Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408819

Identifier: 41408819

GI number: 41408819

Start: 3057850

End: 3058350

Strand: Direct

Name: 41408819

Synonym: MAP2721

Alternate gene names: NA

Gene position: 3057850-3058350 (Clockwise)

Preceding gene: 41408815

Following gene: 41408825

Centisome position: 63.31

GC content: 72.46

Gene sequence:

>501_bases
GTGGACCTACGAGCGCTCGAGGAACTTCCGCTGACCTATTCCGAGGTGGGGGCCACGGCCTCCGGCGACCTGCCCGCCGG
ATATCACCATCAACACGTCGAGCGCCAAATCGGTACGGGCGCAGAGCGTTTCGAGCAGGCCGCCGGGGCGGTGCTGCGTT
GGGGCATGCAGCGCGGCTCGGGGCTGCGGGTGCAGGCCAGCTCCGAGGTGGCCGTCGTTGACGCCGTGGTGGTGGTGCGG
CTGGGGTTTGTGCCCGCCCCCTGCCGCGTCGTCTACGTCGTCGACGAACCCGACATCCGCGGCTTCGGCTACGGCACGCT
GCCGGGCCATCCGGAGTCCGGCGAGGAACGCTTCGTGGTCCGCCACGACCCGGCCACGTCCGCGGTGTACGCGGAGGTGA
CGGCGTTCTCCCGGCCCGCAACCTGGTGGGCCAGGGCCGGCGGGCCGGTGCTGCGGGTCGGTCAGCGCGTCATCGCCCGG
CGCTACCTGCGCGCGGTGTAG

Upstream 100 bases:

>100_bases
TCAACGTTCCGGATGCCTGGGCAATAGTCTGTGGCGCGCTCACCCCTCCGACCGTACCCGCCGAACCTCGCCGCGCGCCC
CGGCGTGGCAAGCTGGCCGG

Downstream 100 bases:

>100_bases
CCACCGCGGTTTCGCCGCCGAGCGTCACGCCAGCGTGGCGACCGCCTCCGAGCGTCACGCCAGCGTGACGACCGCCGCCG
AGCGTCACGAGCCCCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MDLRALEELPLTYSEVGATASGDLPAGYHHQHVERQIGTGAERFEQAAGAVLRWGMQRGSGLRVQASSEVAVVDAVVVVR
LGFVPAPCRVVYVVDEPDIRGFGYGTLPGHPESGEERFVVRHDPATSAVYAEVTAFSRPATWWARAGGPVLRVGQRVIAR
RYLRAV

Sequences:

>Translated_166_residues
MDLRALEELPLTYSEVGATASGDLPAGYHHQHVERQIGTGAERFEQAAGAVLRWGMQRGSGLRVQASSEVAVVDAVVVVR
LGFVPAPCRVVYVVDEPDIRGFGYGTLPGHPESGEERFVVRHDPATSAVYAEVTAFSRPATWWARAGGPVLRVGQRVIAR
RYLRAV
>Mature_166_residues
MDLRALEELPLTYSEVGATASGDLPAGYHHQHVERQIGTGAERFEQAAGAVLRWGMQRGSGLRVQASSEVAVVDAVVVVR
LGFVPAPCRVVYVVDEPDIRGFGYGTLPGHPESGEERFVVRHDPATSAVYAEVTAFSRPATWWARAGGPVLRVGQRVIAR
RYLRAV

Specific function: Unknown

COG id: COG4762

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0548 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018960
- InterPro:   IPR014457 [H]

Pfam domain/function: PF09348 DUF1990 [H]

EC number: NA

Molecular weight: Translated: 18022; Mature: 18022

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRALEELPLTYSEVGATASGDLPAGYHHQHVERQIGTGAERFEQAAGAVLRWGMQRGS
CCCCHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
GLRVQASSEVAVVDAVVVVRLGFVPAPCRVVYVVDEPDIRGFGYGTLPGHPESGEERFVV
CEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
RHDPATSAVYAEVTAFSRPATWWARAGGPVLRVGQRVIARRYLRAV
EECCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLRALEELPLTYSEVGATASGDLPAGYHHQHVERQIGTGAERFEQAAGAVLRWGMQRGS
CCCCHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
GLRVQASSEVAVVDAVVVVRLGFVPAPCRVVYVVDEPDIRGFGYGTLPGHPESGEERFVV
CEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
RHDPATSAVYAEVTAFSRPATWWARAGGPVLRVGQRVIARRYLRAV
EECCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]