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The map label for this gene is 41408873

Identifier: 41408873

GI number: 41408873

Start: 3106772

End: 3107659

Strand: Direct

Name: 41408873

Synonym: MAP2775

Alternate gene names: NA

Gene position: 3106772-3107659 (Clockwise)

Preceding gene: 41408868

Following gene: 41408877

Centisome position: 64.33

GC content: 74.32

Gene sequence:

>888_bases
ATGGCCGCGCGTCCCTCGCCCCAAACCGAGCGGGTGGTGAACCTGTTCGAGCTGCTGGCGGCCGACGGCAGCGCGGGGAT
CACCCTGGCCGAGGTGTCCCGGCGGTTGCACGTGCACAAGGCCAGTTGCCACTCGATGCTGTCCGAACTGCTGCGGGCCG
GCTGGCTCCTGCGCGACCCGGTGCGCAAGACCTACCACCTGGGCCCGGCCCTGGTGCGGCTCGGCCGCGAGGCCGCCGCC
CGCTACCCGGCCCCGGTGCTGGCCCGCTCGGTGATGGACGAGCTGGCGGCGGCGACGGGCGCGCACTGCGTGGCGTTCTC
GGTGAGCGAGGACTACTCCACCGTCGTCGATCAGGTCCGCAGCCGCCGCGGCGGCGGGCACCCGATGCCGATCGGCACCC
AGTTCCCGCACCGCCCGCCGTACGGGGCGTCGACGGTCGCCTGGGCGGGAACCGAGGACCGGGAGCGCTGGCTGGCCGCC
CTGCCCGACGAGGTGCGCGACCGCTACCGCGAGGCCATCGCCGCCGCCCGGCAGCGCGGCTACGCGGTGGGCCTGCACCT
GCTGCCCGACCTGCGGCTGCAGGAACTGGCGCTGCTGGTGCGCAGCGCCGAGGTGCGATCCACCCGGCTGAGCCAGCTGG
CGCAGGCGCTGACCGACGAGCTCATCCACCAGGAGGAGTGGTTCCCGATCAGCCTGGCCCCCGACCGCAGCTACGAGGTG
AGCCACATCGACTCCCCGATCCTGGGGCCGGGCCCGAGCATCGCGTTGATGCTCAGCCTGGTGCCCAGCGCCGAGCCGAT
GAGCGGCGCGGCGGTCACCCGGCTGGGTACCCAGCTGGCCGCCGCGACCCGCCGGCTGAGCGAAGCCCTTGCCGACGAGT
CCGGTTAA

Upstream 100 bases:

>100_bases
GATCACCGCCACCTTGCCCTGCAGGTCCGTCATGGTGTGGCCATCGTCACACGGTCGCACAGAGCACCACAAGCGTTCGC
ATTATGCGACCATTGCCGGC

Downstream 100 bases:

>100_bases
CCGCGTTGCGGCGCCAGCCGCTTGAGCGCCAGCCCGCCTTCGAAGGGCCGGTAGCCGAACGCGGCCGGGGCGCGATAGCC
GGTGTCCGGCACCGGGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator IclR Family; Regulatory Proteins IclR; Regulatory Protein IclR; Transcription Regulator Protein; IclR Family Regulatory Protein; Transcriptional Regulator PadR Family Protein; IclR Helix-Turn-Helix Domain Family Protein; Iclr Family Transcriptional Regulator

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MAARPSPQTERVVNLFELLAADGSAGITLAEVSRRLHVHKASCHSMLSELLRAGWLLRDPVRKTYHLGPALVRLGREAAA
RYPAPVLARSVMDELAAATGAHCVAFSVSEDYSTVVDQVRSRRGGGHPMPIGTQFPHRPPYGASTVAWAGTEDRERWLAA
LPDEVRDRYREAIAAARQRGYAVGLHLLPDLRLQELALLVRSAEVRSTRLSQLAQALTDELIHQEEWFPISLAPDRSYEV
SHIDSPILGPGPSIALMLSLVPSAEPMSGAAVTRLGTQLAAATRRLSEALADESG

Sequences:

>Translated_295_residues
MAARPSPQTERVVNLFELLAADGSAGITLAEVSRRLHVHKASCHSMLSELLRAGWLLRDPVRKTYHLGPALVRLGREAAA
RYPAPVLARSVMDELAAATGAHCVAFSVSEDYSTVVDQVRSRRGGGHPMPIGTQFPHRPPYGASTVAWAGTEDRERWLAA
LPDEVRDRYREAIAAARQRGYAVGLHLLPDLRLQELALLVRSAEVRSTRLSQLAQALTDELIHQEEWFPISLAPDRSYEV
SHIDSPILGPGPSIALMLSLVPSAEPMSGAAVTRLGTQLAAATRRLSEALADESG
>Mature_294_residues
AARPSPQTERVVNLFELLAADGSAGITLAEVSRRLHVHKASCHSMLSELLRAGWLLRDPVRKTYHLGPALVRLGREAAAR
YPAPVLARSVMDELAAATGAHCVAFSVSEDYSTVVDQVRSRRGGGHPMPIGTQFPHRPPYGASTVAWAGTEDRERWLAAL
PDEVRDRYREAIAAARQRGYAVGLHLLPDLRLQELALLVRSAEVRSTRLSQLAQALTDELIHQEEWFPISLAPDRSYEVS
HIDSPILGPGPSIALMLSLVPSAEPMSGAAVTRLGTQLAAATRRLSEALADESG

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32008; Mature: 31877

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARPSPQTERVVNLFELLAADGSAGITLAEVSRRLHVHKASCHSMLSELLRAGWLLRDP
CCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VRKTYHLGPALVRLGREAAARYPAPVLARSVMDELAAATGAHCVAFSVSEDYSTVVDQVR
HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
SRRGGGHPMPIGTQFPHRPPYGASTVAWAGTEDRERWLAALPDEVRDRYREAIAAARQRG
HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCC
YAVGLHLLPDLRLQELALLVRSAEVRSTRLSQLAQALTDELIHQEEWFPISLAPDRSYEV
CEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
SHIDSPILGPGPSIALMLSLVPSAEPMSGAAVTRLGTQLAAATRRLSEALADESG
HHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AARPSPQTERVVNLFELLAADGSAGITLAEVSRRLHVHKASCHSMLSELLRAGWLLRDP
CCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VRKTYHLGPALVRLGREAAARYPAPVLARSVMDELAAATGAHCVAFSVSEDYSTVVDQVR
HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
SRRGGGHPMPIGTQFPHRPPYGASTVAWAGTEDRERWLAALPDEVRDRYREAIAAARQRG
HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCC
YAVGLHLLPDLRLQELALLVRSAEVRSTRLSQLAQALTDELIHQEEWFPISLAPDRSYEV
CEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
SHIDSPILGPGPSIALMLSLVPSAEPMSGAAVTRLGTQLAAATRRLSEALADESG
HHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA