCGATCGCGCCGGGGGCGTCGGCCTACGACGACGCGCACGCCGCCTCCGATATCGAGCGGTTGCGCAGCACCTGG GACGTGCCCGCGCTGGCGCTGATCGGGATCGGCAACGGCGCCCAGGTGGCGCTGGCCTACGCCGGGTCGCGTCCGGACAA GGTGGCCCGGTTGATCCTCGACTCCCCGGTCGCGTTGGGCGTCAACGCCGAAGCCGCCGCCGAGCAACAGGTCAAGGGAC AGCAGGCCGCGCTGGACGCCTTCGCGGCCCAGTGCATCGCGGTGAACTGCGCGCTGGGCCCCGACCCCAAGGGCGCGGTC AGCGCGCTGCTCGCCGACGCCCGCGCCGGCAAGGGACCCGGCGGCGTGTCGGTGGCACAGGTGGCCAACGCGATCACCGT CGCGCTGGGCTTCCCGTCCGGCGGGCGCGTCAACGCCACCACCGACCTGGCCAACGCGCTGGCCAGCGCCCGCTCCGGCG ACACCAACGCGCTGAACAACCTGATCAACCACGCCAACGCGATGCAGGACTCGGACGGCCAGTTCGTCAACGTCTGCAGC GACGCGGTCAACCGCCCGACGCCGGACCGGGTGCGCGAGCTGGTGGTGGCCTGGGGCAAGCTCTATCCGCAGTTCGGGAC CGTCGCCGCGCTCAACATGGTCAAGTGCGTGCACTGGCCCACCGGCTCGCCGCCGCCGTCGCCGAAGAGCCTCAAGGTCG ACGTGCTGCTGCTCGGCGTGCAGAACGACCCGATCGTCGGCACCGACGGGGTGGCGGCGACCGCGGCGGGGATCATCAAC GCCAACGCGGCCAGCAAGCGGGTGATGTGGCAGGGCATCGGACACGGCGCCAGTATCTATTCGGGCTGCGCGGTTCCGCC GCTGATCGGCTACCTGGGCAGCGGCAAATTGCCCAACACCGACACCTACTGCCCGGCCTGA
Upstream 100 bases:
>100_bases CCCGGCGCATCGCCACCGGGCCGGGCCAGCTGCTCACCCGGATGCGCTGCGCGCACGTGCTGACCGACGACGCCGGCTAC CTGTACACCCGCTACGTCAG
Downstream 100 bases:
>100_bases CGCTGCTTTCGGATCGCCCGGCGCGCCGGTGTACGGTGCGCTGGTGACGGCAGCTGAATCGACCGGCTTGCGTGATTGGA TCCAGGCCGCCTTTCGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: TAP Domain-Containing Protein; Proteinase; Peptidase; Hydrolase; Secreted Protease; TAP Domain Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Family Protein; Peptidase/Hydrolase; Tripeptidyl-Peptidase B
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MLATVVGMSRPHPCATILVAVTALLAGCVPGLAADPRFATNSGARPQGAATSKPAPGGPPPLAAPKNDLAWHDCTSRVFA DAAVPPAPGIQLDCANYDADLDPVNGGGGALSIGVVRARSNQTPRDAGPLVFTTGSDLPSSAQLPVWLSRAGADVLAAHP IVAVDRRGIGMSSPIDCRDKFDRQQMRDQSQFQAGDDPVANLSEVANTATTNCTDAIAPGASAYDDAHAASDIERLRSTW DVPALALIGIGNGAQVALAYAGSRPDKVARLILDSPVALGVNAEAAAEQQVKGQQAALDAFAAQCIAVNCALGPDPKGAV SALLADARAGKGPGGVSVAQVANAITVALGFPSGGRVNATTDLANALASARSGDTNALNNLINHANAMQDSDGQFVNVCS DAVNRPTPDRVRELVVAWGKLYPQFGTVAALNMVKCVHWPTGSPPPSPKSLKVDVLLLGVQNDPIVGTDGVAATAAGIIN ANAASKRVMWQGIGHGASIYSGCAVPPLIGYLGSGKLPNTDTYCPA
Sequences:
>Translated_526_residues MLATVVGMSRPHPCATILVAVTALLAGCVPGLAADPRFATNSGARPQGAATSKPAPGGPPPLAAPKNDLAWHDCTSRVFA DAAVPPAPGIQLDCANYDADLDPVNGGGGALSIGVVRARSNQTPRDAGPLVFTTGSDLPSSAQLPVWLSRAGADVLAAHP IVAVDRRGIGMSSPIDCRDKFDRQQMRDQSQFQAGDDPVANLSEVANTATTNCTDAIAPGASAYDDAHAASDIERLRSTW DVPALALIGIGNGAQVALAYAGSRPDKVARLILDSPVALGVNAEAAAEQQVKGQQAALDAFAAQCIAVNCALGPDPKGAV SALLADARAGKGPGGVSVAQVANAITVALGFPSGGRVNATTDLANALASARSGDTNALNNLINHANAMQDSDGQFVNVCS DAVNRPTPDRVRELVVAWGKLYPQFGTVAALNMVKCVHWPTGSPPPSPKSLKVDVLLLGVQNDPIVGTDGVAATAAGIIN ANAASKRVMWQGIGHGASIYSGCAVPPLIGYLGSGKLPNTDTYCPA >Mature_526_residues MLATVVGMSRPHPCATILVAVTALLAGCVPGLAADPRFATNSGARPQGAATSKPAPGGPPPLAAPKNDLAWHDCTSRVFA DAAVPPAPGIQLDCANYDADLDPVNGGGGALSIGVVRARSNQTPRDAGPLVFTTGSDLPSSAQLPVWLSRAGADVLAAHP IVAVDRRGIGMSSPIDCRDKFDRQQMRDQSQFQAGDDPVANLSEVANTATTNCTDAIAPGASAYDDAHAASDIERLRSTW DVPALALIGIGNGAQVALAYAGSRPDKVARLILDSPVALGVNAEAAAEQQVKGQQAALDAFAAQCIAVNCALGPDPKGAV SALLADARAGKGPGGVSVAQVANAITVALGFPSGGRVNATTDLANALASARSGDTNALNNLINHANAMQDSDGQFVNVCS DAVNRPTPDRVRELVVAWGKLYPQFGTVAALNMVKCVHWPTGSPPPSPKSLKVDVLLLGVQNDPIVGTDGVAATAAGIIN ANAASKRVMWQGIGHGASIYSGCAVPPLIGYLGSGKLPNTDTYCPA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53341; Mature: 53341
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATVVGMSRPHPCATILVAVTALLAGCVPGLAADPRFATNSGARPQGAATSKPAPGGPP CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLAAPKNDLAWHDCTSRVFADAAVPPAPGIQLDCANYDADLDPVNGGGGALSIGVVRARS CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECC NQTPRDAGPLVFTTGSDLPSSAQLPVWLSRAGADVLAAHPIVAVDRRGIGMSSPIDCRDK CCCCCCCCCEEEECCCCCCCCCCCCEEEHHCCCCHHHCCCEEEECCCCCCCCCCCCHHHH FDRQQMRDQSQFQAGDDPVANLSEVANTATTNCTDAIAPGASAYDDAHAASDIERLRSTW HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHC DVPALALIGIGNGAQVALAYAGSRPDKVARLILDSPVALGVNAEAAAEQQVKGQQAALDA CCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHH FAAQCIAVNCALGPDPKGAVSALLADARAGKGPGGVSVAQVANAITVALGFPSGGRVNAT HHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCEEEEEEECCCCCCCCCH TDLANALASARSGDTNALNNLINHANAMQDSDGQFVNVCSDAVNRPTPDRVRELVVAWGK HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH LYPQFGTVAALNMVKCVHWPTGSPPPSPKSLKVDVLLLGVQNDPIVGTDGVAATAAGIIN HCCCHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHC ANAASKRVMWQGIGHGASIYSGCAVPPLIGYLGSGKLPNTDTYCPA CCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLATVVGMSRPHPCATILVAVTALLAGCVPGLAADPRFATNSGARPQGAATSKPAPGGPP CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLAAPKNDLAWHDCTSRVFADAAVPPAPGIQLDCANYDADLDPVNGGGGALSIGVVRARS CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECC NQTPRDAGPLVFTTGSDLPSSAQLPVWLSRAGADVLAAHPIVAVDRRGIGMSSPIDCRDK CCCCCCCCCEEEECCCCCCCCCCCCEEEHHCCCCHHHCCCEEEECCCCCCCCCCCCHHHH FDRQQMRDQSQFQAGDDPVANLSEVANTATTNCTDAIAPGASAYDDAHAASDIERLRSTW HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHC DVPALALIGIGNGAQVALAYAGSRPDKVARLILDSPVALGVNAEAAAEQQVKGQQAALDA CCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHH FAAQCIAVNCALGPDPKGAVSALLADARAGKGPGGVSVAQVANAITVALGFPSGGRVNAT HHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCEEEEEEECCCCCCCCCH TDLANALASARSGDTNALNNLINHANAMQDSDGQFVNVCSDAVNRPTPDRVRELVVAWGK HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH LYPQFGTVAALNMVKCVHWPTGSPPPSPKSLKVDVLLLGVQNDPIVGTDGVAATAAGIIN HCCCHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHC ANAASKRVMWQGIGHGASIYSGCAVPPLIGYLGSGKLPNTDTYCPA CCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA