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The map label for this gene is desA1 [H]

Identifier: 41408300

GI number: 41408300

Start: 2447656

End: 2448204

Strand: Reverse

Name: desA1 [H]

Synonym: MAP2202c

Alternate gene names: 41408300

Gene position: 2448204-2447656 (Counterclockwise)

Preceding gene: 41408301

Following gene: 41408286

Centisome position: 50.69

GC content: 58.83

Gene sequence:

>549_bases
TTGACAACGTCATTGAGAATCTCATTCCAGGAATTGGCCACCCGCGTCTCGCACCGCAACACCGGCAAAGTGTGCAACGA
CGCGATCGCCGAGCAGTTGATGGCCAGGGTGTCGCACGACGAAAACCTGCACATGATCTTCTACCGGGACGTCAGCGCCG
CGGGCCTGGATATCGCACCGAATCAAGCGATGAAGTCGGTGCACCGGATTCTGCGCAATTTCAAGATGCCCGGATTCACG
GTGCCGGAGTTTCGGCGCAAGGCGGTGATCATCGCCGTCGGCGGTGTGTATGACCCACGGATCCATCTCGACGAGGTGGT
CATGCCGGTGCTCAAGAAATGGCGCATCTTCGAACGCGAAGACTTTACCGGCGAGGCCGCCCGAATGCGCGACGATCTCG
GCCTGCTGGTCAAGGAGCTGCAGGATGCGTCGGAGAAATTCGAGGAATCCAAGCAGCGCTACCTCGAACGTGAGGCACGC
AGGACCGAGAAAATCACCGCCAGCAAAGTGTTGCAAACGAAAGGAACGCTGACGCTGAGCCGGCATTGA

Upstream 100 bases:

>100_bases
CCCAAGCCGTCCTCGCCCTGGCCCGCCGCCGCCTCAACGTCCTGTGGGCCATGCTGCGCGACCACGCTGTCTACCACCCC
GCAACCACTACCGCGGCGGC

Downstream 100 bases:

>100_bases
GCCGAGTGTTCCGCCGATGATTGTCGCCGCCGGGCCGATGTCACGCGCAACCCTGCACGCCTGCTGCGGGTTTGCCGCGA
AAATCCATCATTCTCCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: DES; Putative acyl-ACP desaturase desA1 [H]

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MTTSLRISFQELATRVSHRNTGKVCNDAIAEQLMARVSHDENLHMIFYRDVSAAGLDIAPNQAMKSVHRILRNFKMPGFT
VPEFRRKAVIIAVGGVYDPRIHLDEVVMPVLKKWRIFEREDFTGEAARMRDDLGLLVKELQDASEKFEESKQRYLEREAR
RTEKITASKVLQTKGTLTLSRH

Sequences:

>Translated_182_residues
MTTSLRISFQELATRVSHRNTGKVCNDAIAEQLMARVSHDENLHMIFYRDVSAAGLDIAPNQAMKSVHRILRNFKMPGFT
VPEFRRKAVIIAVGGVYDPRIHLDEVVMPVLKKWRIFEREDFTGEAARMRDDLGLLVKELQDASEKFEESKQRYLEREAR
RTEKITASKVLQTKGTLTLSRH
>Mature_181_residues
TTSLRISFQELATRVSHRNTGKVCNDAIAEQLMARVSHDENLHMIFYRDVSAAGLDIAPNQAMKSVHRILRNFKMPGFTV
PEFRRKAVIIAVGGVYDPRIHLDEVVMPVLKKWRIFEREDFTGEAARMRDDLGLLVKELQDASEKFEESKQRYLEREARR
TEKITASKVLQTKGTLTLSRH

Specific function: Could be involved in mycobacterial fatty acid biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005067
- InterPro:   IPR009078
- InterPro:   IPR012348 [H]

Pfam domain/function: PF03405 FA_desaturase_2 [H]

EC number: NA

Molecular weight: Translated: 20970; Mature: 20838

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSLRISFQELATRVSHRNTGKVCNDAIAEQLMARVSHDENLHMIFYRDVSAAGLDIAP
CCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC
NQAMKSVHRILRNFKMPGFTVPEFRRKAVIIAVGGVYDPRIHLDEVVMPVLKKWRIFERE
HHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
DFTGEAARMRDDLGLLVKELQDASEKFEESKQRYLEREARRTEKITASKVLQTKGTLTLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
RH
CC
>Mature Secondary Structure 
TTSLRISFQELATRVSHRNTGKVCNDAIAEQLMARVSHDENLHMIFYRDVSAAGLDIAP
CCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC
NQAMKSVHRILRNFKMPGFTVPEFRRKAVIIAVGGVYDPRIHLDEVVMPVLKKWRIFERE
HHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
DFTGEAARMRDDLGLLVKELQDASEKFEESKQRYLEREARRTEKITASKVLQTKGTLTLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
RH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12368430; 12218036 [H]