| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cysT
Identifier: 41408310
GI number: 41408310
Start: 2459266
End: 2460138
Strand: Reverse
Name: cysT
Synonym: MAP2212c
Alternate gene names: 41408310
Gene position: 2460138-2459266 (Counterclockwise)
Preceding gene: 41408311
Following gene: 41408309
Centisome position: 50.94
GC content: 69.87
Gene sequence:
>873_bases ATGACGGCCATCACTCCCGACCCGCTGGCCATCCGGCCCGAACTCGGCGGCGACCCCGGACACCAGCCGGTGCCCGGACG CGGCCGCGGCACCACCGCGCTGCGGGTGGGGGTGGCCACGGTGTGGCTGTCGGTGATCGTGCTGCTGCCGCTGGCCGCCA TCGCCTGGCAGTCCGCCGGCGGCGGATGGCACGTGTTCTGGCTGGCGGTTACGTCGAACGCCGCGCTGGAATCGTTCCGG GTGACGCTGACGATCTCGGCCGGGGTGACCGTGCTCAACCTGGTCTTCGGCCTGGTGATCGCCTGGGTGCTGGTGCGCGA CGAGTTCCCCGGCAAGCGGCTGGTCGACGCGATCATCGACCTGCCGTTCGCGCTGCCCACCATCGTGGCCAGCCTGGTGA TGTTGGCGCTGTACGGCAACAACAGCCCGGTGGGTCTGCACCTGCAGCACACCGCGGCGGGTGTGGCGGTGGCGTTGGCC TTCGTCACGCTGCCGTTCGTGGTGCGTGCGGTCCAGCCGGTGCTGCTGGAGCTGGATCGCGAAACCGAGGAGGCGGCCGC GTCGCTGGGCGCCAGCGGCCCGAAGATCTTCACCTCCGTGGTGCTGCCCGCGTTGCTGCCCGCGTTGTTGTCCGGTGCGG GCCTGGCGTTTTCACGCGCGATCGGCGAGTTCGGCTCGGTGGTGCTGATCGGAGGTGCGGTGCCGGGCAAGACCGAAGTG TCCTCGCAGTGGATCCGGACCCTGATCGAGAACGACGACCGGACCGGCGCCGCCGCGATATCGATTGTGCTGTTGGCGAT TTCCTTTGTGGTGCTGCTGATCCTGCGGGTGGTCGGTGGGCGCGCGGCCAAGCGTGAGGAGCTGGCCGCATGA
Upstream 100 bases:
>100_bases TGTGGACCATCGCCGATCTGGGCGGCTGGAGCGCCGCGGACCCGCAGCTGTTCGACAAGAACACCGGCAGCATCACCAAG ATCTACACGCAGGCCACCGG
Downstream 100 bases:
>100_bases CGTCGTCGCCCGGGGTCCGCTATGGCCTGCGATTCGTGGCGCTGGCCTACATTTTCGTGCTGCTCGTCATTCCGGTGAGC CTGATCCTGTGGCGGACGTT
Product: CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTAITPDPLAIRPELGGDPGHQPVPGRGRGTTALRVGVATVWLSVIVLLPLAAIAWQSAGGGWHVFWLAVTSNAALESFR VTLTISAGVTVLNLVFGLVIAWVLVRDEFPGKRLVDAIIDLPFALPTIVASLVMLALYGNNSPVGLHLQHTAAGVAVALA FVTLPFVVRAVQPVLLELDRETEEAAASLGASGPKIFTSVVLPALLPALLSGAGLAFSRAIGEFGSVVLIGGAVPGKTEV SSQWIRTLIENDDRTGAAAISIVLLAISFVVLLILRVVGGRAAKREELAA
Sequences:
>Translated_290_residues MTAITPDPLAIRPELGGDPGHQPVPGRGRGTTALRVGVATVWLSVIVLLPLAAIAWQSAGGGWHVFWLAVTSNAALESFR VTLTISAGVTVLNLVFGLVIAWVLVRDEFPGKRLVDAIIDLPFALPTIVASLVMLALYGNNSPVGLHLQHTAAGVAVALA FVTLPFVVRAVQPVLLELDRETEEAAASLGASGPKIFTSVVLPALLPALLSGAGLAFSRAIGEFGSVVLIGGAVPGKTEV SSQWIRTLIENDDRTGAAAISIVLLAISFVVLLILRVVGGRAAKREELAA >Mature_289_residues TAITPDPLAIRPELGGDPGHQPVPGRGRGTTALRVGVATVWLSVIVLLPLAAIAWQSAGGGWHVFWLAVTSNAALESFRV TLTISAGVTVLNLVFGLVIAWVLVRDEFPGKRLVDAIIDLPFALPTIVASLVMLALYGNNSPVGLHLQHTAAGVAVALAF VTLPFVVRAVQPVLLELDRETEEAAASLGASGPKIFTSVVLPALLPALLSGAGLAFSRAIGEFGSVVLIGGAVPGKTEVS SQWIRTLIENDDRTGAAAISIVLLAISFVVLLILRVVGGRAAKREELAA
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=236, Percent_Identity=42.7966101694915, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI87082099, Length=265, Percent_Identity=33.2075471698113, Blast_Score=131, Evalue=6e-32, Organism=Escherichia coli, GI1786980, Length=203, Percent_Identity=33.4975369458128, Blast_Score=99, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30085; Mature: 29954
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAITPDPLAIRPELGGDPGHQPVPGRGRGTTALRVGVATVWLSVIVLLPLAAIAWQSAG CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGWHVFWLAVTSNAALESFRVTLTISAGVTVLNLVFGLVIAWVLVRDEFPGKRLVDAIID CCEEEEEEEEECCHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LPFALPTIVASLVMLALYGNNSPVGLHLQHTAAGVAVALAFVTLPFVVRAVQPVLLELDR CHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETEEAAASLGASGPKIFTSVVLPALLPALLSGAGLAFSRAIGEFGSVVLIGGAVPGKTEV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCHH SSQWIRTLIENDDRTGAAAISIVLLAISFVVLLILRVVGGRAAKREELAA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure TAITPDPLAIRPELGGDPGHQPVPGRGRGTTALRVGVATVWLSVIVLLPLAAIAWQSAG CCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGWHVFWLAVTSNAALESFRVTLTISAGVTVLNLVFGLVIAWVLVRDEFPGKRLVDAIID CCEEEEEEEEECCHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LPFALPTIVASLVMLALYGNNSPVGLHLQHTAAGVAVALAFVTLPFVVRAVQPVLLELDR CHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETEEAAASLGASGPKIFTSVVLPALLPALLSGAGLAFSRAIGEFGSVVLIGGAVPGKTEV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCHH SSQWIRTLIENDDRTGAAAISIVLLAISFVVLLILRVVGGRAAKREELAA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]