| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408679
Identifier: 41408679
GI number: 41408679
Start: 2903476
End: 2904384
Strand: Reverse
Name: 41408679
Synonym: MAP2581c
Alternate gene names: NA
Gene position: 2904384-2903476 (Counterclockwise)
Preceding gene: 41408680
Following gene: 41408678
Centisome position: 60.13
GC content: 70.85
Gene sequence:
>909_bases ATGGCCATCGAGATCGCCCGCCCCAAACTCGAGGGAAACGTCGCCGTCGGTGAGGACCGCCAGATCGGGTTCGCCGAGTT CGGCGACCCGCAGGGGCGCGCGATGTTCTGGTTGCACGGCACCCCCGGCGCCCGCCGGCAGATCCCGGTCGAGGCCCGCC TGTACGCCGAGAACCATAAGATCCGGCTGATCGGGCTGGACCGCCCGGGCATCGGGTCGTCGACGCCGCATCGCTACCAG AACATCCGGGCGTTCGGCGAGGACCTGCGGACCATCGCGGACACGCTGGGCATCCACAAGATGGCCGTCATCGGGCTGTC CGGCGGCGGCCCCTACGCGCTGGCGTCCGCCGCGGTGCTGCCCGACCGGGTCGTGGCGGCCGGCATCCTCGGCGGCGTCG CGCCCTTCCTCGGCGACGAGGGCATCACCAGCGGCCTGATGAACCTGGGCAAGCGGGTGGCTCCGCTGCTGAAGCTGGGC GGCGACCCGCTGCGGATCGGCGCCAGCCTGGTCGTGCGGGCCATCCGCCCGGTCGCCAACCCCGCCCTGTACCTGTACGC GGCGATCTCGCCCGAGGGCGACCGGCGGCTGCTCACCCGGCCCGAGTTCGGGGCCATGTTCCTCGACGACCTGCTCAACG GCAGCCGCAAGCAACTGGCCGCCCCGTTCAACGACATCATCCTGTTCACCCAGGACTGGGGATTCCGGCTCGACCAGGTC AAGGTCCCGGTCCGGTGGTGGCACGGCGACAGCGACCACATCGTGCCGTTCGCGCACGGACAACACGTCGTGTCCTTGCT GCCCGACGCCGAGCTGTTCGTGCTGCCCGGCGAGAGCCACCTCGGCGGGCTGGGCCGCGGCGAGGAGATCCTGTCCACCC TGACCAAGATCTGGGACGAGCAGAACTGA
Upstream 100 bases:
>100_bases TCAGCAGCGGGTCATCGGCGAGCGGGTGCTCAACGCATAGCTGCCGGCAACGCATGCCGGGCCCTTTGTAAACCGCGCGT GACATGCCAAGCTGCTCGAC
Downstream 100 bases:
>100_bases CCCGTGCCGGTGGCGGGTAGCCTGCTGGCGTGCTGCTGACGTCGCTGAATCCCTCGGCCGTTACCGCCACCGACATCCCC GACGCGGTACGCATCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Fold Superfamily Hydrolase; Peptidase; RNA Polymerase Sigma Factor SigI; Hydrolase Alpha/Beta Hydrolase Fold Domain Protein; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAIEIARPKLEGNVAVGEDRQIGFAEFGDPQGRAMFWLHGTPGARRQIPVEARLYAENHKIRLIGLDRPGIGSSTPHRYQ NIRAFGEDLRTIADTLGIHKMAVIGLSGGGPYALASAAVLPDRVVAAGILGGVAPFLGDEGITSGLMNLGKRVAPLLKLG GDPLRIGASLVVRAIRPVANPALYLYAAISPEGDRRLLTRPEFGAMFLDDLLNGSRKQLAAPFNDIILFTQDWGFRLDQV KVPVRWWHGDSDHIVPFAHGQHVVSLLPDAELFVLPGESHLGGLGRGEEILSTLTKIWDEQN
Sequences:
>Translated_302_residues MAIEIARPKLEGNVAVGEDRQIGFAEFGDPQGRAMFWLHGTPGARRQIPVEARLYAENHKIRLIGLDRPGIGSSTPHRYQ NIRAFGEDLRTIADTLGIHKMAVIGLSGGGPYALASAAVLPDRVVAAGILGGVAPFLGDEGITSGLMNLGKRVAPLLKLG GDPLRIGASLVVRAIRPVANPALYLYAAISPEGDRRLLTRPEFGAMFLDDLLNGSRKQLAAPFNDIILFTQDWGFRLDQV KVPVRWWHGDSDHIVPFAHGQHVVSLLPDAELFVLPGESHLGGLGRGEEILSTLTKIWDEQN >Mature_301_residues AIEIARPKLEGNVAVGEDRQIGFAEFGDPQGRAMFWLHGTPGARRQIPVEARLYAENHKIRLIGLDRPGIGSSTPHRYQN IRAFGEDLRTIADTLGIHKMAVIGLSGGGPYALASAAVLPDRVVAAGILGGVAPFLGDEGITSGLMNLGKRVAPLLKLGG DPLRIGASLVVRAIRPVANPALYLYAAISPEGDRRLLTRPEFGAMFLDDLLNGSRKQLAAPFNDIILFTQDWGFRLDQVK VPVRWWHGDSDHIVPFAHGQHVVSLLPDAELFVLPGESHLGGLGRGEEILSTLTKIWDEQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32701; Mature: 32570
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEIARPKLEGNVAVGEDRQIGFAEFGDPQGRAMFWLHGTPGARRQIPVEARLYAENHK CEEEECCCCCCCCEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCE IRLIGLDRPGIGSSTPHRYQNIRAFGEDLRTIADTLGIHKMAVIGLSGGGPYALASAAVL EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHC PDRVVAAGILGGVAPFLGDEGITSGLMNLGKRVAPLLKLGGDPLRIGASLVVRAIRPVAN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC PALYLYAAISPEGDRRLLTRPEFGAMFLDDLLNGSRKQLAAPFNDIILFTQDWGFRLDQV CEEEEEEEECCCCCCEEECCCCCHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCEEEEE KVPVRWWHGDSDHIVPFAHGQHVVSLLPDAELFVLPGESHLGGLGRGEEILSTLTKIWDE EEEEEEEECCCCCEEEECCCCCCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCC QN CC >Mature Secondary Structure AIEIARPKLEGNVAVGEDRQIGFAEFGDPQGRAMFWLHGTPGARRQIPVEARLYAENHK EEEECCCCCCCCEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCE IRLIGLDRPGIGSSTPHRYQNIRAFGEDLRTIADTLGIHKMAVIGLSGGGPYALASAAVL EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHC PDRVVAAGILGGVAPFLGDEGITSGLMNLGKRVAPLLKLGGDPLRIGASLVVRAIRPVAN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC PALYLYAAISPEGDRRLLTRPEFGAMFLDDLLNGSRKQLAAPFNDIILFTQDWGFRLDQV CEEEEEEEECCCCCCEEECCCCCHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCEEEEE KVPVRWWHGDSDHIVPFAHGQHVVSLLPDAELFVLPGESHLGGLGRGEEILSTLTKIWDE EEEEEEEECCCCCEEEECCCCCCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCC QN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA