| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mmpL10 [H]
Identifier: 41408331
GI number: 41408331
Start: 2495636
End: 2496145
Strand: Direct
Name: mmpL10 [H]
Synonym: MAP2233
Alternate gene names: 41408331
Gene position: 2495636-2496145 (Clockwise)
Preceding gene: 41408330
Following gene: 41408332
Centisome position: 51.67
GC content: 65.29
Gene sequence:
>510_bases GTGGTGCTCCTGACGTTGATGGCGCTGCTGCGCGCGATCGTCGCGCCGCTGTATCTGGTTGCCACCGTGGTCATTTCGTA TTTGTCGGCGGTGGGGGTCGGCGTGTTGGTATTCCAATTTTTGCTCGGCCAGCAATTGCATTGGAGCGTGCCGCCACTGG CGTTCGTGGTGCTGGTCGCGGTGGGAGCCGACTACAACATGCTGCTGGTCTCCCGGATGCGTGACGAGTCGCCGCACAGC ATGCGCTACGGCATCATCCGCACCCTGAGTTCCACGGGTGGAGTGATTACCGCCGCGGGTCTGATCTTCGCGGCCTCGAT GTCCGGTCTGCTGTTCTCCAGCATCGGCACCGTGGTCCAGGGCGGTGTGGTGATCGGGGTGGGGATCCTGCTGGACACCT TCCTGGTGCGCACCGTCACCGTTCCCGCCATCGCGGCGCTGGCCGGGCGGGCCAACTGGTGGCCGTCACGCATGGCCGTC CGGCGGAACCCGGTTAGCGAGCAGCCATGA
Upstream 100 bases:
>100_bases CCGATGCCGAGGTGTCGATGGCCGGATACACCGTCGGCCTCAAAGACACCCGGGACTACTACCAGCACGACATCAAATTC ATCATCGCGGTCACCTGCTG
Downstream 100 bases:
>100_bases CGTATGTGAGACTAGAGAAGCCGACGGGTCAGGAGTAGGGATGAAGCAACTACTCGCAGGAGTGACGGCGCTGTTAAGTG TCAGTACCGCAGGGTATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MVLLTLMALLRAIVAPLYLVATVVISYLSAVGVGVLVFQFLLGQQLHWSVPPLAFVVLVAVGADYNMLLVSRMRDESPHS MRYGIIRTLSSTGGVITAAGLIFAASMSGLLFSSIGTVVQGGVVIGVGILLDTFLVRTVTVPAIAALAGRANWWPSRMAV RRNPVSEQP
Sequences:
>Translated_169_residues MVLLTLMALLRAIVAPLYLVATVVISYLSAVGVGVLVFQFLLGQQLHWSVPPLAFVVLVAVGADYNMLLVSRMRDESPHS MRYGIIRTLSSTGGVITAAGLIFAASMSGLLFSSIGTVVQGGVVIGVGILLDTFLVRTVTVPAIAALAGRANWWPSRMAV RRNPVSEQP >Mature_169_residues MVLLTLMALLRAIVAPLYLVATVVISYLSAVGVGVLVFQFLLGQQLHWSVPPLAFVVLVAVGADYNMLLVSRMRDESPHS MRYGIIRTLSSTGGVITAAGLIFAASMSGLLFSSIGTVVQGGVVIGVGILLDTFLVRTVTVPAIAALAGRANWWPSRMAV RRNPVSEQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 17920; Mature: 17920
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLTLMALLRAIVAPLYLVATVVISYLSAVGVGVLVFQFLLGQQLHWSVPPLAFVVLVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VGADYNMLLVSRMRDESPHSMRYGIIRTLSSTGGVITAAGLIFAASMSGLLFSSIGTVVQ HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GGVVIGVGILLDTFLVRTVTVPAIAALAGRANWWPSRMAVRRNPVSEQP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MVLLTLMALLRAIVAPLYLVATVVISYLSAVGVGVLVFQFLLGQQLHWSVPPLAFVVLVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VGADYNMLLVSRMRDESPHSMRYGIIRTLSSTGGVITAAGLIFAASMSGLLFSSIGTVVQ HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GGVVIGVGILLDTFLVRTVTVPAIAALAGRANWWPSRMAVRRNPVSEQP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]