| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408327
Identifier: 41408327
GI number: 41408327
Start: 2479220
End: 2479642
Strand: Direct
Name: 41408327
Synonym: MAP2229
Alternate gene names: NA
Gene position: 2479220-2479642 (Clockwise)
Preceding gene: 41408326
Following gene: 41408329
Centisome position: 51.33
GC content: 70.69
Gene sequence:
>423_bases ATGGCCGCGCTGTCCGCCGAGGTCGTCGAGTTCCTGTCCGCCGGCACCCGCACCGGGATGCTCGGCTATGTCGCCGCCGA CGGCCGGCCGCTGGTCGCGCCGATCTGGTTCGTGGTCGACGACGGCGAGCTGGCCTTCAACACCGGCCGTGGCACGGCGA AAGCCCGTGCGATAGCGCGTGATTCGCGGGTGGTCATCTGCGTCGACGATCCGCATCCGCCCTATTCGTTCGTCCAGGTG CAGGGCGTGGCCGCGGTGAGCGAGGACCCCGCCGAGGTGTTGGACATCGCCACCCGGACCGGCGCACGGTACATGGGCGC CGACCGGGCCGACGAGTTCGGCCGGCGTAACGCCGTCCCCGGCGAGTTGGTGGTGCGGATTCGGCCGACGAAGGTGAACT CCGCCTTCGACGTCGCCGACTGA
Upstream 100 bases:
>100_bases CGGCTCACCGCGATCGAGCACACCCTGGGCACCTCGGGTGAGCATCTGCACAACCTGATCGACCACCTCGGCGACTACGA CCTGGTCCGCCTCTAACCCC
Downstream 100 bases:
>100_bases ATCCCCGCCCGGATCAGCTCGGCTCGGGCGCCGCCTCACGTTCCGGTTCGGCCTCACCGGTGCCGGTTTCCGAGCCCGGA TTCGGGTTGGCGGCCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: PPOX Class; Pyridoxamine 5-Phosphate Oxidase-Related Protein; Pyridoxal 5-Phosphate Synthase
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAALSAEVVEFLSAGTRTGMLGYVAADGRPLVAPIWFVVDDGELAFNTGRGTAKARAIARDSRVVICVDDPHPPYSFVQV QGVAAVSEDPAEVLDIATRTGARYMGADRADEFGRRNAVPGELVVRIRPTKVNSAFDVAD
Sequences:
>Translated_140_residues MAALSAEVVEFLSAGTRTGMLGYVAADGRPLVAPIWFVVDDGELAFNTGRGTAKARAIARDSRVVICVDDPHPPYSFVQV QGVAAVSEDPAEVLDIATRTGARYMGADRADEFGRRNAVPGELVVRIRPTKVNSAFDVAD >Mature_139_residues AALSAEVVEFLSAGTRTGMLGYVAADGRPLVAPIWFVVDDGELAFNTGRGTAKARAIARDSRVVICVDDPHPPYSFVQVQ GVAAVSEDPAEVLDIATRTGARYMGADRADEFGRRNAVPGELVVRIRPTKVNSAFDVAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14878; Mature: 14747
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALSAEVVEFLSAGTRTGMLGYVAADGRPLVAPIWFVVDDGELAFNTGRGTAKARAIAR CCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEEECCEEEEECCCCCHHHHEEEC DSRVVICVDDPHPPYSFVQVQGVAAVSEDPAEVLDIATRTGARYMGADRADEFGRRNAVP CCEEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC GELVVRIRPTKVNSAFDVAD CEEEEEEECCCCCCEECCCC >Mature Secondary Structure AALSAEVVEFLSAGTRTGMLGYVAADGRPLVAPIWFVVDDGELAFNTGRGTAKARAIAR CCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEEECCEEEEECCCCCHHHHEEEC DSRVVICVDDPHPPYSFVQVQGVAAVSEDPAEVLDIATRTGARYMGADRADEFGRRNAVP CCEEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC GELVVRIRPTKVNSAFDVAD CEEEEEEECCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA