| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408792
Identifier: 41408792
GI number: 41408792
Start: 3029482
End: 3030537
Strand: Direct
Name: 41408792
Synonym: MAP2694
Alternate gene names: NA
Gene position: 3029482-3030537 (Clockwise)
Preceding gene: 41408791
Following gene: 41408798
Centisome position: 62.73
GC content: 70.17
Gene sequence:
>1056_bases GTGACGGCGGTTGATGACAGTAAGGATGGTTTTTCGATGACGGCTCCTCCCGGCGGTATCTACGGCCCGGGGTCCTACGG AAGCAATCCGTATGGGCAGGAGCCGAATTGGGGCGGCCAGCCACCAGGCGGCCAGCCACCAGGCGGTCAGCCACAGGGCG GCCCCTATCCGCAGCCCGGGCAGTATCCGGCCGGCGGTCCGTATCCCTACCCGCCGCCGGGCGGCGGCTACCCGTACCCG GGTGGCCCCTACCCGGGCGGCCCGTACCCGGGTGCGCCGTATCCCGGTCCCGGACAGCCGTTCGGGCCCGGCGGGCCCTA CTCGCCGGGACCGCCGCCCGGCGGCCCCGGCTCCAAGTTGCCCTGGCTGATCGTCGCCGGGCTGGTCGTGCTGGCGGTGA TCGCGCTGGTGGCCACCCTGGTGGTGATGAAGGGCGGGCACGGCAGCAAGCCGTCCGGCGCCACGCCGTCGTCCACCAGC ACCTCGGTGTCGCAGCCGAAGAACTCGGCGCAGAACGCCACCGATTGCACCCCGAACGTGTCCGGCGGCGACATGCCCCG GTCCGACTCCATCGCCGCGGGCAAGCTTTCGTTCCCGGCCAACGCGGCGCCGTCGGGGTGGACGGTGTTCTCCGACGACC AGGGCCCGAACCTGATCGGTGCGCTGGGCGTGGCCCAGGATGTGCCGGGGGCCAACCAGTGGATGATGACCGCCGAGGTC GGCGTCACCAACTTCGTCCCCAGCATGGACCTCACCGCGCAGGCCACCAAACTGATGCAGTGCCTGGCCAACGGGCCCGG CTATGCGAACGCGATGCCCACCCTGGGCCCGATCAAGACGTCACCGATCACCGTCGACGGCACCAAGGCGGTCCGGGCCG ACGCCGACGTCACCATCGCCGACCCCACCCGCAACGTCAAGGGCGATTCGGTCACCATCATCGCGGTCGACACCAAACCC GTCAGCGTGTTCATCGGCAGCACACCGATCGGTGACAGCGCCTCGGCCGGACTGATCGGCAAGATCATCGCCGCGCTGAA GGTCGCGAAGTCCTAA
Upstream 100 bases:
>100_bases CGGGCTGATCGGCGACAAGCTGTCGCTCGAGGAGCTCGACCGCCGGCTCGACGTGCTGGCCATGGCCAAGGTCAAGCCGC AGGACTGAGCCGACCGTTCG
Downstream 100 bases:
>100_bases CCGGTGGGCGCCGAGACGTGGGTGGTCTCGGATCGCCCGCGCAGCACGGTGGAATAGCATTCGGCCCAGTGTCCGCGTTC GGCTTCGCCGGCCGCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTAVDDSKDGFSMTAPPGGIYGPGSYGSNPYGQEPNWGGQPPGGQPPGGQPQGGPYPQPGQYPAGGPYPYPPPGGGYPYP GGPYPGGPYPGAPYPGPGQPFGPGGPYSPGPPPGGPGSKLPWLIVAGLVVLAVIALVATLVVMKGGHGSKPSGATPSSTS TSVSQPKNSAQNATDCTPNVSGGDMPRSDSIAAGKLSFPANAAPSGWTVFSDDQGPNLIGALGVAQDVPGANQWMMTAEV GVTNFVPSMDLTAQATKLMQCLANGPGYANAMPTLGPIKTSPITVDGTKAVRADADVTIADPTRNVKGDSVTIIAVDTKP VSVFIGSTPIGDSASAGLIGKIIAALKVAKS
Sequences:
>Translated_351_residues MTAVDDSKDGFSMTAPPGGIYGPGSYGSNPYGQEPNWGGQPPGGQPPGGQPQGGPYPQPGQYPAGGPYPYPPPGGGYPYP GGPYPGGPYPGAPYPGPGQPFGPGGPYSPGPPPGGPGSKLPWLIVAGLVVLAVIALVATLVVMKGGHGSKPSGATPSSTS TSVSQPKNSAQNATDCTPNVSGGDMPRSDSIAAGKLSFPANAAPSGWTVFSDDQGPNLIGALGVAQDVPGANQWMMTAEV GVTNFVPSMDLTAQATKLMQCLANGPGYANAMPTLGPIKTSPITVDGTKAVRADADVTIADPTRNVKGDSVTIIAVDTKP VSVFIGSTPIGDSASAGLIGKIIAALKVAKS >Mature_350_residues TAVDDSKDGFSMTAPPGGIYGPGSYGSNPYGQEPNWGGQPPGGQPPGGQPQGGPYPQPGQYPAGGPYPYPPPGGGYPYPG GPYPGGPYPGAPYPGPGQPFGPGGPYSPGPPPGGPGSKLPWLIVAGLVVLAVIALVATLVVMKGGHGSKPSGATPSSTST SVSQPKNSAQNATDCTPNVSGGDMPRSDSIAAGKLSFPANAAPSGWTVFSDDQGPNLIGALGVAQDVPGANQWMMTAEVG VTNFVPSMDLTAQATKLMQCLANGPGYANAMPTLGPIKTSPITVDGTKAVRADADVTIADPTRNVKGDSVTIIAVDTKPV SVFIGSTPIGDSASAGLIGKIIAALKVAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34800; Mature: 34669
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVDDSKDGFSMTAPPGGIYGPGSYGSNPYGQEPNWGGQPPGGQPPGGQPQGGPYPQPG CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QYPAGGPYPYPPPGGGYPYPGGPYPGGPYPGAPYPGPGQPFGPGGPYSPGPPPGGPGSKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PWLIVAGLVVLAVIALVATLVVMKGGHGSKPSGATPSSTSTSVSQPKNSAQNATDCTPNV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC SGGDMPRSDSIAAGKLSFPANAAPSGWTVFSDDQGPNLIGALGVAQDVPGANQWMMTAEV CCCCCCCCCCCCCCEECCCCCCCCCCCEEEECCCCCCEEECCCHHHCCCCCCCEEEEECC GVTNFVPSMDLTAQATKLMQCLANGPGYANAMPTLGPIKTSPITVDGTKAVRADADVTIA CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCEEEE DPTRNVKGDSVTIIAVDTKPVSVFIGSTPIGDSASAGLIGKIIAALKVAKS CCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TAVDDSKDGFSMTAPPGGIYGPGSYGSNPYGQEPNWGGQPPGGQPPGGQPQGGPYPQPG CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QYPAGGPYPYPPPGGGYPYPGGPYPGGPYPGAPYPGPGQPFGPGGPYSPGPPPGGPGSKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PWLIVAGLVVLAVIALVATLVVMKGGHGSKPSGATPSSTSTSVSQPKNSAQNATDCTPNV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC SGGDMPRSDSIAAGKLSFPANAAPSGWTVFSDDQGPNLIGALGVAQDVPGANQWMMTAEV CCCCCCCCCCCCCCEECCCCCCCCCCCEEEECCCCCCEEECCCHHHCCCCCCCEEEEECC GVTNFVPSMDLTAQATKLMQCLANGPGYANAMPTLGPIKTSPITVDGTKAVRADADVTIA CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCEEEE DPTRNVKGDSVTIIAVDTKPVSVFIGSTPIGDSASAGLIGKIIAALKVAKS CCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA