| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is dhbF [H]
Identifier: 41408270
GI number: 41408270
Start: 2406269
End: 2407534
Strand: Reverse
Name: dhbF [H]
Synonym: MAP2172c
Alternate gene names: 41408270
Gene position: 2407534-2406269 (Counterclockwise)
Preceding gene: 41408271
Following gene: 41408269
Centisome position: 49.85
GC content: 71.41
Gene sequence:
>1266_bases ATGATCCTGGCCGACGACGCCGAACACCGCGACCCCGAGGCGCTCGGGGAGTTGATGCACCGGCATTCGGTCGCCCAGGT GACCGCGGTGCCCAGCCTGGTCTCCGCGCTGCTGGACAGCCGGCCCGATGCGGTGCGCTCGCTGTCGCGGCTGGTGTGCG GCGGCGAGCCGGTCAGCACCTCGCTGCTGCAGCGGCTGGTGTCGGTGTGCGACGAAGCCGACGGCGGCGGCCCCGAGCTG TTGAACAACATCGGCTCGACCGAAACCTCCGGCGCGGTGTCCCGCGGGCCGTTGAGTCCGCCGAATCCGCTTGTCGGGAA ACCCGTTCCGGGTGCGCAGGCGTATCTGCTCGACGACGGGCTGCGCCCGGTGCCGGTCGGCGTGGTGGGGGAGCTCTACT ACGCCGGCGACCAGCTCGCTCGGGGGTATTGGAAACGTCCCGGCCTGACCGCGGCCCGGTTCGTCGCGAATCCGTTCGGG GCGGAACCCGGTTCGCGCCTGTACCGCAGCGGCGACCTGGCCCGGTGGACCGAGGACGGCCAGCTGGAATTCGTCGGGCG CTCCGACCACCAGGTGCAGGTCCGTGGTTTCCGCGTCGAGTTGGCCGAGGTCGAGGCGGCTCTGGCGGGCGCCGATGGCG TCGCCGCGGCGGCGGCCCGCACCTGGGAGGTGCACGGCGGCACCTCCCTGGCCGGCTACGTGGTGCCGCAACGGCCCATT GCCGACGAGGCCGAGAAGGCGGCGTTCGCCGCACAGGTGCGCGCCGAGATCGCTGCCACCTTGCCGGGTTACATGATGCC GTCGTCGCTGACCGTGCTCGACGCCCTGCCGAAAACCGAATCCGGCAAGCTGAATCGGCCCGGCCTGCCCCGGCCGGTGG TCAGCACCGGCGGCCGGACCGAGCCGACCCGCACCGACACCGAACGGGCATTGGCCAACGTGTTCGCCGAGCTGCTGTCC ACACCCGAGGTCGGGCGGTTCGACGACTTCTTCGCGCTGGGCGGCGACAGCATCCTGTCGGTGCAGCTGGCGTCGCGGGC GCGGGCAGCCGGCCTGCCGGTGAGTCCGCGGATGATCTTCGAGAACCCCACCGTGCAGCAGCTGGCTGCCGCCCTGGATG CGTTGGGAGACAACGATAGTGACGGTCGGCTGGACGATCAGCCGGCCGACGCCCGGTTCGAGCCGATGAGCACCTCAGGG TTGTCGGCCTCGGATCTGGCCGCGGTGACCCAGCTTTGGTCGTCGTCGCGGGAAGGCACCGCATGA
Upstream 100 bases:
>100_bases CTACCCGCCGCGCACCGACGACGTTCGATTGGCGCAGGCCTCCATCACCTTCCTGGAAGGCGGCATGGAGATGCTGGCCG GGCTGGCGGCGGGCGCGACG
Downstream 100 bases:
>100_bases CCGCCGCCGAAACCGATGTCGCCCCCGACATCGAGGACGTGATGGCGCTGAGCCCGCTGCAGGAGGGCTTGTATTCGCTG ACCACGCTTGCCGAGTTCGC
Product: hypothetical protein
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MILADDAEHRDPEALGELMHRHSVAQVTAVPSLVSALLDSRPDAVRSLSRLVCGGEPVSTSLLQRLVSVCDEADGGGPEL LNNIGSTETSGAVSRGPLSPPNPLVGKPVPGAQAYLLDDGLRPVPVGVVGELYYAGDQLARGYWKRPGLTAARFVANPFG AEPGSRLYRSGDLARWTEDGQLEFVGRSDHQVQVRGFRVELAEVEAALAGADGVAAAAARTWEVHGGTSLAGYVVPQRPI ADEAEKAAFAAQVRAEIAATLPGYMMPSSLTVLDALPKTESGKLNRPGLPRPVVSTGGRTEPTRTDTERALANVFAELLS TPEVGRFDDFFALGGDSILSVQLASRARAAGLPVSPRMIFENPTVQQLAAALDALGDNDSDGRLDDQPADARFEPMSTSG LSASDLAAVTQLWSSSREGTA
Sequences:
>Translated_421_residues MILADDAEHRDPEALGELMHRHSVAQVTAVPSLVSALLDSRPDAVRSLSRLVCGGEPVSTSLLQRLVSVCDEADGGGPEL LNNIGSTETSGAVSRGPLSPPNPLVGKPVPGAQAYLLDDGLRPVPVGVVGELYYAGDQLARGYWKRPGLTAARFVANPFG AEPGSRLYRSGDLARWTEDGQLEFVGRSDHQVQVRGFRVELAEVEAALAGADGVAAAAARTWEVHGGTSLAGYVVPQRPI ADEAEKAAFAAQVRAEIAATLPGYMMPSSLTVLDALPKTESGKLNRPGLPRPVVSTGGRTEPTRTDTERALANVFAELLS TPEVGRFDDFFALGGDSILSVQLASRARAAGLPVSPRMIFENPTVQQLAAALDALGDNDSDGRLDDQPADARFEPMSTSG LSASDLAAVTQLWSSSREGTA >Mature_421_residues MILADDAEHRDPEALGELMHRHSVAQVTAVPSLVSALLDSRPDAVRSLSRLVCGGEPVSTSLLQRLVSVCDEADGGGPEL LNNIGSTETSGAVSRGPLSPPNPLVGKPVPGAQAYLLDDGLRPVPVGVVGELYYAGDQLARGYWKRPGLTAARFVANPFG AEPGSRLYRSGDLARWTEDGQLEFVGRSDHQVQVRGFRVELAEVEAALAGADGVAAAAARTWEVHGGTSLAGYVVPQRPI ADEAEKAAFAAQVRAEIAATLPGYMMPSSLTVLDALPKTESGKLNRPGLPRPVVSTGGRTEPTRTDTERALANVFAELLS TPEVGRFDDFFALGGDSILSVQLASRARAAGLPVSPRMIFENPTVQQLAAALDALGDNDSDGRLDDQPADARFEPMSTSG LSASDLAAVTQLWSSSREGTA
Specific function: Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Escherichia coli, GI1786801, Length=409, Percent_Identity=33.9853300733496, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI1788107, Length=283, Percent_Identity=29.6819787985866, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI145693145, Length=288, Percent_Identity=28.125, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786810, Length=285, Percent_Identity=28.4210526315789, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17556356, Length=340, Percent_Identity=27.9411764705882, Blast_Score=102, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6319591, Length=366, Percent_Identity=27.0491803278689, Blast_Score=106, Evalue=6e-24, Organism=Drosophila melanogaster, GI24648676, Length=415, Percent_Identity=27.2289156626506, Blast_Score=125, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 44180; Mature: 44180
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILADDAEHRDPEALGELMHRHSVAQVTAVPSLVSALLDSRPDAVRSLSRLVCGGEPVST CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHH SLLQRLVSVCDEADGGGPELLNNIGSTETSGAVSRGPLSPPNPLVGKPVPGAQAYLLDDG HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LRPVPVGVVGELYYAGDQLARGYWKRPGLTAARFVANPFGAEPGSRLYRSGDLARWTEDG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCEECCCC QLEFVGRSDHQVQVRGFRVELAEVEAALAGADGVAAAAARTWEVHGGTSLAGYVVPQRPI CEEEECCCCCEEEEEEEEEEHHHHHHHHHCCCCHHHHHHHEEEECCCCCEEEEECCCCCC ADEAEKAAFAAQVRAEIAATLPGYMMPSSLTVLDALPKTESGKLNRPGLPRPVVSTGGRT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCC EPTRTDTERALANVFAELLSTPEVGRFDDFFALGGDSILSVQLASRARAAGLPVSPRMIF CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEHHHHHHHHCCCCCCCEEEE ENPTVQQLAAALDALGDNDSDGRLDDQPADARFEPMSTSGLSASDLAAVTQLWSSSREGT CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC A C >Mature Secondary Structure MILADDAEHRDPEALGELMHRHSVAQVTAVPSLVSALLDSRPDAVRSLSRLVCGGEPVST CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHH SLLQRLVSVCDEADGGGPELLNNIGSTETSGAVSRGPLSPPNPLVGKPVPGAQAYLLDDG HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LRPVPVGVVGELYYAGDQLARGYWKRPGLTAARFVANPFGAEPGSRLYRSGDLARWTEDG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCEECCCC QLEFVGRSDHQVQVRGFRVELAEVEAALAGADGVAAAAARTWEVHGGTSLAGYVVPQRPI CEEEECCCCCEEEEEEEEEEHHHHHHHHHCCCCHHHHHHHEEEECCCCCEEEEECCCCCC ADEAEKAAFAAQVRAEIAATLPGYMMPSSLTVLDALPKTESGKLNRPGLPRPVVSTGGRT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCC EPTRTDTERALANVFAELLSTPEVGRFDDFFALGGDSILSVQLASRARAAGLPVSPRMIF CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEHHHHHHHHCCCCCCCEEEE ENPTVQQLAAALDALGDNDSDGRLDDQPADARFEPMSTSGLSASDLAAVTQLWSSSREGT CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11112781; 9384377; 10568751; 8550523 [H]