| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408371
Identifier: 41408371
GI number: 41408371
Start: 2540418
End: 2541068
Strand: Reverse
Name: 41408371
Synonym: MAP2273c
Alternate gene names: NA
Gene position: 2541068-2540418 (Counterclockwise)
Preceding gene: 41408373
Following gene: 41408370
Centisome position: 52.61
GC content: 74.96
Gene sequence:
>651_bases CTGGCCCGCCGCTGTCGTGCCCGACCCAGACGGCACGTCCCGAAGCAGGCATTCAACCAACAGCCTCAGCCCACCTTCGT GGGCTTGCTTTGGCGCGCGCGCACCGCGAAAGGAAGGATATTGAGGAACGTCCGCAAGACGCTCATTCTCGCCGCGGTCA CGGGCACGCTCGTGACCATCCCGTCCGCTACTGCTCACGCAGACGCGGAGCAGGTGGGCTTCGACCCGAACGTGCCGGCC GCCGGCCCCGCCCCGGACGCGCCACCGCCCCCGGCCCCGGATGCTCCGCCGGCCCCGGCTCCGGACGCCCCGCCGGCCCC GGACGCTCCGCCGCCCCCGGCTCCGGACGCCCCGCCGCCGGCCCCGGATGCGCCGCCGGCCCCGGGCCCGGACGTCCCGC CGCCTCCCGCTCCCAAGGCGTACAGCGTGAACTGGGACGCCATCGCGCAGTGCGAGTCGGGCGGCAACTGGGGGATCAAC ACCGGTAACGGCTACGCCGGTGGCCTGCAGTTCACCTCGAGCACCTGGCACGCCAACGGCGGCAGTGGCTCCCCGGCCGG CGCCAGCCGCGAGGAGCAGATCCGGGTCGCCGAGAACGTGCTGCACTCGCAGGGCATCGGCGCGTGGCCGGTGTGCGGCC GCCGCGGCTGA
Upstream 100 bases:
>100_bases GGAAGAGTAATCGAAAATTGAATCCACGGACCCGCGTGTGAGCGGCGGCACGGACGGCGACAGCCCGCCCGTGACCGGTG GGTGAAGCCCGCCGGCAGAC
Downstream 100 bases:
>100_bases TCGCAGCCATCCAAGAAGTGCCGGGCCTAGTGCCCGGCACTTCTTGGCTCCAGGGGTAGCGTCGGGCCGGTGACCGCAAC ACCGCGCGAATTCGACATTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglycosylase Domain-Containing Protein; Resuscitation-Promoting Factor RpfA; Resuscitation-Promoting Factor; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; M23 Family Secreted Peptidase; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfC; Resuscitation-Promoting Factor RpfE; Transglycosylase Family Protein; Transglycosylase-Like Domain Protein; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; Secreted Esterase; Resuscitation-Promoting Factor Rpfd; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; Cell Wall Catabolism Protein; FHA Domain-Containing Protein; Transglycosylase-Like Domain-Containing Protein; Resuscitation-Promoting Factor Rpfc; M24/M37 Family Peptidase
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTIPSATAHADAEQVGFDPNVPA AGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPPAPDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGIN TGNGYAGGLQFTSSTWHANGGSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG
Sequences:
>Translated_216_residues MARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTIPSATAHADAEQVGFDPNVPA AGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPPAPDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGIN TGNGYAGGLQFTSSTWHANGGSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG >Mature_215_residues ARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTIPSATAHADAEQVGFDPNVPAA GPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPPAPDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGINT GNGYAGGLQFTSSTWHANGGSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22177; Mature: 22046
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTI CCCCCCCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC PSATAHADAEQVGFDPNVPAAGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPP CCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGINTGNGYAGGLQFTSSTWHANG CCCCCCCCCCCCCCCCCCCEEECCHHHHHEECCCCCCCCCCCCCCCCCEEECCCEEECCC GSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTI CCCCCCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC PSATAHADAEQVGFDPNVPAAGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPP CCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGINTGNGYAGGLQFTSSTWHANG CCCCCCCCCCCCCCCCCCCEEECCHHHHHEECCCCCCCCCCCCCCCCCEEECCCEEECCC GSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA