| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408766
Identifier: 41408766
GI number: 41408766
Start: 3005633
End: 3006106
Strand: Reverse
Name: 41408766
Synonym: MAP2668c
Alternate gene names: NA
Gene position: 3006106-3005633 (Counterclockwise)
Preceding gene: 41408768
Following gene: 41408765
Centisome position: 62.24
GC content: 66.67
Gene sequence:
>474_bases ATGCCATCGATCACCCCGTCCTTGTGGTTCGACGACAACCTGGAGGAGGCGGCCACGTTCTACACCTCGGTGTTCCCGAA CTCGCACATCGAGGGGTTCAACCGGACCACCGAGGCCGGCCCGGGCGAGCCCGGGACGGTGCTGTCGGGCAGCTTCGTGC TGGACGGCTCGCGGTTCATCGGGATCAACGGCGGCCCGCACTTCCGGTTCAGCGAGGCGGTGTCGTTCACGGTGCACTGC AAGGACCAGGACGAGGTCGACTACTACTGGGACCGGTTGAGCGACGGCGGCGAGGAATCCCAATGCGGCTGGCTCAAAGA CCGCTTCGGCCTGAGCTGGCAAATCGTCCCCGACCGGCTCTTCGAACTGATCGGCGACCCCGATCGCAGCAGGGCGGCGG CGGCCACCCAGGCGATGTACGGCATGCGCAAGATCGTCATCGCCGAGCTGGAGCGGGCCGCGGCATCCTCATAG
Upstream 100 bases:
>100_bases GGCATAAGCACTCTTGCGCGGGCCGACGACGCGATGAGTTTCCACGGCCGCCGGGGTCTACCCCAGCACAACCAACCAGC CGGCGAGGAGGCCCGCGGAC
Downstream 100 bases:
>100_bases CGAAACCCGCTGACGCAGTGGCGGTTTGACTTCATACTTACTGCGGTCGGTGCGTCTCGACGACACACGGGTTAGGTTGG TCCGTGCGGACGCGCCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; PhnB Protein; Signal Peptide; 3-Demethylubiquinone-9 3-Methyltransferase Family; 3-Demethylubiquinone-93- Methyltransferase Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFIGINGGPHFRFSEAVSFTVHC KDQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRLFELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS
Sequences:
>Translated_157_residues MPSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFIGINGGPHFRFSEAVSFTVHC KDQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRLFELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS >Mature_156_residues PSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFIGINGGPHFRFSEAVSFTVHCK DQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRLFELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17393; Mature: 17262
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFI CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECEEEECCCEEE GINGGPHFRFSEAVSFTVHCKDQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRL EECCCCCEEECCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCEEEECHHHH FELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFI CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECEEEECCCEEE GINGGPHFRFSEAVSFTVHCKDQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRL EECCCCCEEECCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCEEEECHHHH FELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA