| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ppe63 [H]
Identifier: 41408332
GI number: 41408332
Start: 2496186
End: 2497316
Strand: Direct
Name: ppe63 [H]
Synonym: MAP2234
Alternate gene names: 41408332
Gene position: 2496186-2497316 (Clockwise)
Preceding gene: 41408331
Following gene: 41408333
Centisome position: 51.68
GC content: 67.11
Gene sequence:
>1131_bases ATGAAGCAACTACTCGCAGGAGTGACGGCGCTGTTAAGTGTCAGTACCGCAGGGTATTTCGGCATCGGTACGGCAGCGGC CGACGGCGGGCCCATCGGCGGACCGCCCACCCCCGGCGCGCCGGGCGACCAGACCGCCTACGCTCTTGGCGGCGCGCATG TGTTGGGCATCCCCTACGACCAATACATCCGTATGGAGGGCGCGGACTGGTTTCCCGGCCAGCAGCGCCAAATCGTTCGC TACCCGGCCGGGCAGGTGCAGGGACACGTGCTCGAGCGACTCTTCCCGGGCATCGGCAAGCTCGACGAATCCTTCCCCGG CCTGGGCATGAACGGCCCGAGCGTGGGCGAATCGGTCGCCGAGGGGATCGACAATCTCGATGCGGCGATTCGCACCACCG GGCGCCCCGGCACCGCGATCGGCCTGTCGGAGGGCGCGTTCGTGGTCGACGGCGAGCAGGCCCGATTGGCGAACGACCCC ACCGCTCCCCCGCCGAACACGCTGAACTTCGCCACGTTCGGCGACCCGATCGGGCGGCACGCCTTCGGTCAGAGCTTTCT GACCGCCATGTTCGGAGTCGGCAGCGTCGTTCCCGCACTGGACTACACCATGCCGCCGCCGTACGAGAGCCAGTACGACA CCAACAGGTTCGTCGCCGCATACGACTCGATTGCGGACTTTCCCGATCGGCCGGACAACATGTTCGCGCTCGCCAACACG CTGATGGGGCTGGCGACGGGTCACACCGCGGTGGCCTTCACCAATCCGAGCATGGTGCCGCCGCAGAACATCAGAACCAC GATCAACTCCCGTGGCGCCAAAGACACCACGATCATGATCCCGGAAAAGCACCTTCCGCTGGTGATGCCGCTGAGATACA TCGGGATCGACGAAAACACGCTGAACAAGCTCGATGCGATCCTGACCCCCCGGGTGAACGCGGGCTATTCACGCAACGAC GACCCGGCGACCGCCCCGGTGCAGGTGGACCCGGTGCACGGCTTCGACCCGGCCGAGGTCACCGCGCCGGCCAACCAGGC GACGTTCGGCGGCGGCGCCGACCCGCTGTCGCAGATCATGGCCGGGGCCATGTCCGTGTTGTCGCACGGCGCGGGCGAAG CCGACCACTGA
Upstream 100 bases:
>100_bases GCCAACTGGTGGCCGTCACGCATGGCCGTCCGGCGGAACCCGGTTAGCGAGCAGCCATGACGTATGTGAGACTAGAGAAG CCGACGGGTCAGGAGTAGGG
Downstream 100 bases:
>100_bases CTCCGAGCACGAAAAACCGACTATCAGTACGGACGTGATGTGATGCCTATGTCCCAGTCATCTATTCTGTCGATGCTGCA CGCACGGGCCAGCCTGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKQLLAGVTALLSVSTAGYFGIGTAAADGGPIGGPPTPGAPGDQTAYALGGAHVLGIPYDQYIRMEGADWFPGQQRQIVR YPAGQVQGHVLERLFPGIGKLDESFPGLGMNGPSVGESVAEGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDP TAPPPNTLNFATFGDPIGRHAFGQSFLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANT LMGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPLRYIGIDENTLNKLDAILTPRVNAGYSRND DPATAPVQVDPVHGFDPAEVTAPANQATFGGGADPLSQIMAGAMSVLSHGAGEADH
Sequences:
>Translated_376_residues MKQLLAGVTALLSVSTAGYFGIGTAAADGGPIGGPPTPGAPGDQTAYALGGAHVLGIPYDQYIRMEGADWFPGQQRQIVR YPAGQVQGHVLERLFPGIGKLDESFPGLGMNGPSVGESVAEGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDP TAPPPNTLNFATFGDPIGRHAFGQSFLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANT LMGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPLRYIGIDENTLNKLDAILTPRVNAGYSRND DPATAPVQVDPVHGFDPAEVTAPANQATFGGGADPLSQIMAGAMSVLSHGAGEADH >Mature_376_residues MKQLLAGVTALLSVSTAGYFGIGTAAADGGPIGGPPTPGAPGDQTAYALGGAHVLGIPYDQYIRMEGADWFPGQQRQIVR YPAGQVQGHVLERLFPGIGKLDESFPGLGMNGPSVGESVAEGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDP TAPPPNTLNFATFGDPIGRHAFGQSFLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANT LMGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPLRYIGIDENTLNKLDAILTPRVNAGYSRND DPATAPVQVDPVHGFDPAEVTAPANQATFGGGADPLSQIMAGAMSVLSHGAGEADH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013228 - InterPro: IPR000030 [H]
Pfam domain/function: PF08237 PE-PPE; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 39182; Mature: 39182
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLAGVTALLSVSTAGYFGIGTAAADGGPIGGPPTPGAPGDQTAYALGGAHVLGIPYD CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCHH QYIRMEGADWFPGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMNGPSVGESVA HEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHH EGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATFGDPIGRH HHHHHHHHHHCCCCCCCCEEECCCCEEEECCCHHHCCCCCCCCCCCCEEEHCCCCCHHHH AFGQSFLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHHHHH LMGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPLRYIGIDENT HHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCEEECCEEECCCHHH LNKLDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPANQATFGGGADPLSQIM HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHH AGAMSVLSHGAGEADH HHHHHHHHCCCCCCCC >Mature Secondary Structure MKQLLAGVTALLSVSTAGYFGIGTAAADGGPIGGPPTPGAPGDQTAYALGGAHVLGIPYD CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCHH QYIRMEGADWFPGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMNGPSVGESVA HEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHH EGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATFGDPIGRH HHHHHHHHHHCCCCCCCCEEECCCCEEEECCCHHHCCCCCCCCCCCCEEEHCCCCCHHHH AFGQSFLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHHHHH LMGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPLRYIGIDENT HHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCEEECCEEECCCHHH LNKLDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPANQATFGGGADPLSQIM HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHH AGAMSVLSHGAGEADH HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]