| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408647
Identifier: 41408647
GI number: 41408647
Start: 2866507
End: 2867031
Strand: Reverse
Name: 41408647
Synonym: MAP2549c
Alternate gene names: NA
Gene position: 2867031-2866507 (Counterclockwise)
Preceding gene: 41408652
Following gene: 41408646
Centisome position: 59.36
GC content: 69.14
Gene sequence:
>525_bases ATGACTAGTCCTTTCCAGCCCGGGCAGGTTCCCGGCGCGCCACCCCCCGGCGCGGGCGGTCGCCGCGGCGTGCCCGGTCT GCCGACACCGCCCCGGGGCTGGCCCGTCGGCTCCTATCCCACCTACGCCGAGGCGCAGCGTGCCGTCGACTACCTGTCCG ACCAGCAGTTCCCGGTCCAGCAGGTCACCATCGTCGGGGTCGACCTGATGCAGGTGGAACGGGTGACCGGCCGGCTGACC TGGCCCAAGGTGCTCGGCGGTGGCGTGCTGAGCGGGGCATGGCTGGGTTTGTTCATCGGGCTGGTGCTCGGATTCTTCAG CCCCAACCCGTGGGGGGCGCTGGCCACCGGTCTGGTCGCCGGTGTGTTCTTCGGGTTGATCACCTCCGCCGTTCCTTACT CGATGGCCCGTGGCACAAGGGATTTCAGCTCGACCATGCAGCTGGTGGCGGGCCGCTACGACGTGCTCTGCGATCCGCAG AATGCGGAGAAGGCGCGGGACCTGTTGGCGCGCTTGGCGATTTGA
Upstream 100 bases:
>100_bases TGTTTCCGCAGGTGGCATCCGTTGGCCGGCTGGACCGGCTGGATAGGCTGGGGAGGACCTGAGATGAAACGACGGTCGAG GCGGAGGAGAATGAGCGGCG
Downstream 100 bases:
>100_bases GGCGCGCACGAGAGGTGTGAACAAGTGGTGATCGGTCGTGGGCGCGTACGCCGGGCAGGCGCGGTCGCGCTGGCGACACT CACCATCGCCGCGGCGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTSPFQPGQVPGAPPPGAGGRRGVPGLPTPPRGWPVGSYPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLT WPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWGALATGLVAGVFFGLITSAVPYSMARGTRDFSSTMQLVAGRYDVLCDPQ NAEKARDLLARLAI
Sequences:
>Translated_174_residues MTSPFQPGQVPGAPPPGAGGRRGVPGLPTPPRGWPVGSYPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLT WPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWGALATGLVAGVFFGLITSAVPYSMARGTRDFSSTMQLVAGRYDVLCDPQ NAEKARDLLARLAI >Mature_173_residues TSPFQPGQVPGAPPPGAGGRRGVPGLPTPPRGWPVGSYPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLTW PKVLGGGVLSGAWLGLFIGLVLGFFSPNPWGALATGLVAGVFFGLITSAVPYSMARGTRDFSSTMQLVAGRYDVLCDPQN AEKARDLLARLAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18384; Mature: 18253
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPFQPGQVPGAPPPGAGGRRGVPGLPTPPRGWPVGSYPTYAEAQRAVDYLSDQQFPVQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHH QVTIVGVDLMQVERVTGRLTWPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWGALATGLVA HHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GVFFGLITSAVPYSMARGTRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure TSPFQPGQVPGAPPPGAGGRRGVPGLPTPPRGWPVGSYPTYAEAQRAVDYLSDQQFPVQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHH QVTIVGVDLMQVERVTGRLTWPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWGALATGLVA HHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GVFFGLITSAVPYSMARGTRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA