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The map label for this gene is ribD

Identifier: 41408889

GI number: 41408889

Start: 3121088

End: 3121852

Strand: Direct

Name: ribD

Synonym: MAP2791

Alternate gene names: 41408889

Gene position: 3121088-3121852 (Clockwise)

Preceding gene: 41408887

Following gene: 41408890

Centisome position: 64.62

GC content: 72.55

Gene sequence:

>765_bases
ATGGCCCTTCCGGAGACGCCGCTGTCGCTGCTGGGGTCGGTACGCGAGGTCGACGACGGCGAACTCCCCGGCCTGTACGA
CTATCCCGACGGGCACGCCGGAACCTGGGTGCGGGCCAACTTCATCGCCAGCGTCGACGGCGGCGCCACCGCCGACGGCA
GCAGTGGCGCCATGGGCGGGCCGGGCGACCGGTTCGTCTTCAACCTGCTGCGCGAACTCGCCGACGTCATCGTGGTGGGG
GCGGGCACCGTGCGCATCGAGGGCTACTCCGGCGCGCAGCTCGGCGTCGCCCAGCGTCAGCAGCGCCAGGCCCGCGGCCA
GAGCGAGGTCCCGCCGCTGGGGATCGTGACCAAATCCGGCCACCTGAACCGGGACATGGCGGTGTTCACCCGCACCGAGG
TGCCGCCGCTGGTGCTCACCTGCGCCGCGGCCGCCGACCAGACCCGCCGGCTGCTCAGCGGCCTGTGCGAGGTGCTGGAC
TGCTCGGCCGGCGACCCGGAGCGGGTCGACGAGGCCACCATGCTGGCCCTGCTCGGCAAGCGCGGGATGCGGCGCATCCT
CACCGAAGGCGGTCCGACGCTGCTGAATTCGTTGCTCGAACGCCAACTGCTGGACGAGCTGTGCCTGACCATCGCGCCCT
ACCTCGTCGGCGGCCACGCCCGGCGCATCGCCACCGGGCCGGGCCAGCTGCTCACCCGGATGCGCTGCGCGCACGTGCTG
ACCGACGACGCCGGCTACCTGTACACCCGCTACGTCAGGTGCTAG

Upstream 100 bases:

>100_bases
CGTGGGATGCCGGTCCACCAGGTGCGCCACACCGGCCGACGCGGACGCGGAGCCGGACCCGTGCATGCACGCACTGTAAC
CGCGTGCTGCAATCAGACGC

Downstream 100 bases:

>100_bases
CTACTGTGGTCGGCATGAGTCGGCCCCACCCGTGCGCCACGATCCTGGTGGCGGTGACCGCGTTGCTCGCCGGCTGCGTC
CCGGGCCTGGCCGCCGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: HTP reductase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MALPETPLSLLGSVREVDDGELPGLYDYPDGHAGTWVRANFIASVDGGATADGSSGAMGGPGDRFVFNLLRELADVIVVG
AGTVRIEGYSGAQLGVAQRQQRQARGQSEVPPLGIVTKSGHLNRDMAVFTRTEVPPLVLTCAAAADQTRRLLSGLCEVLD
CSAGDPERVDEATMLALLGKRGMRRILTEGGPTLLNSLLERQLLDELCLTIAPYLVGGHARRIATGPGQLLTRMRCAHVL
TDDAGYLYTRYVRC

Sequences:

>Translated_254_residues
MALPETPLSLLGSVREVDDGELPGLYDYPDGHAGTWVRANFIASVDGGATADGSSGAMGGPGDRFVFNLLRELADVIVVG
AGTVRIEGYSGAQLGVAQRQQRQARGQSEVPPLGIVTKSGHLNRDMAVFTRTEVPPLVLTCAAAADQTRRLLSGLCEVLD
CSAGDPERVDEATMLALLGKRGMRRILTEGGPTLLNSLLERQLLDELCLTIAPYLVGGHARRIATGPGQLLTRMRCAHVL
TDDAGYLYTRYVRC
>Mature_253_residues
ALPETPLSLLGSVREVDDGELPGLYDYPDGHAGTWVRANFIASVDGGATADGSSGAMGGPGDRFVFNLLRELADVIVVGA
GTVRIEGYSGAQLGVAQRQQRQARGQSEVPPLGIVTKSGHLNRDMAVFTRTEVPPLVLTCAAAADQTRRLLSGLCEVLDC
SAGDPERVDEATMLALLGKRGMRRILTEGGPTLLNSLLERQLLDELCLTIAPYLVGGHARRIATGPGQLLTRMRCAHVLT
DDAGYLYTRYVRC

Specific function: Converts 2,5-Diamino-6-(Ribosylamino)-4(3h)-Pyrimidinone 5'-Phosphate Into 5-Amino-6-(Ribosylamino)-2,4(1h,3h)- Pyrimidinedione 5'-Phosphate. [C]

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HTP reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006401
- InterPro:   IPR011549
- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: =1.1.1.193 [H]

Molecular weight: Translated: 27088; Mature: 26957

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPETPLSLLGSVREVDDGELPGLYDYPDGHAGTWVRANFIASVDGGATADGSSGAMGG
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
PGDRFVFNLLRELADVIVVGAGTVRIEGYSGAQLGVAQRQQRQARGQSEVPPLGIVTKSG
CHHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCC
HLNRDMAVFTRTEVPPLVLTCAAAADQTRRLLSGLCEVLDCSAGDPERVDEATMLALLGK
CCCCCCEEEECCCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RGMRRILTEGGPTLLNSLLERQLLDELCLTIAPYLVGGHARRIATGPGQLLTRMRCAHVL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHH
TDDAGYLYTRYVRC
CCCCCHHHHHEECC
>Mature Secondary Structure 
ALPETPLSLLGSVREVDDGELPGLYDYPDGHAGTWVRANFIASVDGGATADGSSGAMGG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
PGDRFVFNLLRELADVIVVGAGTVRIEGYSGAQLGVAQRQQRQARGQSEVPPLGIVTKSG
CHHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCC
HLNRDMAVFTRTEVPPLVLTCAAAADQTRRLLSGLCEVLDCSAGDPERVDEATMLALLGK
CCCCCCEEEECCCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RGMRRILTEGGPTLLNSLLERQLLDELCLTIAPYLVGGHARRIATGPGQLLTRMRCAHVL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHH
TDDAGYLYTRYVRC
CCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]