| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408776
Identifier: 41408776
GI number: 41408776
Start: 3014253
End: 3014528
Strand: Reverse
Name: 41408776
Synonym: MAP2678c
Alternate gene names: NA
Gene position: 3014528-3014253 (Counterclockwise)
Preceding gene: 41408777
Following gene: 41408775
Centisome position: 62.42
GC content: 73.55
Gene sequence:
>276_bases ATGGCTCCGTTCATCGCCGCCGCCGTGGAGATCTCCGATCCGCAGCATCCCGCGCGCGTGCGGGCCCGCGAGTACAAGAC CTCCGTCGCCGCCCGCCTGAGCGAGACCGCCCGGGAGGCCGGCGCCGCCGATCCAGAACTCCTCGCTGAGCAGCTGGCGC TGTTGCTCGATGGCGCCTCGGTTCGGACCAGGGCCTTGGGCACCGACGCCTTCCGGACGGCTGCCGGGATCGCGGCCGCC CTGGTCGAGCGCGCCATACCCCCGACGGCACGGTGA
Upstream 100 bases:
>100_bases ACGTCGCGCCCGATCCCCGTCGTCGTCCTGACGCCGAAAAGCTAGCGCACAGCAACATTCGGTACCCGATGCGCCCGGCG AAGCGGAGGCTTCACGTCAG
Downstream 100 bases:
>100_bases ATCTCGCGCCTGCCGGCCCGACAAAACGGCCGCTCGGTTGTCAGAGGCAGCGCCTAATGTGCTTGGGCGACACCACATCC ACCCCTTCGAGGAGCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MAPFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGASVRTRALGTDAFRTAAGIAAA LVERAIPPTAR
Sequences:
>Translated_91_residues MAPFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGASVRTRALGTDAFRTAAGIAAA LVERAIPPTAR >Mature_90_residues APFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGASVRTRALGTDAFRTAAGIAAAL VERAIPPTAR
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9493; Mature: 9362
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGAS CCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC VRTRALGTDAFRTAAGIAAALVERAIPPTAR HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure APFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGAS CCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC VRTRALGTDAFRTAAGIAAALVERAIPPTAR HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA