Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408313

Identifier: 41408313

GI number: 41408313

Start: 2461954

End: 2463912

Strand: Direct

Name: 41408313

Synonym: MAP2215

Alternate gene names: NA

Gene position: 2461954-2463912 (Clockwise)

Preceding gene: 41408307

Following gene: 41408316

Centisome position: 50.97

GC content: 68.81

Gene sequence:

>1959_bases
ATGGAGTCGTCGATCGACCTGCGCACACCCGGGCCGCTTGCTCCCAACGCAGCCCTGCGGAACCCGTTCCCCCCGATCGC
CGACTACGCATTCCTGTCCGACTGGGAAACCACCTGCCTGATCTCTCCGGCCGGGTCGGTGGAATGGATGTGTGTGCCCC
GACCGGACTCCCCGAGCGTGTTCGGGGCGATCCTGGACCGCAGCGCCGGCCATTTCCGGCTGGGACCCTACGGCGTGTCC
GTCCCGTCGGCCCGCCGCTACCTGCCCGGCAGCCTGATCATGGAAACCACCTGGCAGACCCACACGGGATGGCTGATCGT
GCGGGACGCGCTGGTCATGGGCCCCTGGCACGACCTGGAGCGACGCTCGCGCACCCACCGCCGCACCCCGATGGACTGGG
ACGCCGAGCACATCCTGCTGCGCACGGTGCGCTGCGTCAGCGGCACCGTCGAGCTGATGATGAGCTGCGAGCCGGCGTTC
GACTACCACCGCGTCGGCGCCACCTGGGAGTACTCCGCCAACGCCTACGGCGAGGCCATCGCCCGCGCCACCAAGCAGCC
CGACGCCCACCCGACGCTGCGGCTCACCACCAACCTGCGCATCGGGCTGGAAGGCCGGGAAGCCCGGGCCCGCACCCGGA
TGAAAGAGGGCGACGACGTGTTCGTCGCGCTGAGCTGGACCAAGCATCCGCCGCCGCAGACCTACCAGGAAGCCGCCGAC
AAGATGTGGCAGACCACCGAGTGCTGGCGGCAGTGGATCAACATCGGCAACTTCCCCGACCACCCGTGGCGGGCATACCT
GCAGCGCAGCGCGCTCACCCTGAAGGGGTTGACCTACTCCCCCACCGGTGCGCTGCTGGCCGCCAGCACCACGTCGCTAC
CGGAAACCCCTCAGGGCGAACGCAATTGGGATTACCGCTACGCCTGGGTGCGCGACTCGACCTTCGCGTTGTGGGGCCTG
TACACGCTGGGGCTGGACCGGGAGGCCGACGACTTCTTCGCCTTCATCGCCGACGTCTCCGGCGCCAACAACAACGAGCG
GCATCCGCTGCAGGTCATGTACGGGGTGGGCGGCGAGCGCAGCCTGGTCGAAGAGGAGCTGCACCACCTGTCCGGCTACG
ACCACGCCCGGCCGGTGCGCATCGGCAACGGCGCCTACGACCAGGTCCAGCACGACATCTGGGGCTCCATCCTGGACTCG
TTCTACCTGCACGCCAAGTCGCGCGAACAGGTTCCCGAGACGTTGTGGCCGGTGCTGAAGAAGCAGGTGGAAGAGGCGAT
CAAGCACTGGCGGGAGCCGGACCGCGGCATCTGGGAGGTGCGCGGGGAACCGCAGCACTTCACCTCGTCGAAGGTGATGT
GCTGGGTGGCGCTGGACCGCGGCGCCAAGCTGGCCGAGCGGCAGGGCGAGAAGAGCTACGCCCAGCAGTGGCGCAACATC
GCCGAGGAGATCAAGGCCGACATTTTGGCGCACGGCGTGGACTCCCGCGGGGTGTTCACCCAGCGCTACGGCAGCGACGC
GCTGGACGCCTCGCTGCTGTTGGTGGTGCTGACCCGGTTCCTGCCGCCCGACGACCCGCGGGTGCGCAACACCGTGCTGG
CGATCGCCGACGAACTCACCCAGGAGGGCCTGGTGCTGCGCTACCGGGTCGAAGAGACCGACGACGGGCTCTCCGGCGAG
GAGGGCACCTTCACCATCTGTTCGTTCTGGCTGGTCTCGGCGCTGGTCGAGATCGGCGAGGTGCGGCGCGCCAAGCGGCT
GTGTGAGCGGCTGCTGTCCTACGCCAGCCCGCTGCACCTCTACGCCGAGGAGATCGAACCGCGGACCGGTCGCCAGTTGG
GCAACTTCCCGCAGGCGTTCACCCACCTGGCGCTGATCAACGCGGTGGTGCACGTCATCCGCGCCGAGGAGGAAGCCGAC
GGCTCCGGGATGTTCCAGCCGGCCAACGCGCCCATGTGA

Upstream 100 bases:

>100_bases
CGCAGTCGATGATGTCCAGATGGTTCTGCACGCTCAACCCGACGACCAACCGGCCGACACCATGCCCGAGGAACCCTTCC
GCGCAGCCCCCGCGACGTCG

Downstream 100 bases:

>100_bases
GCCGCACCGGGGTCAGCCCAGCGCGCTGACCCGGTCCATCATCGCGTGCGCGATGTCGAGCGCGCTGGTGTTGAGGTCGG
CCGAGCCGGGGTCGGAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Trehalose-Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Trehalose 6-Phosphatase; Glycosyl Hydrolase Protein; Glycosyl Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase

Number of amino acids: Translated: 652; Mature: 652

Protein sequence:

>652_residues
MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSVFGAILDRSAGHFRLGPYGVS
VPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAF
DYHRVGATWEYSANAYGEAIARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD
KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGERNWDYRYAWVRDSTFALWGL
YTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGERSLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDS
FYLHAKSREQVPETLWPVLKKQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI
AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTQEGLVLRYRVEETDDGLSGE
EGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHLYAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEAD
GSGMFQPANAPM

Sequences:

>Translated_652_residues
MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSVFGAILDRSAGHFRLGPYGVS
VPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAF
DYHRVGATWEYSANAYGEAIARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD
KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGERNWDYRYAWVRDSTFALWGL
YTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGERSLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDS
FYLHAKSREQVPETLWPVLKKQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI
AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTQEGLVLRYRVEETDDGLSGE
EGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHLYAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEAD
GSGMFQPANAPM
>Mature_652_residues
MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSVFGAILDRSAGHFRLGPYGVS
VPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAF
DYHRVGATWEYSANAYGEAIARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD
KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGERNWDYRYAWVRDSTFALWGL
YTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGERSLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDS
FYLHAKSREQVPETLWPVLKKQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI
AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTQEGLVLRYRVEETDDGLSGE
EGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHLYAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEAD
GSGMFQPANAPM

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73775; Mature: 73775

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCHH
FGAILDRSAGHFRLGPYGVSVPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLE
HHHHHHCCCCCEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCEEEEECHHHCCCCHHHH
RRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRVGATWEYSANAYGEAI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCHHHHHH
ARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD
HHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHH
KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGE
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCEECCCCCEEEECCCCCCCCCCCC
RNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGER
CCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
SLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDSFYLHAKSREQVPETLWPVLK
HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHH
KQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI
HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHH
AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELT
HHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QEGLVLRYRVEETDDGLSGEEGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHL
HCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
YAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEADGSGMFQPANAPM
HHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCHH
FGAILDRSAGHFRLGPYGVSVPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLE
HHHHHHCCCCCEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCEEEEECHHHCCCCHHHH
RRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRVGATWEYSANAYGEAI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCHHHHHH
ARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD
HHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHH
KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGE
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCEECCCCCEEEECCCCCCCCCCCC
RNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGER
CCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
SLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDSFYLHAKSREQVPETLWPVLK
HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHH
KQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI
HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHH
AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELT
HHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QEGLVLRYRVEETDDGLSGEEGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHL
HCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
YAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEADGSGMFQPANAPM
HHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA