Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408766

Identifier: 41408766

GI number: 41408766

Start: 3005633

End: 3006106

Strand: Reverse

Name: 41408766

Synonym: MAP2668c

Alternate gene names: NA

Gene position: 3006106-3005633 (Counterclockwise)

Preceding gene: 41408768

Following gene: 41408765

Centisome position: 62.24

GC content: 66.67

Gene sequence:

>474_bases
ATGCCATCGATCACCCCGTCCTTGTGGTTCGACGACAACCTGGAGGAGGCGGCCACGTTCTACACCTCGGTGTTCCCGAA
CTCGCACATCGAGGGGTTCAACCGGACCACCGAGGCCGGCCCGGGCGAGCCCGGGACGGTGCTGTCGGGCAGCTTCGTGC
TGGACGGCTCGCGGTTCATCGGGATCAACGGCGGCCCGCACTTCCGGTTCAGCGAGGCGGTGTCGTTCACGGTGCACTGC
AAGGACCAGGACGAGGTCGACTACTACTGGGACCGGTTGAGCGACGGCGGCGAGGAATCCCAATGCGGCTGGCTCAAAGA
CCGCTTCGGCCTGAGCTGGCAAATCGTCCCCGACCGGCTCTTCGAACTGATCGGCGACCCCGATCGCAGCAGGGCGGCGG
CGGCCACCCAGGCGATGTACGGCATGCGCAAGATCGTCATCGCCGAGCTGGAGCGGGCCGCGGCATCCTCATAG

Upstream 100 bases:

>100_bases
GGCATAAGCACTCTTGCGCGGGCCGACGACGCGATGAGTTTCCACGGCCGCCGGGGTCTACCCCAGCACAACCAACCAGC
CGGCGAGGAGGCCCGCGGAC

Downstream 100 bases:

>100_bases
CGAAACCCGCTGACGCAGTGGCGGTTTGACTTCATACTTACTGCGGTCGGTGCGTCTCGACGACACACGGGTTAGGTTGG
TCCGTGCGGACGCGCCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; PhnB Protein; Signal Peptide; 3-Demethylubiquinone-9 3-Methyltransferase Family; 3-Demethylubiquinone-93- Methyltransferase Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFIGINGGPHFRFSEAVSFTVHC
KDQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRLFELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS

Sequences:

>Translated_157_residues
MPSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFIGINGGPHFRFSEAVSFTVHC
KDQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRLFELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS
>Mature_156_residues
PSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFIGINGGPHFRFSEAVSFTVHCK
DQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRLFELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS

Specific function: Unknown

COG id: COG3865

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17393; Mature: 17262

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFI
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECEEEECCCEEE
GINGGPHFRFSEAVSFTVHCKDQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRL
EECCCCCEEECCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCEEEECHHHH
FELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSITPSLWFDDNLEEAATFYTSVFPNSHIEGFNRTTEAGPGEPGTVLSGSFVLDGSRFI
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECEEEECCCEEE
GINGGPHFRFSEAVSFTVHCKDQDEVDYYWDRLSDGGEESQCGWLKDRFGLSWQIVPDRL
EECCCCCEEECCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCEEEECHHHH
FELIGDPDRSRAAAATQAMYGMRKIVIAELERAAASS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA