| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yagE [C]
Identifier: 41408490
GI number: 41408490
Start: 2688056
End: 2689072
Strand: Reverse
Name: yagE [C]
Synonym: MAP2392c
Alternate gene names: 41408490
Gene position: 2689072-2688056 (Counterclockwise)
Preceding gene: 41408491
Following gene: 41408488
Centisome position: 55.68
GC content: 68.63
Gene sequence:
>1017_bases GTGGCTACGGCAGCAGACGCGCGCGCCTGGGCGCGCGGCGCATTGCGGGGGATCGGTGACTCCCTCTACACCCCGTTCTG CGGACCGGACGGCGACGACATCGACTGGGACGCCTACCGGGAACTGGTGCGCTACTGCGTCGGCGATCTCGGCCACCCGA TGTTGTGGTGCACCAGCGGCATCGCCGAGTTCTGGGCCCTGACCCTCGATGAGCGAAAACGCCTGCTGGAAGTGGCAATC GAGGAAGGACGCGCCGCGAATCCCGACGTGGTGATCCAGGCCTGCACGGCGGCCATGTCGGCGAAGGACTGCGTGGAGTT GACGCTGCACGCCCAGCAGGTGGGCGCCGACATCGCCTACATCCAGACGCCGATGATGGAGGCCCACGGCGGCGAGGGCG TGTTGCGATTCTTCGAGTATGTGGCGGCGCGCACCGACATCGCCCTGGGCATGTTCAACTCGCCGTCGTCGGGCTACGTG CTGACGCCGGCCGAAAGCGCCCGGATCTATCACGAGGTTCCCGCGGTGTGCGCCACCAAGGAAGGCGCCTTCCGGCCGGG GGCCAGCCGGCTGCTGCACGAGCTGGCACCCGGCCTGGTGCTCTGGGAGTGCGACAAGACGGTGTACCGCGCCGGGTGGC TGCGCGACGGGATCGTGTGCCCGGCGCAGCTGGGTACCGCCGGCTACCTGTTCGAGACCCCGCAGCGCCGATTGTTCTCC GAATATTGGGATTTGGTGCAGAGCGGCAAGCTCATCGAGGCGATGGACTACGGCCGGGAATCCGGGTTGGACCAGTTCGA CCTGGACGTCGGTTCGTGGTGGACCTGCCACCCGGGCAGGGCCGATTACTTCACCCACTGGGGCGGGGCGTTCAAGTACG CCGCCTCGCTGCTTGGGCTGCCGATCGGCGCCTACCCGCACTCCCGTCCCCCGCAGGCCGAGCTGCCCGCCGAGGCCAAG GCCCAGATCGAGAACGCCTACCAGCGGCTGGGCCTCCTGGCAACGGCGTTGCGGTAG
Upstream 100 bases:
>100_bases ACTCCTACATGACGGGCGCCAACATCAACGTCGACGGCGGTTCGGACTTCACCTGAACCGGCGGTGAAAGAAAACGATTG GCAGACAAAAGGAGTCGACT
Downstream 100 bases:
>100_bases AAGGGGTTACACGGAAACGGGCCCGGTCATCGACCGGGCCCGCCTCGCGTCACTCACTGTTGCTGTTCGGCCCGTTCGCG CTGCTCGTAGGCCTTGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: 2 4-Dihydroxyhept-2-Ene-1 7-Dioic Acid Aldolase; Dihydrodipicolinate Synthase; Dihydrodipicolinate Synthase Family Protein
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MATAADARAWARGALRGIGDSLYTPFCGPDGDDIDWDAYRELVRYCVGDLGHPMLWCTSGIAEFWALTLDERKRLLEVAI EEGRAANPDVVIQACTAAMSAKDCVELTLHAQQVGADIAYIQTPMMEAHGGEGVLRFFEYVAARTDIALGMFNSPSSGYV LTPAESARIYHEVPAVCATKEGAFRPGASRLLHELAPGLVLWECDKTVYRAGWLRDGIVCPAQLGTAGYLFETPQRRLFS EYWDLVQSGKLIEAMDYGRESGLDQFDLDVGSWWTCHPGRADYFTHWGGAFKYAASLLGLPIGAYPHSRPPQAELPAEAK AQIENAYQRLGLLATALR
Sequences:
>Translated_338_residues MATAADARAWARGALRGIGDSLYTPFCGPDGDDIDWDAYRELVRYCVGDLGHPMLWCTSGIAEFWALTLDERKRLLEVAI EEGRAANPDVVIQACTAAMSAKDCVELTLHAQQVGADIAYIQTPMMEAHGGEGVLRFFEYVAARTDIALGMFNSPSSGYV LTPAESARIYHEVPAVCATKEGAFRPGASRLLHELAPGLVLWECDKTVYRAGWLRDGIVCPAQLGTAGYLFETPQRRLFS EYWDLVQSGKLIEAMDYGRESGLDQFDLDVGSWWTCHPGRADYFTHWGGAFKYAASLLGLPIGAYPHSRPPQAELPAEAK AQIENAYQRLGLLATALR >Mature_337_residues ATAADARAWARGALRGIGDSLYTPFCGPDGDDIDWDAYRELVRYCVGDLGHPMLWCTSGIAEFWALTLDERKRLLEVAIE EGRAANPDVVIQACTAAMSAKDCVELTLHAQQVGADIAYIQTPMMEAHGGEGVLRFFEYVAARTDIALGMFNSPSSGYVL TPAESARIYHEVPAVCATKEGAFRPGASRLLHELAPGLVLWECDKTVYRAGWLRDGIVCPAQLGTAGYLFETPQRRLFSE YWDLVQSGKLIEAMDYGRESGLDQFDLDVGSWWTCHPGRADYFTHWGGAFKYAASLLGLPIGAYPHSRPPQAELPAEAKA QIENAYQRLGLLATALR
Specific function: Unknown
COG id: COG0329
COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37101; Mature: 36970
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAADARAWARGALRGIGDSLYTPFCGPDGDDIDWDAYRELVRYCVGDLGHPMLWCTSG CCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH IAEFWALTLDERKRLLEVAIEEGRAANPDVVIQACTAAMSAKDCVELTLHAQQVGADIAY HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IQTPMMEAHGGEGVLRFFEYVAARTDIALGMFNSPSSGYVLTPAESARIYHEVPAVCATK HHCCHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCHHHHHHHHHHHHHCCC EGAFRPGASRLLHELAPGLVLWECDKTVYRAGWLRDGIVCPAQLGTAGYLFETPQRRLFS CCCCCCCHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCHHHCCCCCEECCHHHHHHH EYWDLVQSGKLIEAMDYGRESGLDQFDLDVGSWWTCHPGRADYFTHWGGAFKYAASLLGL HHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCHHHHCCHHHHHHHHHHCC PIGAYPHSRPPQAELPAEAKAQIENAYQRLGLLATALR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATAADARAWARGALRGIGDSLYTPFCGPDGDDIDWDAYRELVRYCVGDLGHPMLWCTSG CCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH IAEFWALTLDERKRLLEVAIEEGRAANPDVVIQACTAAMSAKDCVELTLHAQQVGADIAY HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IQTPMMEAHGGEGVLRFFEYVAARTDIALGMFNSPSSGYVLTPAESARIYHEVPAVCATK HHCCHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCHHHHHHHHHHHHHCCC EGAFRPGASRLLHELAPGLVLWECDKTVYRAGWLRDGIVCPAQLGTAGYLFETPQRRLFS CCCCCCCHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCHHHCCCCCEECCHHHHHHH EYWDLVQSGKLIEAMDYGRESGLDQFDLDVGSWWTCHPGRADYFTHWGGAFKYAASLLGL HHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCHHHHCCHHHHHHHHHHCC PIGAYPHSRPPQAELPAEAKAQIENAYQRLGLLATALR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA