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The map label for this gene is 41408186

Identifier: 41408186

GI number: 41408186

Start: 2308178

End: 2309551

Strand: Reverse

Name: 41408186

Synonym: MAP2088c

Alternate gene names: NA

Gene position: 2309551-2308178 (Counterclockwise)

Preceding gene: 41408187

Following gene: 41408185

Centisome position: 47.82

GC content: 70.89

Gene sequence:

>1374_bases
ATGATCACCCCGCAGCATGTCGTCAACGTCGTGCTCGACGAGGCGGCCAAGCTGGGCGGCGCCGACGAGACCATGGTGCT
GGTCACCGACAAGGTCGAGGCGACGCTGCGCTGGGCGGCCAATTCGATGACCACCAACGGGGTTTCGGTGAGCCGGAGCG
TGACGGTGATCTCGGTGGTGCGTCGCGGGTCCGGCGCGCGCATCGGAACGGTGGTGTCGGCCGAGGCGGACCCGCGGGTG
CTGCCCGGGCTGGTCGCGGCGTCGCAGCAGGCCGCCGCGTCGGCGCCGGAGGCCGGCGACGCCGCACCGCTGCTCGCCGA
CGCCGGGGAACCCGCCGACTGGGACGCGCCGGTACCCGGCACCGGGCCGTTGATCTTCGCCGACCTCGACGACTCGCTCG
GCCGGGGTTTCCGTGGCACCGATCGGCTCTACGGCTTTGCCCACCACAGTGTTTCGACCACTTTCGTGGCGACCTCGACC
GGGTTGCGGCGGCGCTTCACCCAACCCACGGGGGCGGTGGAGATCAACGCCAAGCGCGGCGACGCCAGCGCATGGGCGGG
TGTGGGGACACCCGACTTCGTCGATGTGCCAACCGATTCGCTGCTCGAGCAACTGTCGACGCGGCTGGGCTGGGCGCGGC
GCAGCGTGGAGTTGCCGGCGGGGCGTTACGAGACCATCATGCCGCCGTCGACGGTGGCCGACATGATGATCTACATGGCC
TGGTCGATGGCCGGCCGCGGCGCGCAGGAGGGCCGGACCGCGTTCTCGGCGCCCGGTGGCGGGACCCGGGTGGGCGAGCG
GCTCACCGACCTGCCGCTGACGCTGTTCTCCGATCCGATGGCGCCCGGGCTGATCTGCACGCCGTTCGTCGCGGTGAGCA
GCTCCTCGGAGACGGTGTCGGTGTTCGACAACGGCATGCCGATCGACCACGTCGACTGGATCCGCGACGGGGTGATCACC
GCGCTGGCCTATCCGCGGGCCACCGCCGCCAAATACGACGTCGACGTCGCGGTGGCCGCCGACAACCTGGTGATGACCGG
GGGGACGGCCAGCCAAGCCGACATGATCGCGGCCACCGAGCGCGGCCTGCTGTTGACCACGCTGTGGTACATCCGGGTCG
TCGAGCCCACCACGCTGTTGGTCACCGGCCTGACCCGTGACGGCGTCTACCTGATCGAGGACGGGCAGGTCACCGCGGCC
GTCAACAACTTCCGGTTCAACGAGAGCCCGCTGGACCTGCTGCGACGGGCCACCGAGGCCGGCGTCAGCGAGAAGACGCT
GCCCCGCGAGTGGGGAGATTGGGCCACCCGCGCCGCGATGCCGGCGCTGCGCATCCCCGACTTCCACATGTCCTCGGTGA
GCCAGGCCCAGTAG

Upstream 100 bases:

>100_bases
GCAAGGCCCAGCCGGGCCAGATCGCGCCCGTCAGCCACGGCTGCCCGTCCGCGCTGTTCCGCGGCGTCAATGTGCTGAAC
ACCCGGACCGAGGGCGGCCG

Downstream 100 bases:

>100_bases
TCGATTGCCGCCGGGCCGCGCGCGTTCTAGCGTGTGACGGATGGCGGCTCCGGTTTCGCTTCGAGAAGACCAGCTCACCC
GGTTGGTGGCGGTGTTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: TldD/PmbA Family Protein; CalR5 Protein; TldD Protein; Modulator Of DNA Gyrase; TldD/PmbA Family; LOW QUALITY PROTEIN CalR5 Protein; Modulator Of DNA Gyrase Protein TldD; Zn-Dependent Protease; Microcin-Processing Peptidase PmbA; Zn-Dependent Protease-Like Protein; DNA Gyrase Modulator Family Protein

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MITPQHVVNVVLDEAAKLGGADETMVLVTDKVEATLRWAANSMTTNGVSVSRSVTVISVVRRGSGARIGTVVSAEADPRV
LPGLVAASQQAAASAPEAGDAAPLLADAGEPADWDAPVPGTGPLIFADLDDSLGRGFRGTDRLYGFAHHSVSTTFVATST
GLRRRFTQPTGAVEINAKRGDASAWAGVGTPDFVDVPTDSLLEQLSTRLGWARRSVELPAGRYETIMPPSTVADMMIYMA
WSMAGRGAQEGRTAFSAPGGGTRVGERLTDLPLTLFSDPMAPGLICTPFVAVSSSSETVSVFDNGMPIDHVDWIRDGVIT
ALAYPRATAAKYDVDVAVAADNLVMTGGTASQADMIAATERGLLLTTLWYIRVVEPTTLLVTGLTRDGVYLIEDGQVTAA
VNNFRFNESPLDLLRRATEAGVSEKTLPREWGDWATRAAMPALRIPDFHMSSVSQAQ

Sequences:

>Translated_457_residues
MITPQHVVNVVLDEAAKLGGADETMVLVTDKVEATLRWAANSMTTNGVSVSRSVTVISVVRRGSGARIGTVVSAEADPRV
LPGLVAASQQAAASAPEAGDAAPLLADAGEPADWDAPVPGTGPLIFADLDDSLGRGFRGTDRLYGFAHHSVSTTFVATST
GLRRRFTQPTGAVEINAKRGDASAWAGVGTPDFVDVPTDSLLEQLSTRLGWARRSVELPAGRYETIMPPSTVADMMIYMA
WSMAGRGAQEGRTAFSAPGGGTRVGERLTDLPLTLFSDPMAPGLICTPFVAVSSSSETVSVFDNGMPIDHVDWIRDGVIT
ALAYPRATAAKYDVDVAVAADNLVMTGGTASQADMIAATERGLLLTTLWYIRVVEPTTLLVTGLTRDGVYLIEDGQVTAA
VNNFRFNESPLDLLRRATEAGVSEKTLPREWGDWATRAAMPALRIPDFHMSSVSQAQ
>Mature_457_residues
MITPQHVVNVVLDEAAKLGGADETMVLVTDKVEATLRWAANSMTTNGVSVSRSVTVISVVRRGSGARIGTVVSAEADPRV
LPGLVAASQQAAASAPEAGDAAPLLADAGEPADWDAPVPGTGPLIFADLDDSLGRGFRGTDRLYGFAHHSVSTTFVATST
GLRRRFTQPTGAVEINAKRGDASAWAGVGTPDFVDVPTDSLLEQLSTRLGWARRSVELPAGRYETIMPPSTVADMMIYMA
WSMAGRGAQEGRTAFSAPGGGTRVGERLTDLPLTLFSDPMAPGLICTPFVAVSSSSETVSVFDNGMPIDHVDWIRDGVIT
ALAYPRATAAKYDVDVAVAADNLVMTGGTASQADMIAATERGLLLTTLWYIRVVEPTTLLVTGLTRDGVYLIEDGQVTAA
VNNFRFNESPLDLLRRATEAGVSEKTLPREWGDWATRAAMPALRIPDFHMSSVSQAQ

Specific function: Unknown

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48319; Mature: 48319

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPQHVVNVVLDEAAKLGGADETMVLVTDKVEATLRWAANSMTTNGVSVSRSVTVISVV
CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHEEHHHHHCCCCCCCEEECCCEEEEEEE
RRGSGARIGTVVSAEADPRVLPGLVAASQQAAASAPEAGDAAPLLADAGEPADWDAPVPG
CCCCCCEEEEEEECCCCCCCCCHHHHHCHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC
TGPLIFADLDDSLGRGFRGTDRLYGFAHHSVSTTFVATSTGLRRRFTQPTGAVEINAKRG
CCCEEEEECCHHHCCCCCCCHHHEEEECCCCEEEEEEECHHHHHHCCCCCCCEEEEECCC
DASAWAGVGTPDFVDVPTDSLLEQLSTRLGWARRSVELPAGRYETIMPPSTVADMMIYMA
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHH
WSMAGRGAQEGRTAFSAPGGGTRVGERLTDLPLTLFSDPMAPGLICTPFVAVSSSSETVS
HHHCCCCCCCCCEEECCCCCCCHHHHHHHCCCHHHHCCCCCCCEEECCEEEECCCCCEEE
VFDNGMPIDHVDWIRDGVITALAYPRATAAKYDVDVAVAADNLVMTGGTASQADMIAATE
EECCCCCCCHHHHHHHHHHHHHCCCCCCCCEECEEEEEEECCEEEECCCCCCCHHHHHCC
RGLLLTTLWYIRVVEPTTLLVTGLTRDGVYLIEDGQVTAAVNNFRFNESPLDLLRRATEA
CCHHEEEEEEHEEECCCEEEEEECCCCCEEEEECCEEEEEEECCCCCCCHHHHHHHHHHC
GVSEKTLPREWGDWATRAAMPALRIPDFHMSSVSQAQ
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITPQHVVNVVLDEAAKLGGADETMVLVTDKVEATLRWAANSMTTNGVSVSRSVTVISVV
CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHEEHHHHHCCCCCCCEEECCCEEEEEEE
RRGSGARIGTVVSAEADPRVLPGLVAASQQAAASAPEAGDAAPLLADAGEPADWDAPVPG
CCCCCCEEEEEEECCCCCCCCCHHHHHCHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC
TGPLIFADLDDSLGRGFRGTDRLYGFAHHSVSTTFVATSTGLRRRFTQPTGAVEINAKRG
CCCEEEEECCHHHCCCCCCCHHHEEEECCCCEEEEEEECHHHHHHCCCCCCCEEEEECCC
DASAWAGVGTPDFVDVPTDSLLEQLSTRLGWARRSVELPAGRYETIMPPSTVADMMIYMA
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHH
WSMAGRGAQEGRTAFSAPGGGTRVGERLTDLPLTLFSDPMAPGLICTPFVAVSSSSETVS
HHHCCCCCCCCCEEECCCCCCCHHHHHHHCCCHHHHCCCCCCCEEECCEEEECCCCCEEE
VFDNGMPIDHVDWIRDGVITALAYPRATAAKYDVDVAVAADNLVMTGGTASQADMIAATE
EECCCCCCCHHHHHHHHHHHHHCCCCCCCCEECEEEEEEECCEEEECCCCCCCHHHHHCC
RGLLLTTLWYIRVVEPTTLLVTGLTRDGVYLIEDGQVTAAVNNFRFNESPLDLLRRATEA
CCHHEEEEEEHEEECCCEEEEEECCCCCEEEEECCEEEEEEECCCCCCCHHHHHHHHHHC
GVSEKTLPREWGDWATRAAMPALRIPDFHMSSVSQAQ
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA