| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is nirA_2
Identifier: 41408306
GI number: 41408306
Start: 2454894
End: 2456561
Strand: Direct
Name: nirA_2
Synonym: MAP2208
Alternate gene names: 41408306
Gene position: 2454894-2456561 (Clockwise)
Preceding gene: 41408304
Following gene: 41408307
Centisome position: 50.83
GC content: 66.55
Gene sequence:
>1668_bases ATGACCACCGCCCGACCCGCGAAGGCCCGTAACGAGGGCCAGTGGGCACTGGGGAATCGTGAGCCGCTGAACCCGAACGA GGAAATGAAACAGGCCGGCGCCCCGCTGGCAGTTCGGGAGCGGATCGAGACCATCTACGCCAAGAACGGCTTCGACAGCA TCGACAAGAGCGACCTGCGCGGCCGTTTCCGCTGGTGGGGCCTGTACACCCAGCGCGAGCAGGGTTACGACGGCAGCTGG ACCGGCGACGAGAACATCGAAAAGCTCGAGGCCAGGTACTTCATGATGCGGGTGCGCTGCGACGGCGGCGCCATCTCCGC GGCCGCGCTGCGCACGCTGGGCCAGATTTCGGTGGACTTCGCCCGCGACACCGCCGACATCACCGACCGCGAGAACATCC AGTATCACTGGATCGAGGTGGAAAACGTCCCCGAGATCTGGCGCAGGCTCGACGCGGTGGGGTTGCGCACCACCGAGGCC TGCGGCGACTGCCCGCGGGTGATCCTGGGGTCGCCGCTGGCGGGTGAGTCGCTCGAGGAGGTCATCGACCCGAGCTGGGC GATCGCCGAGATCGCCCGTCGCTACATCGGCCAGCCCGACTTCGCCGACCTGCCCCGCAAGTACAAGACCGCGATCTCGG GGTTGCAGGACGTCGCCCACGAGGTCAACGACGTCGCGTTCATCGGGGTCAACCATCCCGAGCACGGTCCCGGCCTGGAC CTGTGGGTCGGCGGCGGGCTGTCGACCAACCCGATGCTGGCCCAACGGGTCGGCGCCTGGGTTCCGCTGCACGAGGTGCC CGAGGTGTGGGCGGCGGTCACCTCGGTGTTCCGCGACTACGGGTACCGCCGGCTGCGCTCCAAGGCGCGGCTGAAGTTCC TGGTCAAGGACTGGGGCATCGAGAAGTTCCGCGAAGTTCTCGAAACCGAATATCTCAAGCGTCCGCTGATCGACGGTCCG GCCCCCGAGCCGGTCGCGCATCCGATCGATCACGTGGGGGTGCAACGGCTCAAGAACGGGCTCAACGCGGTGGGAGTCGC CCCGATCGCCGGGCGGGTGTCGGGCACCATCCTGCTGGCGGTGGCCGACCTGGCGCAGCAAGCGGGTTGCGACCGGATCC GATTCACTCCCTATCAGAAGCTGGTGCTGCTCGACATCCCCGACGACAAGCTCGACGAGGTGGTGGCCGGGCTGGAAGCC CTCGGCCTGCAATCGCAACCGTCGCATTGGCGTCGTAACCTGATGGCCTGCAGCGGAATTGAGTTCTGCAAGCTGTCTTT CGCCGAAACACGGGTGCGGGCACAGGGTTTGGTGCCCGAGCTGGAGCGCCGCCTCGCCGATGTCAACCGGCAGCTCGACG TGCCGATTACCATCAACCTCAACGGCTGCCCCAACTCGTGTGCCCGCATCCAGGTCGCCGACATCGGCCTCAAAGGCCAG ATGGTCGACGACGGCGAGGGCGGCTCGGTCGAGGGATTCCAGGTGCATCTGGGCGGCAGCTTGGGCCAGGACAGCGGCTT CGGCCGAAAACTGCGCCAGCACAAGGTCACCAGCGACGAGCTCGGCGACTACATCGAGCGGGTGGCACGCAACTTCGTGA AATATCGCGGCGAAGGTGAACGTTTCGCCCAGTGGGCCATGAGGGCAGACGAGGACGATTTGCGATGA
Upstream 100 bases:
>100_bases GCCCCCCGCGTCTCCAGCCGGCTGACGGTTCCATGCCGCCCAACAGTGTCGGTGAACTGTGCTGGCCGCGCTGGCGATCT TTTTCCGAGGAGAACGTCCG
Downstream 100 bases:
>100_bases CCGAACGAACGACCAAACTTCCAGAGGCCGAACTGCGTGAACTAGCCGCCCGCGGCGCCGCCGAGCTCGAAGGCGCCAGC GCCAGCGACGTGTTGCGTTG
Product: NirA_2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MTTARPAKARNEGQWALGNREPLNPNEEMKQAGAPLAVRERIETIYAKNGFDSIDKSDLRGRFRWWGLYTQREQGYDGSW TGDENIEKLEARYFMMRVRCDGGAISAAALRTLGQISVDFARDTADITDRENIQYHWIEVENVPEIWRRLDAVGLRTTEA CGDCPRVILGSPLAGESLEEVIDPSWAIAEIARRYIGQPDFADLPRKYKTAISGLQDVAHEVNDVAFIGVNHPEHGPGLD LWVGGGLSTNPMLAQRVGAWVPLHEVPEVWAAVTSVFRDYGYRRLRSKARLKFLVKDWGIEKFREVLETEYLKRPLIDGP APEPVAHPIDHVGVQRLKNGLNAVGVAPIAGRVSGTILLAVADLAQQAGCDRIRFTPYQKLVLLDIPDDKLDEVVAGLEA LGLQSQPSHWRRNLMACSGIEFCKLSFAETRVRAQGLVPELERRLADVNRQLDVPITINLNGCPNSCARIQVADIGLKGQ MVDDGEGGSVEGFQVHLGGSLGQDSGFGRKLRQHKVTSDELGDYIERVARNFVKYRGEGERFAQWAMRADEDDLR
Sequences:
>Translated_555_residues MTTARPAKARNEGQWALGNREPLNPNEEMKQAGAPLAVRERIETIYAKNGFDSIDKSDLRGRFRWWGLYTQREQGYDGSW TGDENIEKLEARYFMMRVRCDGGAISAAALRTLGQISVDFARDTADITDRENIQYHWIEVENVPEIWRRLDAVGLRTTEA CGDCPRVILGSPLAGESLEEVIDPSWAIAEIARRYIGQPDFADLPRKYKTAISGLQDVAHEVNDVAFIGVNHPEHGPGLD LWVGGGLSTNPMLAQRVGAWVPLHEVPEVWAAVTSVFRDYGYRRLRSKARLKFLVKDWGIEKFREVLETEYLKRPLIDGP APEPVAHPIDHVGVQRLKNGLNAVGVAPIAGRVSGTILLAVADLAQQAGCDRIRFTPYQKLVLLDIPDDKLDEVVAGLEA LGLQSQPSHWRRNLMACSGIEFCKLSFAETRVRAQGLVPELERRLADVNRQLDVPITINLNGCPNSCARIQVADIGLKGQ MVDDGEGGSVEGFQVHLGGSLGQDSGFGRKLRQHKVTSDELGDYIERVARNFVKYRGEGERFAQWAMRADEDDLR >Mature_554_residues TTARPAKARNEGQWALGNREPLNPNEEMKQAGAPLAVRERIETIYAKNGFDSIDKSDLRGRFRWWGLYTQREQGYDGSWT GDENIEKLEARYFMMRVRCDGGAISAAALRTLGQISVDFARDTADITDRENIQYHWIEVENVPEIWRRLDAVGLRTTEAC GDCPRVILGSPLAGESLEEVIDPSWAIAEIARRYIGQPDFADLPRKYKTAISGLQDVAHEVNDVAFIGVNHPEHGPGLDL WVGGGLSTNPMLAQRVGAWVPLHEVPEVWAAVTSVFRDYGYRRLRSKARLKFLVKDWGIEKFREVLETEYLKRPLIDGPA PEPVAHPIDHVGVQRLKNGLNAVGVAPIAGRVSGTILLAVADLAQQAGCDRIRFTPYQKLVLLDIPDDKLDEVVAGLEAL GLQSQPSHWRRNLMACSGIEFCKLSFAETRVRAQGLVPELERRLADVNRQLDVPITINLNGCPNSCARIQVADIGLKGQM VDDGEGGSVEGFQVHLGGSLGQDSGFGRKLRQHKVTSDELGDYIERVARNFVKYRGEGERFAQWAMRADEDDLR
Specific function: This Enzyme Catalyzes The 6-Electron Reduction Of Sulfite To Sulfide. This Is One Of Several Activities Required For The Biosynthesis Of L-Cysteine From Sulfate. [C]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Homologues:
Organism=Escherichia coli, GI1789122, Length=536, Percent_Identity=24.2537313432836, Blast_Score=113, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6322597, Length=563, Percent_Identity=25.7548845470693, Blast_Score=129, Evalue=1e-30,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): SIR2_MYCPA (Q73XV0)
Other databases:
- EMBL: AE016958 - RefSeq: NP_961142.1 - ProteinModelPortal: Q73XV0 - SMR: Q73XV0 - EnsemblBacteria: EBMYCT00000037265 - GeneID: 2718803 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP2208 - NMPDR: fig|262316.1.peg.2208 - GeneTree: EBGT00050000015728 - HOGENOM: HBG578916 - OMA: DQLERWQ - ProtClustDB: CLSK872057 - BRENDA: 1.8.7.1 - InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 - PRINTS: PR00397
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr; SSF55124 NiR_SiRalpha_1/3
EC number: =1.8.7.1
Molecular weight: Translated: 61869; Mature: 61738
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARPAKARNEGQWALGNREPLNPNEEMKQAGAPLAVRERIETIYAKNGFDSIDKSDLR CCCCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHC GRFRWWGLYTQREQGYDGSWTGDENIEKLEARYFMMRVRCDGGAISAAALRTLGQISVDF CCEEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHH ARDTADITDRENIQYHWIEVENVPEIWRRLDAVGLRTTEACGDCPRVILGSPLAGESLEE HCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCCHHHHH VIDPSWAIAEIARRYIGQPDFADLPRKYKTAISGLQDVAHEVNDVAFIGVNHPEHGPGLD HHCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCE LWVGGGLSTNPMLAQRVGAWVPLHEVPEVWAAVTSVFRDYGYRRLRSKARLKFLVKDWGI EEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EKFREVLETEYLKRPLIDGPAPEPVAHPIDHVGVQRLKNGLNAVGVAPIAGRVSGTILLA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH VADLAQQAGCDRIRFTPYQKLVLLDIPDDKLDEVVAGLEALGLQSQPSHWRRNLMACSGI HHHHHHHCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC EFCKLSFAETRVRAQGLVPELERRLADVNRQLDVPITINLNGCPNSCARIQVADIGLKGQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCE MVDDGEGGSVEGFQVHLGGSLGQDSGFGRKLRQHKVTSDELGDYIERVARNFVKYRGEGE EEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH RFAQWAMRADEDDLR HHHHHHHCCCCCCCC >Mature Secondary Structure TTARPAKARNEGQWALGNREPLNPNEEMKQAGAPLAVRERIETIYAKNGFDSIDKSDLR CCCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHC GRFRWWGLYTQREQGYDGSWTGDENIEKLEARYFMMRVRCDGGAISAAALRTLGQISVDF CCEEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHH ARDTADITDRENIQYHWIEVENVPEIWRRLDAVGLRTTEACGDCPRVILGSPLAGESLEE HCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCCHHHHH VIDPSWAIAEIARRYIGQPDFADLPRKYKTAISGLQDVAHEVNDVAFIGVNHPEHGPGLD HHCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCE LWVGGGLSTNPMLAQRVGAWVPLHEVPEVWAAVTSVFRDYGYRRLRSKARLKFLVKDWGI EEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EKFREVLETEYLKRPLIDGPAPEPVAHPIDHVGVQRLKNGLNAVGVAPIAGRVSGTILLA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH VADLAQQAGCDRIRFTPYQKLVLLDIPDDKLDEVVAGLEALGLQSQPSHWRRNLMACSGI HHHHHHHCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC EFCKLSFAETRVRAQGLVPELERRLADVNRQLDVPITINLNGCPNSCARIQVADIGLKGQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCE MVDDGEGGSVEGFQVHLGGSLGQDSGFGRKLRQHKVTSDELGDYIERVARNFVKYRGEGE EEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH RFAQWAMRADEDDLR HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA