| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is lipQ
Identifier: 41408399
GI number: 41408399
Start: 2580394
End: 2581665
Strand: Reverse
Name: lipQ
Synonym: MAP2301c
Alternate gene names: NA
Gene position: 2581665-2580394 (Counterclockwise)
Preceding gene: 41408401
Following gene: 41408398
Centisome position: 53.45
GC content: 71.38
Gene sequence:
>1272_bases ATGACGTCGAGGGGTGACGTGGCAATGAGCGTGGCCGGCGATCTCACTTCGCGCTGCTCCTGGGCCGGCGCCCAGGCGGC CCGCCTGGCGGCCGAGGCCCGGGACGTCTATCAGCTCGGCAATCTGGTGCTGCGCGGCGGGCCGTTCGCGCTGGGCTGTT TCGCCGGTTGGCTTTTCACGGAGTTTCCGCCGCACGTGCTCACCGGACACGCGCTGTCGCGGGTCTCGCATCCCTCCATC GGCCGGGTGGGCAAAACACTGGCCACGCAGCGCGCCGATCACACCCTGACCGCGGCGCTGCAGGAGTCGCTCGGCCCCGA TTTCCGGGACCAGGTATGCCACCCGACCAGCGTGGCGTCGGTGTGCGCCCGGCGGGGTGGCCTGCTGGGGCGGCCGGGGC CGCACCGCCGCTACGCGGCGCAGACTTCCGACATCTCCTACGGTCCGGGCGGGCGCGACAACCTGCTGGACATCTGGCGG CGCGACGACCTGGCGCCCGGCTGCCGCGCACCGGTGCTGATCCAGGTGCCCGGCGGCGCGTGGGCGCTCAACGGCCGGCG CCCGCAGGCCTACACGTTGATGAGCCGGATGGTGCTGCTCGGCTGGATCTGCGTCTCGATCGACTACAGCAAGAGTCCGC GCAGCACCTTCCCGGCGCACCTGATCGACGTCAAACGGGCGATCGCCTGGGTGCGGGAGAACATCGCCGACTACGGCGGG GACCCCGACTTCATCGCGATCACCGGCGGTTCGGCCGGCGGGCACCTGGCCTCGCTGGCCGCGCTCACCCCCAACGACCC GGCCTTTCAGCCCGGCTTCGAAAACGCCGACACCGCCGTGCAGGCCGTCGCGCCCTATTACGGCGTCTACGACTTCACCG ACTTCGAGAACATGCACCCGCTGATGGTCCCGTTCCTCGAGCAGTTCGTGCTCAAGGCCCGCTACGCCGACGACCCGCAG CGGTTCGCCGCCGCCTCGCCGATCTCCTACGTGCACGCCGACGCGCCGCCGTTCTTCGTGTTGCACGGCCAGAAGGACGA ATTGGTGCCCAGTGGCCAGGCCCGGGCGTTCTGCGCGGCGCTGCGCGCGGCCGGCGCCCGCACGGTGGGCCACGCCGAAC TGAGCAACGCGCACCACGCCTTCGACATCACCCCCACCGTCCGGTCCCGGCTGGCCGCCGACGCCGTCGCCGATTTCCTG GGCGTGGTCTACGGGCGGCGCGTCAGCTCGCTGGTGGATTCGCTGCCGCTGTCGGCGACTTCCGCCAGTTGA
Upstream 100 bases:
>100_bases TGAAAAGCCTTCCCGCGCCGTGGGTATCGGTTATCGTGTGGACCTCGACACACGTTCATCATCGGTCGGCAACGGGCCGT TAACCGAACGAGGCGTGTGC
Downstream 100 bases:
>100_bases ACGCCGGCTGAGCCGCAGTCGAGCGCCGGTTGAGCCACAGTCTTCGCCGCTTCTTTCACCAGCGCGGCAACCCGACTAGC GTTGTGGAGACCACCGCGGC
Product: LipQ
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold-3 Domain Protein; Esterase/Lipase; Lipase/Esterase; Alpha/Beta Hydrolase; Esterase; Esterase LipO; Esterase/Lipase-Like Protein; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Carboxylesterase LipQ; Alpha/Beta Hydrolase Fold Domain Protein; Pectinesterase; Membrane-Bound Esterase LipM; Triacylglycerol Lipase; Carboxylesterase Family Protein; Lipase; Esterase LipC; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Peptidase S9A/B/C Families; Esterase/Lipase/Thioesterase; Esterase LipM; Dienelactone Hydrolase; Esterase/Lipase/Thioesterase Family Protein
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTSRGDVAMSVAGDLTSRCSWAGAQAARLAAEARDVYQLGNLVLRGGPFALGCFAGWLFTEFPPHVLTGHALSRVSHPSI GRVGKTLATQRADHTLTAALQESLGPDFRDQVCHPTSVASVCARRGGLLGRPGPHRRYAAQTSDISYGPGGRDNLLDIWR RDDLAPGCRAPVLIQVPGGAWALNGRRPQAYTLMSRMVLLGWICVSIDYSKSPRSTFPAHLIDVKRAIAWVRENIADYGG DPDFIAITGGSAGGHLASLAALTPNDPAFQPGFENADTAVQAVAPYYGVYDFTDFENMHPLMVPFLEQFVLKARYADDPQ RFAAASPISYVHADAPPFFVLHGQKDELVPSGQARAFCAALRAAGARTVGHAELSNAHHAFDITPTVRSRLAADAVADFL GVVYGRRVSSLVDSLPLSATSAS
Sequences:
>Translated_423_residues MTSRGDVAMSVAGDLTSRCSWAGAQAARLAAEARDVYQLGNLVLRGGPFALGCFAGWLFTEFPPHVLTGHALSRVSHPSI GRVGKTLATQRADHTLTAALQESLGPDFRDQVCHPTSVASVCARRGGLLGRPGPHRRYAAQTSDISYGPGGRDNLLDIWR RDDLAPGCRAPVLIQVPGGAWALNGRRPQAYTLMSRMVLLGWICVSIDYSKSPRSTFPAHLIDVKRAIAWVRENIADYGG DPDFIAITGGSAGGHLASLAALTPNDPAFQPGFENADTAVQAVAPYYGVYDFTDFENMHPLMVPFLEQFVLKARYADDPQ RFAAASPISYVHADAPPFFVLHGQKDELVPSGQARAFCAALRAAGARTVGHAELSNAHHAFDITPTVRSRLAADAVADFL GVVYGRRVSSLVDSLPLSATSAS >Mature_422_residues TSRGDVAMSVAGDLTSRCSWAGAQAARLAAEARDVYQLGNLVLRGGPFALGCFAGWLFTEFPPHVLTGHALSRVSHPSIG RVGKTLATQRADHTLTAALQESLGPDFRDQVCHPTSVASVCARRGGLLGRPGPHRRYAAQTSDISYGPGGRDNLLDIWRR DDLAPGCRAPVLIQVPGGAWALNGRRPQAYTLMSRMVLLGWICVSIDYSKSPRSTFPAHLIDVKRAIAWVRENIADYGGD PDFIAITGGSAGGHLASLAALTPNDPAFQPGFENADTAVQAVAPYYGVYDFTDFENMHPLMVPFLEQFVLKARYADDPQR FAAASPISYVHADAPPFFVLHGQKDELVPSGQARAFCAALRAAGARTVGHAELSNAHHAFDITPTVRSRLAADAVADFLG VVYGRRVSSLVDSLPLSATSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45189; Mature: 45057
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRGDVAMSVAGDLTSRCSWAGAQAARLAAEARDVYQLGNLVLRGGPFALGCFAGWLFT CCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHH EFPPHVLTGHALSRVSHPSIGRVGKTLATQRADHTLTAALQESLGPDFRDQVCHPTSVAS CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCHHHHH VCARRGGLLGRPGPHRRYAAQTSDISYGPGGRDNLLDIWRRDDLAPGCRAPVLIQVPGGA HHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCE WALNGRRPQAYTLMSRMVLLGWICVSIDYSKSPRSTFPAHLIDVKRAIAWVRENIADYGG EEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC DPDFIAITGGSAGGHLASLAALTPNDPAFQPGFENADTAVQAVAPYYGVYDFTDFENMHP CCCEEEEECCCCCCHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH LMVPFLEQFVLKARYADDPQRFAAASPISYVHADAPPFFVLHGQKDELVPSGQARAFCAA HHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHH LRAAGARTVGHAELSNAHHAFDITPTVRSRLAADAVADFLGVVYGRRVSSLVDSLPLSAT HHHCCCCCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SAS CCC >Mature Secondary Structure TSRGDVAMSVAGDLTSRCSWAGAQAARLAAEARDVYQLGNLVLRGGPFALGCFAGWLFT CCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHH EFPPHVLTGHALSRVSHPSIGRVGKTLATQRADHTLTAALQESLGPDFRDQVCHPTSVAS CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCHHHHH VCARRGGLLGRPGPHRRYAAQTSDISYGPGGRDNLLDIWRRDDLAPGCRAPVLIQVPGGA HHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCE WALNGRRPQAYTLMSRMVLLGWICVSIDYSKSPRSTFPAHLIDVKRAIAWVRENIADYGG EEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC DPDFIAITGGSAGGHLASLAALTPNDPAFQPGFENADTAVQAVAPYYGVYDFTDFENMHP CCCEEEEECCCCCCHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH LMVPFLEQFVLKARYADDPQRFAAASPISYVHADAPPFFVLHGQKDELVPSGQARAFCAA HHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHH LRAAGARTVGHAELSNAHHAFDITPTVRSRLAADAVADFLGVVYGRRVSSLVDSLPLSAT HHHCCCCCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SAS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA