Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408138

Identifier: 41408138

GI number: 41408138

Start: 2247967

End: 2248323

Strand: Reverse

Name: 41408138

Synonym: MAP2040c

Alternate gene names: NA

Gene position: 2248323-2247967 (Counterclockwise)

Preceding gene: 41408140

Following gene: 41408136

Centisome position: 46.55

GC content: 65.55

Gene sequence:

>357_bases
GTGAATCACTACACCTACCGAGTCGCCTGGTCGCCATACCTCGGCGAATACGTCGGCACCTGCCTCGAATTGCCCTACGT
GCGCCGCCAGGGTGCGACGGCGCAGGAGGCGATGGGCGCGATCGAGGAGGCCGTCGACTGGTACATCGCCAGCGCTGAGT
CCTCGGGGGAAACGCTGCCGACGCCGATGGCCGACCGGCACTACAGCGGCACCATCGTCGTCCGGACGTCCCCGGAACTG
CACAGCCGGCTGGCCATGGAAGCCGCCGAACAAAGGGTCTCGATGAACCAATGGGTGGTGCAGAAACTGTCTGGACGACG
CCCGAGCGAGACGTTCGGGCTGTCCGGATTCGACTAG

Upstream 100 bases:

>100_bases
AGGTCGGGACCCGGGGACAACCCGGCCGCCTAAGTCCGGAGCTCTCCGGGTGGGGATGAGTGACTCGCGAATCCGCCAGC
GCCCGTGCTATCAACCCGGC

Downstream 100 bases:

>100_bases
CGAAAAGCTACGACGCGTAGCGAAAGGCTACGACGCCTCCGCGCGGCTTTCCAGGTTCTTCACCGGGGCCGGGTCGTTTT
CGGTCAGCCCCACCTTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Xin-Antitoxin System Antitoxin Component HicB Family; HicB Family

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNHYTYRVAWSPYLGEYVGTCLELPYVRRQGATAQEAMGAIEEAVDWYIASAESSGETLPTPMADRHYSGTIVVRTSPEL
HSRLAMEAAEQRVSMNQWVVQKLSGRRPSETFGLSGFD

Sequences:

>Translated_118_residues
MNHYTYRVAWSPYLGEYVGTCLELPYVRRQGATAQEAMGAIEEAVDWYIASAESSGETLPTPMADRHYSGTIVVRTSPEL
HSRLAMEAAEQRVSMNQWVVQKLSGRRPSETFGLSGFD
>Mature_118_residues
MNHYTYRVAWSPYLGEYVGTCLELPYVRRQGATAQEAMGAIEEAVDWYIASAESSGETLPTPMADRHYSGTIVVRTSPEL
HSRLAMEAAEQRVSMNQWVVQKLSGRRPSETFGLSGFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13205; Mature: 13205

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHYTYRVAWSPYLGEYVGTCLELPYVRRQGATAQEAMGAIEEAVDWYIASAESSGETLP
CCCEEEEEEECCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
TPMADRHYSGTIVVRTSPELHSRLAMEAAEQRVSMNQWVVQKLSGRRPSETFGLSGFD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNHYTYRVAWSPYLGEYVGTCLELPYVRRQGATAQEAMGAIEEAVDWYIASAESSGETLP
CCCEEEEEEECCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
TPMADRHYSGTIVVRTSPELHSRLAMEAAEQRVSMNQWVVQKLSGRRPSETFGLSGFD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA