| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is tatB [H]
Identifier: 41408652
GI number: 41408652
Start: 2872375
End: 2872770
Strand: Reverse
Name: tatB [H]
Synonym: MAP2554c
Alternate gene names: 41408652
Gene position: 2872770-2872375 (Counterclockwise)
Preceding gene: 41408653
Following gene: 41408647
Centisome position: 59.48
GC content: 73.48
Gene sequence:
>396_bases ATGCTCGGCAGTCTGAGCTGGGAGCACATGCTGGTCCTCGTGGTGGTGGGCCTGGTGGTGCTCGGGCCGGAGCGGCTGCC GGGCGCCATCCGGTGGACGTCGAACGCCCTGCGCCAGGCGCGGGACTACCTCAGCGGTGTGACCACCCAGTTGCGCGAGG ACCTCGGGCCCGAGTTCGACGATCTGCGCGTCCCGCTCAGCGAGCTGCAGAAGCTGCGGGGGATGACGCCGCGGGCCGCG CTGACCAAGCACCTGTTGGACGGCGACGATTCGTTCTTGACCGGGGCCTTCGACCGGCCGGTCAACGGCGCCGCGGCCCA GCCGCCGCCCGCCCCGGCGCCACCGCCCGAGCCGCACCGCTCCGGCCAGACGCCGTTCGACGCCGACGCCACCTGA
Upstream 100 bases:
>100_bases CGGTGCGGCAGCTGACCATCGGCCAGGATTCCCCGATCGAGGTGGTGCGCGACGGCCGCCACGTCACCCTGACGGTGAAG CCGGACCCGGACGGCAGCTG
Downstream 100 bases:
>100_bases ACCGTCAGCGCCGGGTGGGGTCGAGCCCCAGCGACACCCCGGCCAGTCCGCGCCGGCGCGACGACAGGCTGTCGGCCACC GCGCGCAGCGCCTTGCCCAC
Product: sec-independent translocase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLGSLSWEHMLVLVVVGLVVLGPERLPGAIRWTSNALRQARDYLSGVTTQLREDLGPEFDDLRVPLSELQKLRGMTPRAA LTKHLLDGDDSFLTGAFDRPVNGAAAQPPPAPAPPPEPHRSGQTPFDADAT
Sequences:
>Translated_131_residues MLGSLSWEHMLVLVVVGLVVLGPERLPGAIRWTSNALRQARDYLSGVTTQLREDLGPEFDDLRVPLSELQKLRGMTPRAA LTKHLLDGDDSFLTGAFDRPVNGAAAQPPPAPAPPPEPHRSGQTPFDADAT >Mature_131_residues MLGSLSWEHMLVLVVVGLVVLGPERLPGAIRWTSNALRQARDYLSGVTTQLREDLGPEFDDLRVPLSELQKLRGMTPRAA LTKHLLDGDDSFLTGAFDRPVNGAAAQPPPAPAPPPEPHRSGQTPFDADAT
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 14142; Mature: 14142
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGSLSWEHMLVLVVVGLVVLGPERLPGAIRWTSNALRQARDYLSGVTTQLREDLGPEFD CCCCCCHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DLRVPLSELQKLRGMTPRAALTKHLLDGDDSFLTGAFDRPVNGAAAQPPPAPAPPPEPHR HHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGQTPFDADAT CCCCCCCCCCC >Mature Secondary Structure MLGSLSWEHMLVLVVVGLVVLGPERLPGAIRWTSNALRQARDYLSGVTTQLREDLGPEFD CCCCCCHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DLRVPLSELQKLRGMTPRAALTKHLLDGDDSFLTGAFDRPVNGAAAQPPPAPAPPPEPHR HHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGQTPFDADAT CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA