| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fabG5_1
Identifier: 41408834
GI number: 41408834
Start: 3069407
End: 3070201
Strand: Direct
Name: fabG5_1
Synonym: MAP2736
Alternate gene names: 41408834
Gene position: 3069407-3070201 (Clockwise)
Preceding gene: 41408833
Following gene: 41408835
Centisome position: 63.55
GC content: 73.46
Gene sequence:
>795_bases ATGACCGGCTGGCTTGACGGCAAGCGCGCCCTCGTCGTCGGCGCGGGGTCGGGAATCGGGCGCGCCGTCGTCGACGCCTT CGCCGCCGAGGGCGCGAAAGTCGCTGCGCTGGAACGCGATAGCGACAAGTGCGACCGGCTGCGCCGGCAGCTGCCCGAGG TGGCCGTCGCCGAGGGCGACGCCACCACCCGCCAGGCCAACGAACGGGCCGTGGCGCTCGCGGTGGACACCTTCGGCGGG CTGGACACCCTGGTCAACTGCGTCGGGGTGTTCGACTTCTACCGCGGGGTGGCCGACATCGACGCGGGCGCGCTCGCCGA CGCGTTCGACGAGATGTTTCGCACCAACGTGCTGAGCCACCTGCAGTCGGTTAAGGCGGCGCTGCCCGCGCTGCGGGCCG CCGGTGCTTCCTCGATCGTGCTGACCGAGTCCGCATCGTCGTTCTATCCGGGCCGCGGCGGGGTGCTCTACGTGTCGTCG AAATTCGCGGTGCGCGGGCTGGTTTCGGCGTTGGCGCACGAGCTGGCGCCGGGGATCCGGGTCAACGGCGTGGCCCCGGG CGGCACGCTGGGCACCGACCTGCGCGGCCTGGCCAGCCTGGGGCTGCAGGGCACCCGCCTGGACGACGCCCCGGACCGGG CGGCCGAGGTGGCCGCCCGCACTCCCCTGCGGGTCGCGCTGTCCGGCGCCGACCATGCCTGGAGTTTCGTGTTCCTGGCC TCCGACCGGTCCCGCGGCATCACCGGCGAAACCGTAAGGCCCGACGGCGGATTCGGGCTGGGGACGCCCCGGTGA
Upstream 100 bases:
>100_bases CTGGAGGTCGAGGCGCTGACCTGGCAGAACCCCCGCACGCTGGCCGCCATGGTGGGCAACGGCCAGGCGCCGCTGCTGCC CGACGAACCGGAGGACGGCG
Downstream 100 bases:
>100_bases GCGGCCGGCTGGACGAGCAGCGCGCCCTGGTGGCGCAGGGCTGCCGGATGGCGGCGGCCCGCGGCCTGGTCGACGGCATC CTCGGGCATGTGAGCCTGCG
Product: 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
Products: NA
Alternate protein names: Cis-benzene glycol dehydrogenase [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTGWLDGKRALVVGAGSGIGRAVVDAFAAEGAKVAALERDSDKCDRLRRQLPEVAVAEGDATTRQANERAVALAVDTFGG LDTLVNCVGVFDFYRGVADIDAGALADAFDEMFRTNVLSHLQSVKAALPALRAAGASSIVLTESASSFYPGRGGVLYVSS KFAVRGLVSALAHELAPGIRVNGVAPGGTLGTDLRGLASLGLQGTRLDDAPDRAAEVAARTPLRVALSGADHAWSFVFLA SDRSRGITGETVRPDGGFGLGTPR
Sequences:
>Translated_264_residues MTGWLDGKRALVVGAGSGIGRAVVDAFAAEGAKVAALERDSDKCDRLRRQLPEVAVAEGDATTRQANERAVALAVDTFGG LDTLVNCVGVFDFYRGVADIDAGALADAFDEMFRTNVLSHLQSVKAALPALRAAGASSIVLTESASSFYPGRGGVLYVSS KFAVRGLVSALAHELAPGIRVNGVAPGGTLGTDLRGLASLGLQGTRLDDAPDRAAEVAARTPLRVALSGADHAWSFVFLA SDRSRGITGETVRPDGGFGLGTPR >Mature_263_residues TGWLDGKRALVVGAGSGIGRAVVDAFAAEGAKVAALERDSDKCDRLRRQLPEVAVAEGDATTRQANERAVALAVDTFGGL DTLVNCVGVFDFYRGVADIDAGALADAFDEMFRTNVLSHLQSVKAALPALRAAGASSIVLTESASSFYPGRGGVLYVSSK FAVRGLVSALAHELAPGIRVNGVAPGGTLGTDLRGLASLGLQGTRLDDAPDRAAEVAARTPLRVALSGADHAWSFVFLAS DRSRGITGETVRPDGGFGLGTPR
Specific function: Converts Cis-3-(3-Carboxyethyl)-3,5-Cyclohexadiene-1,2- Diol (Pp-Dihydrodiol) Into 3-(2,3-Dihydroxylphenyl)Propionate (Dhpp). [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=266, Percent_Identity=31.203007518797, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI7705925, Length=263, Percent_Identity=33.4600760456274, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI126723191, Length=211, Percent_Identity=32.2274881516588, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4504505, Length=199, Percent_Identity=30.6532663316583, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI33667109, Length=272, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1788891, Length=241, Percent_Identity=37.344398340249, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1789378, Length=267, Percent_Identity=29.9625468164794, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=27.5193798449612, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787905, Length=263, Percent_Identity=26.615969581749, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787335, Length=261, Percent_Identity=29.8850574712644, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI87082100, Length=271, Percent_Identity=29.8892988929889, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71994604, Length=263, Percent_Identity=31.5589353612167, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994600, Length=270, Percent_Identity=27.4074074074074, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561402, Length=261, Percent_Identity=27.9693486590038, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=29.1044776119403, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17562910, Length=276, Percent_Identity=27.536231884058, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17563726, Length=272, Percent_Identity=28.3088235294118, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17562908, Length=197, Percent_Identity=28.9340101522843, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17560676, Length=274, Percent_Identity=26.6423357664234, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=27.3408239700375, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560332, Length=273, Percent_Identity=27.8388278388278, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=27.5092936802974, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17560150, Length=271, Percent_Identity=28.7822878228782, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17538480, Length=280, Percent_Identity=26.4285714285714, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17562904, Length=280, Percent_Identity=25.7142857142857, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17551412, Length=280, Percent_Identity=26.4285714285714, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17559104, Length=188, Percent_Identity=27.6595744680851, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=271, Percent_Identity=28.4132841328413, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI23397609, Length=266, Percent_Identity=30.4511278195489, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI21355319, Length=259, Percent_Identity=28.957528957529, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24644339, Length=273, Percent_Identity=27.8388278388278, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI28571526, Length=281, Percent_Identity=29.1814946619217, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017711 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.19 [H]
Molecular weight: Translated: 27195; Mature: 27064
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWLDGKRALVVGAGSGIGRAVVDAFAAEGAKVAALERDSDKCDRLRRQLPEVAVAEGD CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHEECCCC ATTRQANERAVALAVDTFGGLDTLVNCVGVFDFYRGVADIDAGALADAFDEMFRTNVLSH CHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LQSVKAALPALRAAGASSIVLTESASSFYPGRGGVLYVSSKFAVRGLVSALAHELAPGIR HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCE VNGVAPGGTLGTDLRGLASLGLQGTRLDDAPDRAAEVAARTPLRVALSGADHAWSFVFLA EECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEEE SDRSRGITGETVRPDGGFGLGTPR CCCCCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure TGWLDGKRALVVGAGSGIGRAVVDAFAAEGAKVAALERDSDKCDRLRRQLPEVAVAEGD CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHEECCCC ATTRQANERAVALAVDTFGGLDTLVNCVGVFDFYRGVADIDAGALADAFDEMFRTNVLSH CHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LQSVKAALPALRAAGASSIVLTESASSFYPGRGGVLYVSSKFAVRGLVSALAHELAPGIR HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCE VNGVAPGGTLGTDLRGLASLGLQGTRLDDAPDRAAEVAARTPLRVALSGADHAWSFVFLA EECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEEE SDRSRGITGETVRPDGGFGLGTPR CCCCCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3667527 [H]