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The map label for this gene is recO

Identifier: 41408240

GI number: 41408240

Start: 2371428

End: 2372225

Strand: Reverse

Name: recO

Synonym: MAP2142c

Alternate gene names: 41408240

Gene position: 2372225-2371428 (Counterclockwise)

Preceding gene: 41408243

Following gene: 41408239

Centisome position: 49.12

GC content: 70.68

Gene sequence:

>798_bases
ATGCGGCTGTATCGAGACCGAGCTGTTGTGCTGCGCCAGCACAAGCTCGGCGAAGCCGACCGGATCGTCACCCTGTTGAC
CCGGGACCACGGGCTGGTTCGCGCGGTGGCCAAGGGGGTACGCCGCACCCGCAGCAAATTCGGCGCGCGGCTGGAGCCGT
TCGCCCATATCGACGCGCAGTTGCATCCGGGCCGCAACCTCGACATCGTCACCCAGGTCGTCTCGATCGACGCGTTCGCC
ACCGACATCGTCAGCGATTACGGCCGCTACACCTGCGCGTGCGCGATGCTGGAAACCGCCGAACGCCTCGCCGGTGAGGA
GCGCGCCCCCGCCCCGGCCCTGCACGGGCTCACGGTGAGCGCGTTGCGGGCGGTGGCCGACGGCCGCCGGTCCCGGGACC
TGCTGCTGGACGCCTACCTGTTGCGCGCGATGGGCATCGCCGGATGGGCACCGGCGCTGACCGAGTGCGCCCGCTGCGCC
ACCCCCGGCCCGCATCGGGCGTTCCACGTCGGCGCCGGCGGCAGCGTGTGCCCGCACTGCCGCCCGGCCGGTTCGACGAC
ACCGCCTCCCGGCGTGCTGGACCTGATGTCGGCGTTGCACGACGGCGACTGGGAGTTCGCCGAGCAGACGCCGCAATCGC
ACCGCAACTACGTCAGCGGCCTGGTGGCCGCGCACCTGCAATGGCATCTGGAGCGCCAGCTCAAGACGTTGCCGCTCGTC
GAGCGGACCTATCACATCGACCGCACCATCGCCGACCAGCGCGCCACGCTGATCGGGCAGGATATGGACTGTGGTTAG

Upstream 100 bases:

>100_bases
GGAAAGCGCCCCGGGACCCGACTCAGAAGCGCCAATCACGGGGTACGAGACTAACGGCGCGGATCCCCGCAATGTCGCGG
CGGGGTGCAAAACTATTGGG

Downstream 100 bases:

>100_bases
AGCCGAGCGCGCCCCGACGTCGACCGGCTTTCCGCAGCTGCCCCCGGCGCCCGACGACTACCCGGTGTTCCCGGACAAGT
CGACGTGGCCGGTGGTCTTC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHPGRNLDIVTQVVSIDAFA
TDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVSALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHVGAGGSVCPHCRPAGSTTPPPGVLDLMSALHDGDWEFAEQTPQSHRNYVSGLVAAHLQWHLERQLKTLPLV
ERTYHIDRTIADQRATLIGQDMDCG

Sequences:

>Translated_265_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHPGRNLDIVTQVVSIDAFA
TDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVSALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHVGAGGSVCPHCRPAGSTTPPPGVLDLMSALHDGDWEFAEQTPQSHRNYVSGLVAAHLQWHLERQLKTLPLV
ERTYHIDRTIADQRATLIGQDMDCG
>Mature_265_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHPGRNLDIVTQVVSIDAFA
TDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVSALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHVGAGGSVCPHCRPAGSTTPPPGVLDLMSALHDGDWEFAEQTPQSHRNYVSGLVAAHLQWHLERQLKTLPLV
ERTYHIDRTIADQRATLIGQDMDCG

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_MYCPA (Q73Y16)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_961076.1
- ProteinModelPortal:   Q73Y16
- SMR:   Q73Y16
- EnsemblBacteria:   EBMYCT00000037494
- GeneID:   2721556
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP2142c
- NMPDR:   fig|262316.1.peg.2142
- GeneTree:   EBGT00050000016913
- HOGENOM:   HBG634481
- OMA:   WHLERGL
- ProtClustDB:   PRK00085
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 29045; Mature: 29045

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ
CCCCHHHHHHHHHHCCCCHHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
LHPGRNLDIVTQVVSIDAFATDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCPHC
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
RPAGSTTPPPGVLDLMSALHDGDWEFAEQTPQSHRNYVSGLVAAHLQWHLERQLKTLPLV
CCCCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ERTYHIDRTIADQRATLIGQDMDCG
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ
CCCCHHHHHHHHHHCCCCHHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
LHPGRNLDIVTQVVSIDAFATDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCPHC
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
RPAGSTTPPPGVLDLMSALHDGDWEFAEQTPQSHRNYVSGLVAAHLQWHLERQLKTLPLV
CCCCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ERTYHIDRTIADQRATLIGQDMDCG
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA