Click here to switch to the map view.

The map label for this gene is tldD [C]

Identifier: 41408187

GI number: 41408187

Start: 2309548

End: 2311065

Strand: Reverse

Name: tldD [C]

Synonym: MAP2089c

Alternate gene names: 41408187

Gene position: 2311065-2309548 (Counterclockwise)

Preceding gene: 41408191

Following gene: 41408186

Centisome position: 47.85

GC content: 69.1

Gene sequence:

>1518_bases
GTGACACCGAACCGGGGGATCGATGCCGACTTCCTGGACCTGCCGCGCCACGAACTGGCCGACGCGGCGCTGTCCGCGGC
CACCGCGGCCGGGGCCAGCCATGCCGACCTGCGGGTTCACCGGCTCATCACCGAGATCATCCAGCTGCGCGACGGCGAGC
TGGAAACCGCGGTGATCAATCGCGAGGTCGGGTTGGCGGTGCGGGTGATCGTCGACGGCACCTGGGGATTCGCGTCGCAC
GCGGAGTTGGCGCCGTCGGTGGCCGCCGAGACCGCCCGCCGCGCCGTGCACGTGGCCACCACGCTGGCCACGCTGAGCAG
CGAGCGGGTCGAGCTGGCGCCCGAACCCGTCTACCGGGACGCCACGTGGGTGTCGAGCTACCGGATCGACCCGTTCGACG
TCTCGGCCGCCGACAAGATCGGCGTGCTGGGCGACTACTCGGGGCGGCTGCTCGCCGCCGACGGCATCGATCACGTGTCG
GCGCTGCTGACCGCCGTCAAGGAGCAGACGTTCTACGCCGACACGTTCGGCTCGTCGATCACCCAGCAGCGGGTGCGGGT
GCTGCCCTCGCTGGAAGCGGTGACGGTGGACGCCCAGGCGGGCAGCTTCGACTCGATGCGGACGTTGGCGCCGCCGATGG
GTCGCGGCTGGGAGGCCCTGGCCGGTGACGAGGTGTGGAATTGGACCGACGAGCTGGCGCAGCTGCCGTCCCTGCTGGCC
GAGAAGGTCAAGGCACCCACAGTGGCTCCCGGGCCCACCGACCTGGTGATCGACCCGACCAACCTCTGGCTGACCATTCA
TGAATCGATCGGGCACGCAACCGAATACGACCGCGCCATCGGCTACGAGGCCGCCTACGCCGGCACGTCGTTCGCCACAC
CGGACAAGCTGGGCGCCATGCGGTACGGGTCGCCGGTGATGAACGTGACCGCGGACCGGACCGTCGAATTCGGTTTGGCC
ACCATCGGTTACGACGATGAGGGGGTGGCCGCGCAAAGCTGGGATCTGGTGCGCGACGGGATTTTCACCGGTTATCAGCT
GGACCGGGTGTTCGCCCGGCGGCTCGGACACCCGCGCTCCAACGGCTGCTCGTACGCGGATTCGCCGCATCACGTGCCGA
TCCAGCGCATGGCCAATGTGTCGCTGCAGCCCGCCCCCGAACAGATCAGCACCGACGACTTGATCGCCCGGGTCGAGGAC
GGCATCTACATCGTCGGCGACAAGTCGTGGTCAATCGACATGCAGCGCTACAACTTTCAGTTCACCGGCCAGCGGGTCTA
CCGGATTCGCGGCGGGCGGCTGGACGGCCAACTGCGCGACGTCGCCTATCAGGCCACCACGACCGATTTCTGGAATTCGA
TGGAGGCGGTGGGCGGCCCGGCCACCTGGCGGCTGGGCGGAGCGTTCAACTGCGGCAAGGCCCAGCCGGGCCAGATCGCG
CCCGTCAGCCACGGCTGCCCGTCCGCGCTGTTCCGCGGCGTCAATGTGCTGAACACCCGGACCGAGGGCGGCCGATGA

Upstream 100 bases:

>100_bases
CGCGGTGGACCGCGGTGCAACCCGGCGTTCGGCGCTGGCCATGAGGTAATTAAAGCGGGCGCTGCCACGGTTTGTGGGGA
CCGGCCGTTACGGTGGAGCC

Downstream 100 bases:

>100_bases
TCACCCCGCAGCATGTCGTCAACGTCGTGCTCGACGAGGCGGCCAAGCTGGGCGGCGCCGACGAGACCATGGTGCTGGTC
ACCGACAAGGTCGAGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MTPNRGIDADFLDLPRHELADAALSAATAAGASHADLRVHRLITEIIQLRDGELETAVINREVGLAVRVIVDGTWGFASH
AELAPSVAAETARRAVHVATTLATLSSERVELAPEPVYRDATWVSSYRIDPFDVSAADKIGVLGDYSGRLLAADGIDHVS
ALLTAVKEQTFYADTFGSSITQQRVRVLPSLEAVTVDAQAGSFDSMRTLAPPMGRGWEALAGDEVWNWTDELAQLPSLLA
EKVKAPTVAPGPTDLVIDPTNLWLTIHESIGHATEYDRAIGYEAAYAGTSFATPDKLGAMRYGSPVMNVTADRTVEFGLA
TIGYDDEGVAAQSWDLVRDGIFTGYQLDRVFARRLGHPRSNGCSYADSPHHVPIQRMANVSLQPAPEQISTDDLIARVED
GIYIVGDKSWSIDMQRYNFQFTGQRVYRIRGGRLDGQLRDVAYQATTTDFWNSMEAVGGPATWRLGGAFNCGKAQPGQIA
PVSHGCPSALFRGVNVLNTRTEGGR

Sequences:

>Translated_505_residues
MTPNRGIDADFLDLPRHELADAALSAATAAGASHADLRVHRLITEIIQLRDGELETAVINREVGLAVRVIVDGTWGFASH
AELAPSVAAETARRAVHVATTLATLSSERVELAPEPVYRDATWVSSYRIDPFDVSAADKIGVLGDYSGRLLAADGIDHVS
ALLTAVKEQTFYADTFGSSITQQRVRVLPSLEAVTVDAQAGSFDSMRTLAPPMGRGWEALAGDEVWNWTDELAQLPSLLA
EKVKAPTVAPGPTDLVIDPTNLWLTIHESIGHATEYDRAIGYEAAYAGTSFATPDKLGAMRYGSPVMNVTADRTVEFGLA
TIGYDDEGVAAQSWDLVRDGIFTGYQLDRVFARRLGHPRSNGCSYADSPHHVPIQRMANVSLQPAPEQISTDDLIARVED
GIYIVGDKSWSIDMQRYNFQFTGQRVYRIRGGRLDGQLRDVAYQATTTDFWNSMEAVGGPATWRLGGAFNCGKAQPGQIA
PVSHGCPSALFRGVNVLNTRTEGGR
>Mature_504_residues
TPNRGIDADFLDLPRHELADAALSAATAAGASHADLRVHRLITEIIQLRDGELETAVINREVGLAVRVIVDGTWGFASHA
ELAPSVAAETARRAVHVATTLATLSSERVELAPEPVYRDATWVSSYRIDPFDVSAADKIGVLGDYSGRLLAADGIDHVSA
LLTAVKEQTFYADTFGSSITQQRVRVLPSLEAVTVDAQAGSFDSMRTLAPPMGRGWEALAGDEVWNWTDELAQLPSLLAE
KVKAPTVAPGPTDLVIDPTNLWLTIHESIGHATEYDRAIGYEAAYAGTSFATPDKLGAMRYGSPVMNVTADRTVEFGLAT
IGYDDEGVAAQSWDLVRDGIFTGYQLDRVFARRLGHPRSNGCSYADSPHHVPIQRMANVSLQPAPEQISTDDLIARVEDG
IYIVGDKSWSIDMQRYNFQFTGQRVYRIRGGRLDGQLRDVAYQATTTDFWNSMEAVGGPATWRLGGAFNCGKAQPGQIAP
VSHGCPSALFRGVNVLNTRTEGGR

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=264, Percent_Identity=26.1363636363636, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 54641; Mature: 54509

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNRGIDADFLDLPRHELADAALSAATAAGASHADLRVHRLITEIIQLRDGELETAVIN
CCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
REVGLAVRVIVDGTWGFASHAELAPSVAAETARRAVHVATTLATLSSERVELAPEPVYRD
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
ATWVSSYRIDPFDVSAADKIGVLGDYSGRLLAADGIDHVSALLTAVKEQTFYADTFGSSI
CEEHHCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHEEHHHHCCHH
TQQRVRVLPSLEAVTVDAQAGSFDSMRTLAPPMGRGWEALAGDEVWNWTDELAQLPSLLA
HHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH
EKVKAPTVAPGPTDLVIDPTNLWLTIHESIGHATEYDRAIGYEAAYAGTSFATPDKLGAM
HHHCCCCCCCCCCCEEECCCCEEEEEEHHCCCHHHHHHHCCCHHHCCCCCCCCCHHHCCH
RYGSPVMNVTADRTVEFGLATIGYDDEGVAAQSWDLVRDGIFTGYQLDRVFARRLGHPRS
HCCCCCEEEECCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCC
NGCSYADSPHHVPIQRMANVSLQPAPEQISTDDLIARVEDGIYIVGDKSWSIDMQRYNFQ
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEEEEEE
FTGQRVYRIRGGRLDGQLRDVAYQATTTDFWNSMEAVGGPATWRLGGAFNCGKAQPGQIA
ECCCEEEEEECCCCCCHHHHHEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
PVSHGCPSALFRGVNVLNTRTEGGR
CCCCCCHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
TPNRGIDADFLDLPRHELADAALSAATAAGASHADLRVHRLITEIIQLRDGELETAVIN
CCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
REVGLAVRVIVDGTWGFASHAELAPSVAAETARRAVHVATTLATLSSERVELAPEPVYRD
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
ATWVSSYRIDPFDVSAADKIGVLGDYSGRLLAADGIDHVSALLTAVKEQTFYADTFGSSI
CEEHHCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHEEHHHHCCHH
TQQRVRVLPSLEAVTVDAQAGSFDSMRTLAPPMGRGWEALAGDEVWNWTDELAQLPSLLA
HHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH
EKVKAPTVAPGPTDLVIDPTNLWLTIHESIGHATEYDRAIGYEAAYAGTSFATPDKLGAM
HHHCCCCCCCCCCCEEECCCCEEEEEEHHCCCHHHHHHHCCCHHHCCCCCCCCCHHHCCH
RYGSPVMNVTADRTVEFGLATIGYDDEGVAAQSWDLVRDGIFTGYQLDRVFARRLGHPRS
HCCCCCEEEECCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCC
NGCSYADSPHHVPIQRMANVSLQPAPEQISTDDLIARVEDGIYIVGDKSWSIDMQRYNFQ
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEEEEEE
FTGQRVYRIRGGRLDGQLRDVAYQATTTDFWNSMEAVGGPATWRLGGAFNCGKAQPGQIA
ECCCEEEEEECCCCCCHHHHHEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
PVSHGCPSALFRGVNVLNTRTEGGR
CCCCCCHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]