| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is smtA [C]
Identifier: 41408732
GI number: 41408732
Start: 2967218
End: 2967865
Strand: Reverse
Name: smtA [C]
Synonym: MAP2634c
Alternate gene names: 41408732
Gene position: 2967865-2967218 (Counterclockwise)
Preceding gene: 41408733
Following gene: 41408730
Centisome position: 61.45
GC content: 71.6
Gene sequence:
>648_bases GTGCACACAGGCATGACAACGGTGGTCGTCGACAACCCGTTCTTCGCGCGCATCTGGCCGGTCGTCGCCACGCACGAGAC GGCGGCGGTGCGGGCCCTTCGCCGGGAGAACGTGGCCGGCCTGACCGGCCGGGTGCTGGAGGTCGGCGCGGGCATCGGGA CCAACTTTCCGCTCTACCCGGAGACGGTCGACGAGGTGATCGCGGTGGAGCCCGAGCCGAGGCTGGCCGACCGGGCCCGC GCCGCGGCGCAGGTGGTGCCGGTTCGGGTCGTGGTGACCGGCGAGACGGCCGAAGCGGTCGGCGGCGACGAGCCGTTCGA CGCGGTGGTGTGCTCGCTGGTGTTGTGTTCGGTGCGCGACCCTCAGGGCGTGTTGCGGCGCCTGTATTCGTTGCTGCGCC CGGGCGGGCAGCTGCGCTACCTCGAGCACATCGCCAGTGCCTGCGCGCGGGGTCGCTTTCAGCGTTTCGTCGATGCGACG TTGTGGCCGCGACTGTTCGGTAACTGCCACACCCATCGCGACACCGAACGCTCGATCGTCGAGGCGGGGTTCGACGTCGA CGCGTCGCGGCGGGAGTGGACGTTGCCGGCCTGGTCGCCGATGCCGGTGTCGGAGCTGTTGCTGGGCCGCGCGCACCGGC CCGCCTAG
Upstream 100 bases:
>100_bases GTCGCCGAACCGGTGCCCAACATCGGTTGACGGCCGTTCGGCCAACCGCCCGTCGAGTGTGGCGGTCGGACCCTATTCTG AGGCTCATTCGAGGCGGAAG
Downstream 100 bases:
>100_bases TCCGCGCTCAGTTGAGCAGCGCCGGCAACCGCTGCAGCAGCCCGGGCAAGGCCTGGCTGGCCGTCTCCCGGATGCTGAGC GTGGCGCTGGCCGACAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Methyltransferase Domain Family; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methyltransferase UbiE/COQ5 Family; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Generic Methyltransferase; SAM-Dependent Methyltransferase; Phosphatidylethanolamine N-Methyltransferase; Methyltransferase Domain Family Protein; UbiE/COQ5 Family Methlytransferase; UbiE/COQ5 Methyltransferase; Sam Dependent Methyltransferase
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MHTGMTTVVVDNPFFARIWPVVATHETAAVRALRRENVAGLTGRVLEVGAGIGTNFPLYPETVDEVIAVEPEPRLADRAR AAAQVVPVRVVVTGETAEAVGGDEPFDAVVCSLVLCSVRDPQGVLRRLYSLLRPGGQLRYLEHIASACARGRFQRFVDAT LWPRLFGNCHTHRDTERSIVEAGFDVDASRREWTLPAWSPMPVSELLLGRAHRPA
Sequences:
>Translated_215_residues MHTGMTTVVVDNPFFARIWPVVATHETAAVRALRRENVAGLTGRVLEVGAGIGTNFPLYPETVDEVIAVEPEPRLADRAR AAAQVVPVRVVVTGETAEAVGGDEPFDAVVCSLVLCSVRDPQGVLRRLYSLLRPGGQLRYLEHIASACARGRFQRFVDAT LWPRLFGNCHTHRDTERSIVEAGFDVDASRREWTLPAWSPMPVSELLLGRAHRPA >Mature_215_residues MHTGMTTVVVDNPFFARIWPVVATHETAAVRALRRENVAGLTGRVLEVGAGIGTNFPLYPETVDEVIAVEPEPRLADRAR AAAQVVPVRVVVTGETAEAVGGDEPFDAVVCSLVLCSVRDPQGVLRRLYSLLRPGGQLRYLEHIASACARGRFQRFVDAT LWPRLFGNCHTHRDTERSIVEAGFDVDASRREWTLPAWSPMPVSELLLGRAHRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI89145417, Length=185, Percent_Identity=31.3513513513514, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI164663805, Length=213, Percent_Identity=29.5774647887324, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23614; Mature: 23614
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTGMTTVVVDNPFFARIWPVVATHETAAVRALRRENVAGLTGRVLEVGAGIGTNFPLYP CCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH ETVDEVIAVEPEPRLADRARAAAQVVPVRVVVTGETAEAVGGDEPFDAVVCSLVLCSVRD HHHHHEEECCCCCCHHHHHHHHHHEEEEEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCC PQGVLRRLYSLLRPGGQLRYLEHIASACARGRFQRFVDATLWPRLFGNCHTHRDTERSIV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EAGFDVDASRREWTLPAWSPMPVSELLLGRAHRPA HHCCCCCCCCCEECCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MHTGMTTVVVDNPFFARIWPVVATHETAAVRALRRENVAGLTGRVLEVGAGIGTNFPLYP CCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH ETVDEVIAVEPEPRLADRARAAAQVVPVRVVVTGETAEAVGGDEPFDAVVCSLVLCSVRD HHHHHEEECCCCCCHHHHHHHHHHEEEEEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCC PQGVLRRLYSLLRPGGQLRYLEHIASACARGRFQRFVDATLWPRLFGNCHTHRDTERSIV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EAGFDVDASRREWTLPAWSPMPVSELLLGRAHRPA HHCCCCCCCCCEECCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA