| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408161
Identifier: 41408161
GI number: 41408161
Start: 2270995
End: 2271363
Strand: Reverse
Name: 41408161
Synonym: MAP2063c
Alternate gene names: NA
Gene position: 2271363-2270995 (Counterclockwise)
Preceding gene: 41408165
Following gene: 41408158
Centisome position: 47.03
GC content: 68.83
Gene sequence:
>369_bases GTGTCTGTTGTGCAGTTCACCTCGGTGTCGCCGATCGTCCCGGTCCGAGACCTCGATGTCGCCCTGGACCGGTATCGCCG GCTCGGATTCGACGCGCGGGCATACCAGGGCCCCGAGCGGTACGGTTTCGCCGACCGCGGATCGGTGTCGATCCACCTGA CCGAATGGGACGAGCACGACCCGTCGCGCACGGCGGCCAGCGTCTACTTCTACGTCGGTGACGCCGACGCCCTGTATGCG GAGTGGGCGGCGTTGGACAACCTCGGCGGGCGCCTGTTGGCTCCGCACGACACACCGTACGGTTTGCGCGAATTCGCCTA CGTGGACCCCGACGGCACCGCGCACCGGGTCGGCTCGCCGCGCAGCTGA
Upstream 100 bases:
>100_bases CCCATTTTTCGGAGCTTACGACAGCAGGACGGTGCCAACTGCGAATTCGCGACAGCTGCGCCCGGTTGGACGATGCTGAA CCACGGGCTATGTTCGCCGG
Downstream 100 bases:
>100_bases TCACGTCTTTTCCGTTGAGAACGGCGGAGTTTCGTCAGCTGTTGGGGCCGATGCGGCCTGGCTGCGGGCCAGCGCCACCG TCGCGGCCGCCATCACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSVVQFTSVSPIVPVRDLDVALDRYRRLGFDARAYQGPERYGFADRGSVSIHLTEWDEHDPSRTAASVYFYVGDADALYA EWAALDNLGGRLLAPHDTPYGLREFAYVDPDGTAHRVGSPRS
Sequences:
>Translated_122_residues MSVVQFTSVSPIVPVRDLDVALDRYRRLGFDARAYQGPERYGFADRGSVSIHLTEWDEHDPSRTAASVYFYVGDADALYA EWAALDNLGGRLLAPHDTPYGLREFAYVDPDGTAHRVGSPRS >Mature_121_residues SVVQFTSVSPIVPVRDLDVALDRYRRLGFDARAYQGPERYGFADRGSVSIHLTEWDEHDPSRTAASVYFYVGDADALYAE WAALDNLGGRLLAPHDTPYGLREFAYVDPDGTAHRVGSPRS
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13578; Mature: 13447
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVQFTSVSPIVPVRDLDVALDRYRRLGFDARAYQGPERYGFADRGSVSIHLTEWDEHD CCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC PSRTAASVYFYVGDADALYAEWAALDNLGGRLLAPHDTPYGLREFAYVDPDGTAHRVGSP CCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCEECCCCC RS CC >Mature Secondary Structure SVVQFTSVSPIVPVRDLDVALDRYRRLGFDARAYQGPERYGFADRGSVSIHLTEWDEHD CEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC PSRTAASVYFYVGDADALYAEWAALDNLGGRLLAPHDTPYGLREFAYVDPDGTAHRVGSP CCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCEECCCCC RS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA