| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is lipK
Identifier: 41408295
GI number: 41408295
Start: 2442083
End: 2443087
Strand: Direct
Name: lipK
Synonym: MAP2197
Alternate gene names: 41408295
Gene position: 2442083-2443087 (Clockwise)
Preceding gene: 41408294
Following gene: 41408296
Centisome position: 50.56
GC content: 68.36
Gene sequence:
>1005_bases ATGACGGGCGGTGTTCCGGCTCGCGGGTCATTGCGGTCCCGCGGCGCGGCAGCGGTAAGTACGTACACCCTTCGGCCGAT CACCAGCGTGATCCCGCCCGAGCGGGCATGGGGACTGTGGCTTTCGCGCCAGATCGTCGCCCGGATCATGGGAACGTTCG GCCCCTCGCTGTCCGGCACCCGCGTCCAATCGGTGGACACCAGGCTGCCCGACGGCCGCCGCGTCAAGGGTGAATGGGTC TTCGGCCCGCGCACCCCGACGAGCGAGCACTCGCGCCCGTCCAGCATCGCCGAAGCGATCTACTACATACACGGCAGCGG CTACGCGGTGTGTTCGCCAAAGACGCACCGCCGCTTGACATCCTGGCTGTCGTCGCTGACCGGCCTGCCGGTGTTCTGCG TGGACTACCGACTGGCCCCGCGTCATCGCTTCCCCACCGCTGCCGACGACGTGCGCGCCGGCTGGGACTGGCTGATCAAC ACCTGCGGTGTGTTGCCCGAACAGATGGTGATCGCCGGTGACTCGGCCGGCGGTCACCTGTCCGTCGACCTACTGCTGCA ACCGGGGGTCGAACACCCCGCCGCCATGGTGTTGTTCTCCCCCCTCTATGACCTGACGTTCGAGCTGGCCAAGGCGCGAG AACGGATTCGCCCCGATCCGACCACCCGGGCGGCCAACGCGATCCGGCTGGTGGGCCTCTACCACAGCGGCGTCGACCTC ACCCATGAGCGGCTGACGCTCGACGTCGCCCGCGGTCCCGCGCTTCCGCCCACATTGATCCAGGCCGGCGGAGCCGAAAT GCTGCAAGCGGACGCCCACCAACTCGCCGCCGACATCCGCACCGCCGGCGGCAGATGCGAACTACAGATCTGGCCGCACC AGGTGCACGTCTTTCAGGCGTTGCCGCGCATGACGCCCGAAGCCGCCAAGGCCATGGCCTATGTCGCGCGGTTCATCACC CACGCCCTGCAGGATGCCCGTGCCCTCACCCAGGAGATGCACTGA
Upstream 100 bases:
>100_bases GACTCCCAACACTGCATTCGCTCCCACCAAGCACCACGCGTACGGCGCAGACCAAAAGCTGCCATTGACCAATGTCACCA TTTAGTGTTGACTGCATTGC
Downstream 100 bases:
>100_bases CATGTTGGACCGGCTGCTGCACCGATCGAAGACCAGCCGCGGCGCCCTGGCGGTGGTGACCGGCGCGGGAAGCGGCATCG GTGCGGCCTTCGCCCTCGAA
Product: LipK
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTGGVPARGSLRSRGAAAVSTYTLRPITSVIPPERAWGLWLSRQIVARIMGTFGPSLSGTRVQSVDTRLPDGRRVKGEWV FGPRTPTSEHSRPSSIAEAIYYIHGSGYAVCSPKTHRRLTSWLSSLTGLPVFCVDYRLAPRHRFPTAADDVRAGWDWLIN TCGVLPEQMVIAGDSAGGHLSVDLLLQPGVEHPAAMVLFSPLYDLTFELAKARERIRPDPTTRAANAIRLVGLYHSGVDL THERLTLDVARGPALPPTLIQAGGAEMLQADAHQLAADIRTAGGRCELQIWPHQVHVFQALPRMTPEAAKAMAYVARFIT HALQDARALTQEMH
Sequences:
>Translated_334_residues MTGGVPARGSLRSRGAAAVSTYTLRPITSVIPPERAWGLWLSRQIVARIMGTFGPSLSGTRVQSVDTRLPDGRRVKGEWV FGPRTPTSEHSRPSSIAEAIYYIHGSGYAVCSPKTHRRLTSWLSSLTGLPVFCVDYRLAPRHRFPTAADDVRAGWDWLIN TCGVLPEQMVIAGDSAGGHLSVDLLLQPGVEHPAAMVLFSPLYDLTFELAKARERIRPDPTTRAANAIRLVGLYHSGVDL THERLTLDVARGPALPPTLIQAGGAEMLQADAHQLAADIRTAGGRCELQIWPHQVHVFQALPRMTPEAAKAMAYVARFIT HALQDARALTQEMH >Mature_333_residues TGGVPARGSLRSRGAAAVSTYTLRPITSVIPPERAWGLWLSRQIVARIMGTFGPSLSGTRVQSVDTRLPDGRRVKGEWVF GPRTPTSEHSRPSSIAEAIYYIHGSGYAVCSPKTHRRLTSWLSSLTGLPVFCVDYRLAPRHRFPTAADDVRAGWDWLINT CGVLPEQMVIAGDSAGGHLSVDLLLQPGVEHPAAMVLFSPLYDLTFELAKARERIRPDPTTRAANAIRLVGLYHSGVDLT HERLTLDVARGPALPPTLIQAGGAEMLQADAHQLAADIRTAGGRCELQIWPHQVHVFQALPRMTPEAAKAMAYVARFITH ALQDARALTQEMH
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential). Note=External to the cytoplasmic membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Caenorhabditis elegans, GI115533410, Length=142, Percent_Identity=31.6901408450704, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533412, Length=142, Percent_Identity=31.6901408450704, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 36466; Mature: 36335
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGVPARGSLRSRGAAAVSTYTLRPITSVIPPERAWGLWLSRQIVARIMGTFGPSLSGT CCCCCCCCCCHHHCCCHHHEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC RVQSVDTRLPDGRRVKGEWVFGPRTPTSEHSRPSSIAEAIYYIHGSGYAVCSPKTHRRLT EEEHHHCCCCCCCEECCEEEECCCCCCCCCCCHHHHHHHEEEEECCCEEEECCHHHHHHH SWLSSLTGLPVFCVDYRLAPRHRFPTAADDVRAGWDWLINTCGVLPEQMVIAGDSAGGHL HHHHHHCCCCEEEEECEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEE SVDLLLQPGVEHPAAMVLFSPLYDLTFELAKARERIRPDPTTRAANAIRLVGLYHSGVDL EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECCCCC THERLTLDVARGPALPPTLIQAGGAEMLQADAHQLAADIRTAGGRCELQIWPHQVHVFQA CHHHEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH LPRMTPEAAKAMAYVARFITHALQDARALTQEMH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGGVPARGSLRSRGAAAVSTYTLRPITSVIPPERAWGLWLSRQIVARIMGTFGPSLSGT CCCCCCCCCHHHCCCHHHEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC RVQSVDTRLPDGRRVKGEWVFGPRTPTSEHSRPSSIAEAIYYIHGSGYAVCSPKTHRRLT EEEHHHCCCCCCCEECCEEEECCCCCCCCCCCHHHHHHHEEEEECCCEEEECCHHHHHHH SWLSSLTGLPVFCVDYRLAPRHRFPTAADDVRAGWDWLINTCGVLPEQMVIAGDSAGGHL HHHHHHCCCCEEEEECEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEE SVDLLLQPGVEHPAAMVLFSPLYDLTFELAKARERIRPDPTTRAANAIRLVGLYHSGVDL EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECCCCC THERLTLDVARGPALPPTLIQAGGAEMLQADAHQLAADIRTAGGRCELQIWPHQVHVFQA CHHHEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH LPRMTPEAAKAMAYVARFITHALQDARALTQEMH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2545531 [H]