Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408487

Identifier: 41408487

GI number: 41408487

Start: 2685425

End: 2686627

Strand: Reverse

Name: 41408487

Synonym: MAP2389c

Alternate gene names: NA

Gene position: 2686627-2685425 (Counterclockwise)

Preceding gene: 41408488

Following gene: 41408486

Centisome position: 55.63

GC content: 66.33

Gene sequence:

>1203_bases
ATGACCGCCCTGAACTATCGCGTGATCGACGTCGACAACCACTATTACGAGCCGCTGGACTCGTTCACCCGCCACCTCGA
CAAGAAGTTCAAACGCCGCGGCGTCCAGATGCTCAGCGACGGCAAGCGCACCTGGGCGGTGATCGGCGACCGGGTCAACC
ACTTCATCCCCAACCCCACCTTCGACCCGATCATCGTGCCGGGCTGCCTGGACCTGTTGTTCCGCGGCGAGATCCCCGAC
GGCGTCGACCCGGCGTCGCTGATGAAGGTCGAGCGGCTGGCCGATCACCCCGAGTACCAGAACCGCGACGCCCGGATCGC
GGTGATGGACGAGCAGGACATCGAGACGGCGTTCATGTTGCCGACGTTCGGTTGCGGGGTCGAGGAGGCGCTCAAGCACG
ACATCGAGGCGACGATGGCGTCCGTGCACGCGTTCAACCTGTGGCTCGACGAGGACTGGGGCTTCGACCGGCCCGATCAC
CGGATCATCGCCGCGCCCATCGTCTCGCTGGCCGATCCGACCAGGGCGGTCGAAGAGGTCGACTTCGTGCTGGCCCGCGG
CGCCAAGCTGGTGCTGGTGCGCCCGGCGCCGGTGCCCGGCCTGGTCAAGCCGCGGTCGCTGGGTGATCGCAGCCACGACC
CGGTGTGGGCCCGGCTGGCCGAAGCCGGGGTGCCGGTGGGATTTCACCTGTCCGACAGCGGCTATCTGCACATCGCGGCG
GCCTGGGGCGGCAAGTCGACGTTCGAGGGCTTCGGCGCGAAGGACCCGCTGGATCAGGTGCTGCTCGACGACCGGGCGAT
CCACGACACGATGGCCTCGATGATCGTGCACGGCGTGTTCACCCGGCACCCCAAACTCAAGGCGGTCAGCATCGAAAACG
GTTCGTACTTCGTGCATCGGCTGATCAAGCGGCTGAAGAAGGCGGCCAACACCCAGCCCCAGTACTTCCCCGAGGACCCG
GTGGAACAGCTGCGCAACAACGTGTGGATCGCCCCGTACTACGAGGACGACCTGCCGGAGCTGGCGCGGGTCATCGGCGT
CGACAAGATCCTGTTCGGTTCCGACTGGCCGCACGGCGAAGGCCTTGCATCGCCGGTGTCGTTCACCGCGGAACTGAAGG
GATTCAGCGAGTCCGACATTCGAAAGATCATGCGGGACAACGCCCTCGATCTGCTCGGCGTGCAAGTCGGCTCGGCCGCC
TGA

Upstream 100 bases:

>100_bases
CTGCAGCGCCCCGACGTCATCGAGGGCATCACCAGCTTCCTGGAGAAGCGGCCGCCACGGTTTCCACCCCTGGCCACCTG
ACCCGCCGGAAAGGATCATC

Downstream 100 bases:

>100_bases
GTATCCGGGACCGACGACGCCCGTGAGCGAATGGACCATAGGGGCGGTTCTCGACGAAATCGCCGACGTCATCCCCGACC
GCACGATGACGGTGTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTALNYRVIDVDNHYYEPLDSFTRHLDKKFKRRGVQMLSDGKRTWAVIGDRVNHFIPNPTFDPIIVPGCLDLLFRGEIPD
GVDPASLMKVERLADHPEYQNRDARIAVMDEQDIETAFMLPTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDH
RIIAAPIVSLADPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSGYLHIAA
AWGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFTRHPKLKAVSIENGSYFVHRLIKRLKKAANTQPQYFPEDP
VEQLRNNVWIAPYYEDDLPELARVIGVDKILFGSDWPHGEGLASPVSFTAELKGFSESDIRKIMRDNALDLLGVQVGSAA

Sequences:

>Translated_400_residues
MTALNYRVIDVDNHYYEPLDSFTRHLDKKFKRRGVQMLSDGKRTWAVIGDRVNHFIPNPTFDPIIVPGCLDLLFRGEIPD
GVDPASLMKVERLADHPEYQNRDARIAVMDEQDIETAFMLPTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDH
RIIAAPIVSLADPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSGYLHIAA
AWGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFTRHPKLKAVSIENGSYFVHRLIKRLKKAANTQPQYFPEDP
VEQLRNNVWIAPYYEDDLPELARVIGVDKILFGSDWPHGEGLASPVSFTAELKGFSESDIRKIMRDNALDLLGVQVGSAA
>Mature_399_residues
TALNYRVIDVDNHYYEPLDSFTRHLDKKFKRRGVQMLSDGKRTWAVIGDRVNHFIPNPTFDPIIVPGCLDLLFRGEIPDG
VDPASLMKVERLADHPEYQNRDARIAVMDEQDIETAFMLPTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHR
IIAAPIVSLADPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSGYLHIAAA
WGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFTRHPKLKAVSIENGSYFVHRLIKRLKKAANTQPQYFPEDPV
EQLRNNVWIAPYYEDDLPELARVIGVDKILFGSDWPHGEGLASPVSFTAELKGFSESDIRKIMRDNALDLLGVQVGSAA

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44643; Mature: 44512

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALNYRVIDVDNHYYEPLDSFTRHLDKKFKRRGVQMLSDGKRTWAVIGDRVNHFIPNPT
CCCEEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCC
FDPIIVPGCLDLLFRGEIPDGVDPASLMKVERLADHPEYQNRDARIAVMDEQDIETAFML
CCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEC
PTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSLADPTRAVEEV
CCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEECHHHHHCCHHHHHHHH
DFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSGYLHIAA
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEE
AWGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFTRHPKLKAVSIENGSYFVHR
ECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
LIKRLKKAANTQPQYFPEDPVEQLRNNVWIAPYYEDDLPELARVIGVDKILFGSDWPHGE
HHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHHEEECCCCCCCC
GLASPVSFTAELKGFSESDIRKIMRDNALDLLGVQVGSAA
CCCCCHHHHHHHCCCCHHHHHHHHHCCCHHEEEEECCCCC
>Mature Secondary Structure 
TALNYRVIDVDNHYYEPLDSFTRHLDKKFKRRGVQMLSDGKRTWAVIGDRVNHFIPNPT
CCEEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCC
FDPIIVPGCLDLLFRGEIPDGVDPASLMKVERLADHPEYQNRDARIAVMDEQDIETAFML
CCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEC
PTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSLADPTRAVEEV
CCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEECHHHHHCCHHHHHHHH
DFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSGYLHIAA
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEE
AWGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFTRHPKLKAVSIENGSYFVHR
ECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
LIKRLKKAANTQPQYFPEDPVEQLRNNVWIAPYYEDDLPELARVIGVDKILFGSDWPHGE
HHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHHEEECCCCCCCC
GLASPVSFTAELKGFSESDIRKIMRDNALDLLGVQVGSAA
CCCCCHHHHHHHCCCCHHHHHHHHHCCCHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA