| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408398
Identifier: 41408398
GI number: 41408398
Start: 2578761
End: 2580230
Strand: Reverse
Name: 41408398
Synonym: MAP2300c
Alternate gene names: NA
Gene position: 2580230-2578761 (Counterclockwise)
Preceding gene: 41408399
Following gene: 41408397
Centisome position: 53.42
GC content: 70.14
Gene sequence:
>1470_bases ATGACTGAGTCCGTCGAGACGATCAAATTGTCCGACGAGCTCGGGCCGGTCGACTACCTCATGCATCGGGGCGAGGCGAA TCCCCGAACCCGGTCGGGCATCATGGCGCTGGAGCTCCTCGACACCACCCCGGACTGGCAGCAGTTCCGGGCGCGATTCG AAAACGCCTCCCGGCGGGTGCTGCGGCTTCGGCAGAAGGTGGTGGTGCCGACCCTGCCCACCGCCGCGCCGCGCTGGGTC ATCGATCCCGACTTCAACCTCGATTTCCACGTGCGCCGGGTGCGGGTCGCCGAACCCGGCACGCTGCGTGAGGTATTCGA CCTCGCCGAGCTCATCCTGCAGTCGCCGATGGACATCTCCCGGCCGCTGTGGACGGCCACCCTGGTCGACGGTCTGGCCG ACGGGAAAGCCGCGACGCTGCTGCACGTCAGCCACGCCGTCACCGACGGTGTCGGCGGGGTCCAGATGTTCGCCGAAATC TATGACCTGGAACGCAATCCACCGCCCAAGCCGCCGCCGCCGCTGCCCGTCCCGCAAGACCTGTCGCCCAATGACCTGAT GCGGCAAGGCATTAACCACCTGCCGTTCGCGGTGGTGGGCGGTGTCGTGAGCGCGCTGTCCGGGGCGGTGTCGGTGGCCG GTCGGGCGGTGCTGGAGCCGGCGTCCACCGTGTCGGGGATCGTCGGGTACGCCATGTCGGGCATGCGGGTGCTCAACCGG GCCGCCGAGCCGTCGCCGCTGCTGCGCCGGCGCAGCCTGGCCACCCGCAGCGAAGCGATCGACATCCCGCTCGCCGACCT GCACAAGGCCGCCAAGGCCGGCGGCGGATCGATCAACGACGCCTACCTCGCCGGGCTGTGCGGCGCCTTGCGGCGCTACC ACGAGGTGTTCGGGGTGCCGATCAGCACGCTGCCGATGGCGGTGCCGGTCAACCTGCGCGCCGAGGCCGACACCGTCGGC GGCAACCGGTTCACCGGGGTCAACCTGGCCGCGCCGATCGGCACCGTCGACCCGGTCTCCCGGATGAAGAAGATCCGCGC CCAGATGACCCAGCGCCGCGACGAGCCCGCGATGAACATCATCGGCTCGCTGGCGCCGGTGCTCAGCGTGTTGCCCACCG CGGTGCTGGAAGGGATCACCGGCTCGGTGATCGGCTCCGACGTGCAGGCCAGCAACGTTCCCGTCTTCCCCGGAGACACC TACATCGCCGGTGCAAAGGTGTTGCGCCAGTACGGGATCGGACCGCTGCCCGGGGTGGCGATGATGGTGGTGCTGATCTC CCGGGGCGGGTGGTGCACCATCACGGTGCGCTACGACCGGGCCTCGGTGCGCGACGAGGCGTTGTTCGCCCAGTGCCTGC TGGAGGGTTTCGACGAGATCCTGGCCCTGGCCGGTGACGGCGCGCCGCGCGCGGTGCCCGCCTCGTTCACGGAGTCCGCC GTGTCGGCGCGATCGGCCAGCGGCTCATGA
Upstream 100 bases:
>100_bases GCGGCAACCCGACTAGCGTTGTGGAGACCACCGCGGCGGACGGGCGCAAGGCAGGAGGCTTGATCGACGGTGACAAGGTT GGCGCGTCGAGCTGATGACC
Downstream 100 bases:
>100_bases GCGATTCGCGTCAGCTGTCACCGCAGCGCGGCACCGAGGATTCCGGGCCGCGGGAGACCGACATGCGGCTGCCGGGCTCG GTCGCCGAGATCATGGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Putative triacylglycerol synthase Rv2484c/MT2557 [H]
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MTESVETIKLSDELGPVDYLMHRGEANPRTRSGIMALELLDTTPDWQQFRARFENASRRVLRLRQKVVVPTLPTAAPRWV IDPDFNLDFHVRRVRVAEPGTLREVFDLAELILQSPMDISRPLWTATLVDGLADGKAATLLHVSHAVTDGVGGVQMFAEI YDLERNPPPKPPPPLPVPQDLSPNDLMRQGINHLPFAVVGGVVSALSGAVSVAGRAVLEPASTVSGIVGYAMSGMRVLNR AAEPSPLLRRRSLATRSEAIDIPLADLHKAAKAGGGSINDAYLAGLCGALRRYHEVFGVPISTLPMAVPVNLRAEADTVG GNRFTGVNLAAPIGTVDPVSRMKKIRAQMTQRRDEPAMNIIGSLAPVLSVLPTAVLEGITGSVIGSDVQASNVPVFPGDT YIAGAKVLRQYGIGPLPGVAMMVVLISRGGWCTITVRYDRASVRDEALFAQCLLEGFDEILALAGDGAPRAVPASFTESA VSARSASGS
Sequences:
>Translated_489_residues MTESVETIKLSDELGPVDYLMHRGEANPRTRSGIMALELLDTTPDWQQFRARFENASRRVLRLRQKVVVPTLPTAAPRWV IDPDFNLDFHVRRVRVAEPGTLREVFDLAELILQSPMDISRPLWTATLVDGLADGKAATLLHVSHAVTDGVGGVQMFAEI YDLERNPPPKPPPPLPVPQDLSPNDLMRQGINHLPFAVVGGVVSALSGAVSVAGRAVLEPASTVSGIVGYAMSGMRVLNR AAEPSPLLRRRSLATRSEAIDIPLADLHKAAKAGGGSINDAYLAGLCGALRRYHEVFGVPISTLPMAVPVNLRAEADTVG GNRFTGVNLAAPIGTVDPVSRMKKIRAQMTQRRDEPAMNIIGSLAPVLSVLPTAVLEGITGSVIGSDVQASNVPVFPGDT YIAGAKVLRQYGIGPLPGVAMMVVLISRGGWCTITVRYDRASVRDEALFAQCLLEGFDEILALAGDGAPRAVPASFTESA VSARSASGS >Mature_488_residues TESVETIKLSDELGPVDYLMHRGEANPRTRSGIMALELLDTTPDWQQFRARFENASRRVLRLRQKVVVPTLPTAAPRWVI DPDFNLDFHVRRVRVAEPGTLREVFDLAELILQSPMDISRPLWTATLVDGLADGKAATLLHVSHAVTDGVGGVQMFAEIY DLERNPPPKPPPPLPVPQDLSPNDLMRQGINHLPFAVVGGVVSALSGAVSVAGRAVLEPASTVSGIVGYAMSGMRVLNRA AEPSPLLRRRSLATRSEAIDIPLADLHKAAKAGGGSINDAYLAGLCGALRRYHEVFGVPISTLPMAVPVNLRAEADTVGG NRFTGVNLAAPIGTVDPVSRMKKIRAQMTQRRDEPAMNIIGSLAPVLSVLPTAVLEGITGSVIGSDVQASNVPVFPGDTY IAGAKVLRQYGIGPLPGVAMMVVLISRGGWCTITVRYDRASVRDEALFAQCLLEGFDEILALAGDGAPRAVPASFTESAV SARSASGS
Specific function: Upon expression in E.coli functions very weakly as a triacylglycerol synthase, making triacylglycerol (TG) from diolein and long-chain fatty acyl-CoA. Has no wax synthase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the long-chain O-acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014292 - InterPro: IPR004255 [H]
Pfam domain/function: PF03007 UPF0089 [H]
EC number: =2.3.1.20 [H]
Molecular weight: Translated: 52085; Mature: 51953
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESVETIKLSDELGPVDYLMHRGEANPRTRSGIMALELLDTTPDWQQFRARFENASRRV CCCCCCEEEECCCCCHHHHHHHCCCCCCCHHCCEEEEEEECCCCCHHHHHHHHHHHHHHH LRLRQKVVVPTLPTAAPRWVIDPDFNLDFHVRRVRVAEPGTLREVFDLAELILQSPMDIS HHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCC RPLWTATLVDGLADGKAATLLHVSHAVTDGVGGVQMFAEIYDLERNPPPKPPPPLPVPQD CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC LSPNDLMRQGINHLPFAVVGGVVSALSGAVSVAGRAVLEPASTVSGIVGYAMSGMRVLNR CCHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAEPSPLLRRRSLATRSEAIDIPLADLHKAAKAGGGSINDAYLAGLCGALRRYHEVFGVP CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC ISTLPMAVPVNLRAEADTVGGNRFTGVNLAAPIGTVDPVSRMKKIRAQMTQRRDEPAMNI HHHCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH IGSLAPVLSVLPTAVLEGITGSVIGSDVQASNVPVFPGDTYIAGAKVLRQYGIGPLPGVA HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH MMVVLISRGGWCTITVRYDRASVRDEALFAQCLLEGFDEILALAGDGAPRAVPASFTESA HHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH VSARSASGS HHHHCCCCC >Mature Secondary Structure TESVETIKLSDELGPVDYLMHRGEANPRTRSGIMALELLDTTPDWQQFRARFENASRRV CCCCCEEEECCCCCHHHHHHHCCCCCCCHHCCEEEEEEECCCCCHHHHHHHHHHHHHHH LRLRQKVVVPTLPTAAPRWVIDPDFNLDFHVRRVRVAEPGTLREVFDLAELILQSPMDIS HHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCC RPLWTATLVDGLADGKAATLLHVSHAVTDGVGGVQMFAEIYDLERNPPPKPPPPLPVPQD CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC LSPNDLMRQGINHLPFAVVGGVVSALSGAVSVAGRAVLEPASTVSGIVGYAMSGMRVLNR CCHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAEPSPLLRRRSLATRSEAIDIPLADLHKAAKAGGGSINDAYLAGLCGALRRYHEVFGVP CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC ISTLPMAVPVNLRAEADTVGGNRFTGVNLAAPIGTVDPVSRMKKIRAQMTQRRDEPAMNI HHHCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH IGSLAPVLSVLPTAVLEGITGSVIGSDVQASNVPVFPGDTYIAGAKVLRQYGIGPLPGVA HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH MMVVLISRGGWCTITVRYDRASVRDEALFAQCLLEGFDEILALAGDGAPRAVPASFTESA HHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH VSARSASGS HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]