| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408313
Identifier: 41408313
GI number: 41408313
Start: 2461954
End: 2463912
Strand: Direct
Name: 41408313
Synonym: MAP2215
Alternate gene names: NA
Gene position: 2461954-2463912 (Clockwise)
Preceding gene: 41408307
Following gene: 41408316
Centisome position: 50.97
GC content: 68.81
Gene sequence:
>1959_bases ATGGAGTCGTCGATCGACCTGCGCACACCCGGGCCGCTTGCTCCCAACGCAGCCCTGCGGAACCCGTTCCCCCCGATCGC CGACTACGCATTCCTGTCCGACTGGGAAACCACCTGCCTGATCTCTCCGGCCGGGTCGGTGGAATGGATGTGTGTGCCCC GACCGGACTCCCCGAGCGTGTTCGGGGCGATCCTGGACCGCAGCGCCGGCCATTTCCGGCTGGGACCCTACGGCGTGTCC GTCCCGTCGGCCCGCCGCTACCTGCCCGGCAGCCTGATCATGGAAACCACCTGGCAGACCCACACGGGATGGCTGATCGT GCGGGACGCGCTGGTCATGGGCCCCTGGCACGACCTGGAGCGACGCTCGCGCACCCACCGCCGCACCCCGATGGACTGGG ACGCCGAGCACATCCTGCTGCGCACGGTGCGCTGCGTCAGCGGCACCGTCGAGCTGATGATGAGCTGCGAGCCGGCGTTC GACTACCACCGCGTCGGCGCCACCTGGGAGTACTCCGCCAACGCCTACGGCGAGGCCATCGCCCGCGCCACCAAGCAGCC CGACGCCCACCCGACGCTGCGGCTCACCACCAACCTGCGCATCGGGCTGGAAGGCCGGGAAGCCCGGGCCCGCACCCGGA TGAAAGAGGGCGACGACGTGTTCGTCGCGCTGAGCTGGACCAAGCATCCGCCGCCGCAGACCTACCAGGAAGCCGCCGAC AAGATGTGGCAGACCACCGAGTGCTGGCGGCAGTGGATCAACATCGGCAACTTCCCCGACCACCCGTGGCGGGCATACCT GCAGCGCAGCGCGCTCACCCTGAAGGGGTTGACCTACTCCCCCACCGGTGCGCTGCTGGCCGCCAGCACCACGTCGCTAC CGGAAACCCCTCAGGGCGAACGCAATTGGGATTACCGCTACGCCTGGGTGCGCGACTCGACCTTCGCGTTGTGGGGCCTG TACACGCTGGGGCTGGACCGGGAGGCCGACGACTTCTTCGCCTTCATCGCCGACGTCTCCGGCGCCAACAACAACGAGCG GCATCCGCTGCAGGTCATGTACGGGGTGGGCGGCGAGCGCAGCCTGGTCGAAGAGGAGCTGCACCACCTGTCCGGCTACG ACCACGCCCGGCCGGTGCGCATCGGCAACGGCGCCTACGACCAGGTCCAGCACGACATCTGGGGCTCCATCCTGGACTCG TTCTACCTGCACGCCAAGTCGCGCGAACAGGTTCCCGAGACGTTGTGGCCGGTGCTGAAGAAGCAGGTGGAAGAGGCGAT CAAGCACTGGCGGGAGCCGGACCGCGGCATCTGGGAGGTGCGCGGGGAACCGCAGCACTTCACCTCGTCGAAGGTGATGT GCTGGGTGGCGCTGGACCGCGGCGCCAAGCTGGCCGAGCGGCAGGGCGAGAAGAGCTACGCCCAGCAGTGGCGCAACATC GCCGAGGAGATCAAGGCCGACATTTTGGCGCACGGCGTGGACTCCCGCGGGGTGTTCACCCAGCGCTACGGCAGCGACGC GCTGGACGCCTCGCTGCTGTTGGTGGTGCTGACCCGGTTCCTGCCGCCCGACGACCCGCGGGTGCGCAACACCGTGCTGG CGATCGCCGACGAACTCACCCAGGAGGGCCTGGTGCTGCGCTACCGGGTCGAAGAGACCGACGACGGGCTCTCCGGCGAG GAGGGCACCTTCACCATCTGTTCGTTCTGGCTGGTCTCGGCGCTGGTCGAGATCGGCGAGGTGCGGCGCGCCAAGCGGCT GTGTGAGCGGCTGCTGTCCTACGCCAGCCCGCTGCACCTCTACGCCGAGGAGATCGAACCGCGGACCGGTCGCCAGTTGG GCAACTTCCCGCAGGCGTTCACCCACCTGGCGCTGATCAACGCGGTGGTGCACGTCATCCGCGCCGAGGAGGAAGCCGAC GGCTCCGGGATGTTCCAGCCGGCCAACGCGCCCATGTGA
Upstream 100 bases:
>100_bases CGCAGTCGATGATGTCCAGATGGTTCTGCACGCTCAACCCGACGACCAACCGGCCGACACCATGCCCGAGGAACCCTTCC GCGCAGCCCCCGCGACGTCG
Downstream 100 bases:
>100_bases GCCGCACCGGGGTCAGCCCAGCGCGCTGACCCGGTCCATCATCGCGTGCGCGATGTCGAGCGCGCTGGTGTTGAGGTCGG CCGAGCCGGGGTCGGAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Trehalose-Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Trehalose 6-Phosphatase; Glycosyl Hydrolase Protein; Glycosyl Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSVFGAILDRSAGHFRLGPYGVS VPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAF DYHRVGATWEYSANAYGEAIARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGERNWDYRYAWVRDSTFALWGL YTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGERSLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDS FYLHAKSREQVPETLWPVLKKQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTQEGLVLRYRVEETDDGLSGE EGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHLYAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEAD GSGMFQPANAPM
Sequences:
>Translated_652_residues MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSVFGAILDRSAGHFRLGPYGVS VPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAF DYHRVGATWEYSANAYGEAIARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGERNWDYRYAWVRDSTFALWGL YTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGERSLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDS FYLHAKSREQVPETLWPVLKKQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTQEGLVLRYRVEETDDGLSGE EGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHLYAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEAD GSGMFQPANAPM >Mature_652_residues MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSVFGAILDRSAGHFRLGPYGVS VPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLERRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAF DYHRVGATWEYSANAYGEAIARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGERNWDYRYAWVRDSTFALWGL YTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGERSLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDS FYLHAKSREQVPETLWPVLKKQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELTQEGLVLRYRVEETDDGLSGE EGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHLYAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEAD GSGMFQPANAPM
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73775; Mature: 73775
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCHH FGAILDRSAGHFRLGPYGVSVPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLE HHHHHHCCCCCEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCEEEEECHHHCCCCHHHH RRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRVGATWEYSANAYGEAI HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCHHHHHH ARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD HHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHH KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCEECCCCCEEEECCCCCCCCCCCC RNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGER CCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH SLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDSFYLHAKSREQVPETLWPVLK HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHH KQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHH AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELT HHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QEGLVLRYRVEETDDGLSGEEGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHL HCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEADGSGMFQPANAPM HHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MESSIDLRTPGPLAPNAALRNPFPPIADYAFLSDWETTCLISPAGSVEWMCVPRPDSPSV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCHH FGAILDRSAGHFRLGPYGVSVPSARRYLPGSLIMETTWQTHTGWLIVRDALVMGPWHDLE HHHHHHCCCCCEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCEEEEECHHHCCCCHHHH RRSRTHRRTPMDWDAEHILLRTVRCVSGTVELMMSCEPAFDYHRVGATWEYSANAYGEAI HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCHHHHHH ARATKQPDAHPTLRLTTNLRIGLEGREARARTRMKEGDDVFVALSWTKHPPPQTYQEAAD HHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHH KMWQTTECWRQWINIGNFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPETPQGE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCEECCCCCEEEECCCCCCCCCCCC RNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAFIADVSGANNNERHPLQVMYGVGGER CCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH SLVEEELHHLSGYDHARPVRIGNGAYDQVQHDIWGSILDSFYLHAKSREQVPETLWPVLK HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHH KQVEEAIKHWREPDRGIWEVRGEPQHFTSSKVMCWVALDRGAKLAERQGEKSYAQQWRNI HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHH AEEIKADILAHGVDSRGVFTQRYGSDALDASLLLVVLTRFLPPDDPRVRNTVLAIADELT HHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QEGLVLRYRVEETDDGLSGEEGTFTICSFWLVSALVEIGEVRRAKRLCERLLSYASPLHL HCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YAEEIEPRTGRQLGNFPQAFTHLALINAVVHVIRAEEEADGSGMFQPANAPM HHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA