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The map label for this gene is yngJ [H]

Identifier: 41408461

GI number: 41408461

Start: 2655540

End: 2656688

Strand: Reverse

Name: yngJ [H]

Synonym: MAP2363c

Alternate gene names: 41408461

Gene position: 2656688-2655540 (Counterclockwise)

Preceding gene: 41408462

Following gene: 41408460

Centisome position: 55.01

GC content: 69.36

Gene sequence:

>1149_bases
ATGAGCACCGTCGACTCCCCGGAAAAGATCCTCTTCACCTCGACCACCCAAGCTTTCCTGGAAAAGGAGGCGCCGCTGCG
TCGGGTGCGGGAGCTGCATGCCGCCGGCACCGCGTTCGACCCCGGCTGGTGGCGGCGCGCCGCCGAGCTCGGCTGGACGG
GCCTGCTGGTTCCCGAAGAGTTGGGCGGCGGCAGCGTCTCGGAGAGCGGCCTGGCCGATCTGGCGACGGTCGCCGAACAA
CTCGGCAAGACCGTCGCGCCCGGCCCGCTGTACCCGGTCAGCATCGTGCTGTCGGCGCTGGCCGAATGTTCCGGCGCCGA
AACGCACGGCGACGTCATCGAGGCGCTGATCTCCGGTGAAACCGTCGCGTCCTGGGCGGTGTATGAACCGGGTCAGGGCT
GGGCGCCGCTGAATCCGTCGGTGACGGCCACCGAAACCGACTCCGGTTATCGCATCGACGGCGTCAAGGACCGCGTGGAG
GCGGGCGCCCAGAGCGCGCTGCTGCTGGTGGTCGCGCGCTGCGGCGCCGACGGGCAGATCCGCCAGTTCCTGGTCCCGAC
GGACACGCCGGGGGTGCGGATCGAGCCCCAGCAGTCGGTGGACCTGGTCAAGCAGTACGCCCGGGTGCACTTCGACGGTG
TCGTCGTGCCGCGGTCCGCCGCGGTCGGCACCGCCGCCGAGACCGCCACCCTGATCGAGCGACAAAGCCAGCTCGGCCAG
GTGCTGCAATGCGCCGAGGTGGTCGGGGTGGTGCAGACGGTGTTCGACTTCACCACCCAATGGGCGCTGGACCGGCACAC
CTTCGGTCGTCCGCTGGCGTCGTATCAGGCCCTCAAACACAAGTTCGCCGACATGAAGCTATGGCTGGAGGCATGCCGGG
CCACCACCTGGGCGGCGGTCGCCGAGGTGGCCGCCCGCTCGCCGCAGGCGGGGCTGTCGGCCAGCATCGCCAAGTCCTAT
GTGGGCGAGATGGCCGGGCAGATCGTGCAGGCCTGCGTGCAGATGCACGGCGGTATCGGCGTCACCTGGGAACACGACCT
GCACCTGTACCTGCGCCGGGTTACGTTGTACCGCGGCATGTTCGGCACGCCGGAGGAACACAACCTGCGCGTCTACCAGT
TCGAGAAGGCGGGGCGTGCGGCGAAATGA

Upstream 100 bases:

>100_bases
CGGCAGCCAACCGAGGACCGATCGGGCGGATGATCAAACACTCAAACCGATTCCGTTGCACCCGCAGCGATCGAATGTCA
CGAAGGATCCCCTCGGCACC

Downstream 100 bases:

>100_bases
CGACCGAATCCGTCGCGCAATTCGCGGCCCGGGCGCGAGCCTGGTTGGCCGACAACATGCCCGCCATCGACCGCGAGTCC
CCACCACCGGCCCCGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSTVDSPEKILFTSTTQAFLEKEAPLRRVRELHAAGTAFDPGWWRRAAELGWTGLLVPEELGGGSVSESGLADLATVAEQ
LGKTVAPGPLYPVSIVLSALAECSGAETHGDVIEALISGETVASWAVYEPGQGWAPLNPSVTATETDSGYRIDGVKDRVE
AGAQSALLLVVARCGADGQIRQFLVPTDTPGVRIEPQQSVDLVKQYARVHFDGVVVPRSAAVGTAAETATLIERQSQLGQ
VLQCAEVVGVVQTVFDFTTQWALDRHTFGRPLASYQALKHKFADMKLWLEACRATTWAAVAEVAARSPQAGLSASIAKSY
VGEMAGQIVQACVQMHGGIGVTWEHDLHLYLRRVTLYRGMFGTPEEHNLRVYQFEKAGRAAK

Sequences:

>Translated_382_residues
MSTVDSPEKILFTSTTQAFLEKEAPLRRVRELHAAGTAFDPGWWRRAAELGWTGLLVPEELGGGSVSESGLADLATVAEQ
LGKTVAPGPLYPVSIVLSALAECSGAETHGDVIEALISGETVASWAVYEPGQGWAPLNPSVTATETDSGYRIDGVKDRVE
AGAQSALLLVVARCGADGQIRQFLVPTDTPGVRIEPQQSVDLVKQYARVHFDGVVVPRSAAVGTAAETATLIERQSQLGQ
VLQCAEVVGVVQTVFDFTTQWALDRHTFGRPLASYQALKHKFADMKLWLEACRATTWAAVAEVAARSPQAGLSASIAKSY
VGEMAGQIVQACVQMHGGIGVTWEHDLHLYLRRVTLYRGMFGTPEEHNLRVYQFEKAGRAAK
>Mature_381_residues
STVDSPEKILFTSTTQAFLEKEAPLRRVRELHAAGTAFDPGWWRRAAELGWTGLLVPEELGGGSVSESGLADLATVAEQL
GKTVAPGPLYPVSIVLSALAECSGAETHGDVIEALISGETVASWAVYEPGQGWAPLNPSVTATETDSGYRIDGVKDRVEA
GAQSALLLVVARCGADGQIRQFLVPTDTPGVRIEPQQSVDLVKQYARVHFDGVVVPRSAAVGTAAETATLIERQSQLGQV
LQCAEVVGVVQTVFDFTTQWALDRHTFGRPLASYQALKHKFADMKLWLEACRATTWAAVAEVAARSPQAGLSASIAKSYV
GEMAGQIVQACVQMHGGIGVTWEHDLHLYLRRVTLYRGMFGTPEEHNLRVYQFEKAGRAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=368, Percent_Identity=26.3586956521739, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI4557233, Length=391, Percent_Identity=26.0869565217391, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4501857, Length=353, Percent_Identity=24.0793201133144, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI4557231, Length=339, Percent_Identity=25.6637168141593, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI187960098, Length=339, Percent_Identity=25.6637168141593, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI7656849, Length=327, Percent_Identity=24.4648318042813, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4557235, Length=339, Percent_Identity=24.4837758112094, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI76496475, Length=339, Percent_Identity=24.4837758112094, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI21361497, Length=339, Percent_Identity=23.3038348082596, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI226958412, Length=341, Percent_Identity=22.5806451612903, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI226958414, Length=341, Percent_Identity=22.5806451612903, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI4503943, Length=335, Percent_Identity=25.6716417910448, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87081958, Length=370, Percent_Identity=23.2432432432432, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786223, Length=324, Percent_Identity=23.1481481481481, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=331, Percent_Identity=26.5861027190332, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17570075, Length=332, Percent_Identity=24.0963855421687, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17569725, Length=333, Percent_Identity=26.1261261261261, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17506239, Length=363, Percent_Identity=24.2424242424242, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=327, Percent_Identity=26.605504587156, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=385, Percent_Identity=23.3766233766234, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=281, Percent_Identity=27.0462633451957, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71985184, Length=327, Percent_Identity=25.6880733944954, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24666513, Length=362, Percent_Identity=26.7955801104972, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24646207, Length=327, Percent_Identity=26.9113149847095, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=24.1935483870968, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24660351, Length=359, Percent_Identity=25.3481894150418, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21355753, Length=362, Percent_Identity=24.0331491712707, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281363737, Length=331, Percent_Identity=22.3564954682779, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41084; Mature: 40953

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVDSPEKILFTSTTQAFLEKEAPLRRVRELHAAGTAFDPGWWRRAAELGWTGLLVPEE
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCHH
LGGGSVSESGLADLATVAEQLGKTVAPGPLYPVSIVLSALAECSGAETHGDVIEALISGE
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
TVASWAVYEPGQGWAPLNPSVTATETDSGYRIDGVKDRVEAGAQSALLLVVARCGADGQI
CCEEEEEECCCCCCCCCCCCCEEEECCCCEEECCHHHHHHHCHHHHHHHHHHHCCCCCCE
RQFLVPTDTPGVRIEPQQSVDLVKQYARVHFDGVVVPRSAAVGTAAETATLIERQSQLGQ
EEEECCCCCCCEEECCHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHH
VLQCAEVVGVVQTVFDFTTQWALDRHTFGRPLASYQALKHKFADMKLWLEACRATTWAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVAARSPQAGLSASIAKSYVGEMAGQIVQACVQMHGGIGVTWEHDLHLYLRRVTLYRGM
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCC
FGTPEEHNLRVYQFEKAGRAAK
CCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
STVDSPEKILFTSTTQAFLEKEAPLRRVRELHAAGTAFDPGWWRRAAELGWTGLLVPEE
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCHH
LGGGSVSESGLADLATVAEQLGKTVAPGPLYPVSIVLSALAECSGAETHGDVIEALISGE
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
TVASWAVYEPGQGWAPLNPSVTATETDSGYRIDGVKDRVEAGAQSALLLVVARCGADGQI
CCEEEEEECCCCCCCCCCCCCEEEECCCCEEECCHHHHHHHCHHHHHHHHHHHCCCCCCE
RQFLVPTDTPGVRIEPQQSVDLVKQYARVHFDGVVVPRSAAVGTAAETATLIERQSQLGQ
EEEECCCCCCCEEECCHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHH
VLQCAEVVGVVQTVFDFTTQWALDRHTFGRPLASYQALKHKFADMKLWLEACRATTWAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVAARSPQAGLSASIAKSYVGEMAGQIVQACVQMHGGIGVTWEHDLHLYLRRVTLYRGM
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCC
FGTPEEHNLRVYQFEKAGRAAK
CCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]