| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ucpA [C]
Identifier: 41408878
GI number: 41408878
Start: 3111674
End: 3112495
Strand: Direct
Name: ucpA [C]
Synonym: MAP2780
Alternate gene names: 41408878
Gene position: 3111674-3112495 (Clockwise)
Preceding gene: 41408877
Following gene: 41408879
Centisome position: 64.43
GC content: 69.34
Gene sequence:
>822_bases ATGGCAACCGACGGCGCGACGGGCCGGGTCGCCGGCAAACGGGTCCTCATCACCGGCGCCGCGCGGGGCATGGGACGCTC GCACGCGGTGCGGCTGGCCGAACAGGGCGCCGACTGCATCCTGGTCGACATCTGCTGCACCCCAACGGGTTTGGACTACC CGCTGGCCACCGAGGAGGACCTGAACGAGACGGTGCGACTGGTGGAGAAGCACGGCAGCCGGGCCGTGCCCAAGATCGTC GATGTGCGCGACGAGGCCGCCATGAAGGCGGCGGTCGACGCGGCCGTCGACGAGCTCGGCGGGCTCGACGGCGCGGTCGC CAACGCGGGTGTGCTCACCGTGGGCACCTGGGACACCACCACCGCCGAGCAGTGGCGGCTGGTCCTCGACGTCAACCTGA TCGGGGCCTGGAACACCTGCGCGGCCGCGCTCCCGCACCTGATCGGCGGGGGCGGCGGCAGCCTGGTCAACATCAGCTCG TCGGCCGGCATCAAGGGAACCCCGCTGCATCTGCCCTACACGGCGTCCAAGCACGGCATCGTGGGGATGACGCTCGCGCT GGCCAATGAGCTTGCCGCACAGAACATTCGCGTCAACACCGTGCATCCCACCGGGGTGGCCACCGGGATGGCGCCGCCGG GCATGCACGCGTTGATCGCCGAACAGCGGCCCGATCTGGTGCCCATCTTCCTCAACGCGCTGCCCGCGCCGCTGATCGAG GCGTCCGACGTGAGCAACGCGGTGCTCTACCTGATCTCCGACGAATCCCGTTACGTCACAGGACTCGAGCTGAAGGTCGA TGCCGGTGTCACGATCAGATAG
Upstream 100 bases:
>100_bases GACGTCAGCGCCGCCATCGCCTACCTGGTCTCCGACGAGGCCCGCTACGTCACCGGGGTGACGTTCCCGGTCGATGCCGG CTTCTGCAACAAGGTCTGAC
Downstream 100 bases:
>100_bases CGCGGCGCGGCATCAGCGCGGGGTGCGCACCTTCGCCGAGGTGATGACCTTCGACCCGCCGGACGACGCCAGCCCCTGCG CCTCGGGGCTGATCGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MATDGATGRVAGKRVLITGAARGMGRSHAVRLAEQGADCILVDICCTPTGLDYPLATEEDLNETVRLVEKHGSRAVPKIV DVRDEAAMKAAVDAAVDELGGLDGAVANAGVLTVGTWDTTTAEQWRLVLDVNLIGAWNTCAAALPHLIGGGGGSLVNISS SAGIKGTPLHLPYTASKHGIVGMTLALANELAAQNIRVNTVHPTGVATGMAPPGMHALIAEQRPDLVPIFLNALPAPLIE ASDVSNAVLYLISDESRYVTGLELKVDAGVTIR
Sequences:
>Translated_273_residues MATDGATGRVAGKRVLITGAARGMGRSHAVRLAEQGADCILVDICCTPTGLDYPLATEEDLNETVRLVEKHGSRAVPKIV DVRDEAAMKAAVDAAVDELGGLDGAVANAGVLTVGTWDTTTAEQWRLVLDVNLIGAWNTCAAALPHLIGGGGGSLVNISS SAGIKGTPLHLPYTASKHGIVGMTLALANELAAQNIRVNTVHPTGVATGMAPPGMHALIAEQRPDLVPIFLNALPAPLIE ASDVSNAVLYLISDESRYVTGLELKVDAGVTIR >Mature_272_residues ATDGATGRVAGKRVLITGAARGMGRSHAVRLAEQGADCILVDICCTPTGLDYPLATEEDLNETVRLVEKHGSRAVPKIVD VRDEAAMKAAVDAAVDELGGLDGAVANAGVLTVGTWDTTTAEQWRLVLDVNLIGAWNTCAAALPHLIGGGGGSLVNISSS AGIKGTPLHLPYTASKHGIVGMTLALANELAAQNIRVNTVHPTGVATGMAPPGMHALIAEQRPDLVPIFLNALPAPLIEA SDVSNAVLYLISDESRYVTGLELKVDAGVTIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254986, Length=204, Percent_Identity=33.8235294117647, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI40254992, Length=268, Percent_Identity=29.8507462686567, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI4504505, Length=203, Percent_Identity=31.5270935960591, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI32483357, Length=276, Percent_Identity=28.9855072463768, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI15277342, Length=268, Percent_Identity=29.8507462686567, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI31542939, Length=260, Percent_Identity=30.3846153846154, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI7705925, Length=263, Percent_Identity=31.1787072243346, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4758504, Length=279, Percent_Identity=29.3906810035842, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI19923817, Length=270, Percent_Identity=24.8148148148148, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI210032110, Length=204, Percent_Identity=28.4313725490196, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI142976729, Length=239, Percent_Identity=27.1966527196653, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI66933014, Length=269, Percent_Identity=27.5092936802974, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI310128830, Length=261, Percent_Identity=29.5019157088123, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI310115468, Length=261, Percent_Identity=29.5019157088123, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI59889578, Length=208, Percent_Identity=30.2884615384615, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI224922801, Length=191, Percent_Identity=32.9842931937173, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI40807363, Length=205, Percent_Identity=30.7317073170732, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI10190704, Length=257, Percent_Identity=27.2373540856031, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI83715985, Length=195, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI126723191, Length=205, Percent_Identity=29.7560975609756, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI7706318, Length=212, Percent_Identity=25.4716981132075, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI302344755, Length=109, Percent_Identity=39.4495412844037, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI87082100, Length=270, Percent_Identity=32.962962962963, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789208, Length=268, Percent_Identity=32.089552238806, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI2367175, Length=259, Percent_Identity=32.8185328185328, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1787335, Length=262, Percent_Identity=29.7709923664122, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87082160, Length=265, Percent_Identity=28.3018867924528, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=29.5719844357977, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788459, Length=259, Percent_Identity=30.5019305019305, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786812, Length=272, Percent_Identity=27.2058823529412, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790717, Length=263, Percent_Identity=27.7566539923954, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787905, Length=266, Percent_Identity=27.0676691729323, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1787526, Length=260, Percent_Identity=30, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788891, Length=229, Percent_Identity=29.6943231441048, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786701, Length=212, Percent_Identity=28.7735849056604, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71982365, Length=203, Percent_Identity=33.0049261083744, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17544670, Length=279, Percent_Identity=29.7491039426523, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI25147288, Length=266, Percent_Identity=30.4511278195489, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI115534694, Length=261, Percent_Identity=31.4176245210728, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI193203117, Length=223, Percent_Identity=31.390134529148, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17568967, Length=221, Percent_Identity=28.5067873303167, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17558628, Length=203, Percent_Identity=34.9753694581281, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193203115, Length=223, Percent_Identity=31.390134529148, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560676, Length=280, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17562904, Length=282, Percent_Identity=28.0141843971631, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17561402, Length=271, Percent_Identity=26.9372693726937, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17555706, Length=275, Percent_Identity=28.3636363636364, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17564282, Length=223, Percent_Identity=30.4932735426009, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71994600, Length=263, Percent_Identity=29.6577946768061, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71994604, Length=263, Percent_Identity=30.4182509505703, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17562906, Length=284, Percent_Identity=27.4647887323944, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17559104, Length=275, Percent_Identity=29.0909090909091, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=27.6752767527675, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17562908, Length=281, Percent_Identity=27.7580071174377, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17560150, Length=280, Percent_Identity=27.1428571428571, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538480, Length=278, Percent_Identity=26.978417266187, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538182, Length=268, Percent_Identity=29.4776119402985, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17562910, Length=276, Percent_Identity=26.8115942028986, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17560220, Length=282, Percent_Identity=28.0141843971631, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17531453, Length=284, Percent_Identity=29.2253521126761, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17562990, Length=280, Percent_Identity=26.4285714285714, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=27.363184079602, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17563726, Length=274, Percent_Identity=26.6423357664234, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=240, Percent_Identity=30, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322227, Length=206, Percent_Identity=29.6116504854369, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6324126, Length=193, Percent_Identity=28.4974093264249, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322226, Length=200, Percent_Identity=28.5, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644339, Length=263, Percent_Identity=33.8403041825095, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI21357673, Length=203, Percent_Identity=31.5270935960591, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI18859837, Length=230, Percent_Identity=30.4347826086957, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI28571526, Length=263, Percent_Identity=30.0380228136882, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21357041, Length=260, Percent_Identity=31.5384615384615, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24643142, Length=263, Percent_Identity=30.7984790874525, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24640492, Length=220, Percent_Identity=27.7272727272727, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI17737361, Length=236, Percent_Identity=33.4745762711864, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI23397609, Length=264, Percent_Identity=29.5454545454545, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI21355319, Length=273, Percent_Identity=27.8388278388278, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24581726, Length=258, Percent_Identity=25.5813953488372, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI281364892, Length=210, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24665243, Length=269, Percent_Identity=27.8810408921933, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221331218, Length=269, Percent_Identity=27.8810408921933, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24665247, Length=270, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI221331216, Length=270, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 28177; Mature: 28045
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDGATGRVAGKRVLITGAARGMGRSHAVRLAEQGADCILVDICCTPTGLDYPLATEED CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHH LNETVRLVEKHGSRAVPKIVDVRDEAAMKAAVDAAVDELGGLDGAVANAGVLTVGTWDTT HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCC TAEQWRLVLDVNLIGAWNTCAAALPHLIGGGGGSLVNISSSAGIKGTPLHLPYTASKHGI CHHHEEEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEECCCCCCCCCE VGMTLALANELAAQNIRVNTVHPTGVATGMAPPGMHALIAEQRPDLVPIFLNALPAPLIE EEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEHHHHCCCCCCCC ASDVSNAVLYLISDESRYVTGLELKVDAGVTIR CCCCCCEEEEEEECCCCEEEEEEEEECCCCEEC >Mature Secondary Structure ATDGATGRVAGKRVLITGAARGMGRSHAVRLAEQGADCILVDICCTPTGLDYPLATEED CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHH LNETVRLVEKHGSRAVPKIVDVRDEAAMKAAVDAAVDELGGLDGAVANAGVLTVGTWDTT HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCC TAEQWRLVLDVNLIGAWNTCAAALPHLIGGGGGSLVNISSSAGIKGTPLHLPYTASKHGI CHHHEEEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEECCCCCCCCCE VGMTLALANELAAQNIRVNTVHPTGVATGMAPPGMHALIAEQRPDLVPIFLNALPAPLIE EEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEHHHHCCCCCCCC ASDVSNAVLYLISDESRYVTGLELKVDAGVTIR CCCCCCEEEEEEECCCCEEEEEEEEECCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA