Click here to switch to the map view.

The map label for this gene is yeiE [C]

Identifier: 41408136

GI number: 41408136

Start: 2246450

End: 2247397

Strand: Reverse

Name: yeiE [C]

Synonym: MAP2038c

Alternate gene names: 41408136

Gene position: 2247397-2246450 (Counterclockwise)

Preceding gene: 41408138

Following gene: 41408132

Centisome position: 46.53

GC content: 71.52

Gene sequence:

>948_bases
ATGCCGCTCAGCCCGAGGATGCCCGAACTCGCCTCGTTCGAGGCGTTTTTGGCGATCGCCGAGACGGGCAGCCTCGGCCG
GGCCGCCCGCGAACTCGAGCTTACCCAGCAGGCGATCTCCCGGCGGCTGGCCACCATGGAGGCCCAGATCGGTGTCACCT
TGGCGGTGCGCACCACGCGCGGTTCACAATTGACGCCGGCCGGCCTCATCGTCGCCGACTGGGCGGCCCGGCTGCTCGAG
GTCGCCCACGAGATCGACGCCGGCCTGGGCTCGCTGCGCAAGGAGGGCCGGGAGCGGATCCGGGTGGCGGCCAGTCAGAC
GATCTCCGAACAGCTGATGCCGCATTGGCTGCTGTCGCTGCAGGCCGAGGCGACCCGGCGCGGCGAGGCCGCGCCGCAGG
TGATCCTGACCGCGACCAACAGCGAACACGCCATCGCCTCGGTCCGCGACGGCAGCGCCGATCTTGGATTCGTCGAAAAC
CCCGGCACACCAAAGGGTTTGGGCAGCTGTGTGGTGGGGGAGGACGAGCTGGTGATCGTGGTGCCGCCCACCCACAAGTG
GGCGCGCCGCTCCCGCGTGGTGACCGCACGCGAACTCGCCCAGACCCCCCTGGTCGCCCGCGAACCGCATTCGGGAATCC
GCGATTCGCTGACGGTGGCGTTGCGCAAGGTGCTCGGGGAGGACATGCAGCAGGCCGCGCCGGTGCTGGAACTGACGTCC
GCGGCGGCCATGCGCGCCGCCGTGCTGGCCGGCGCGGGGCCGGCCGCCATGAGCCGGCTGGCGGTGGCCGACGACCTGGC
GGTCGGCCGGCTGCACGCCGTCGAGATCCCGAAGTTGGACCTGCGACGCAAGTTTCGGGCCATCTGGATCGGCGGGCGCA
CCCCGCCCGCCGGGGCCATCCGCGACTTGCTCAGCCACATCATCGCCCGCACGGCGGTATCGAAGTGA

Upstream 100 bases:

>100_bases
TTCCATGCTGGCGGCCCACGCCGGGCGGCAGTAGAGGTGCCAGCGTTGTGGTGTCACAAGCTATAGTTGTGTCACACGAT
TTGATTGTGAGCCCGCGACC

Downstream 100 bases:

>100_bases
CTCAGGCTGCGGCGTCGGCCGACAGCGCCTCGTCGTAACGATCCAGCACGGTCTCGGCCACCAGTCGGTGCGCCCCCAAC
GGGGCGGCCATGCGAATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MPLSPRMPELASFEAFLAIAETGSLGRAARELELTQQAISRRLATMEAQIGVTLAVRTTRGSQLTPAGLIVADWAARLLE
VAHEIDAGLGSLRKEGRERIRVAASQTISEQLMPHWLLSLQAEATRRGEAAPQVILTATNSEHAIASVRDGSADLGFVEN
PGTPKGLGSCVVGEDELVIVVPPTHKWARRSRVVTARELAQTPLVAREPHSGIRDSLTVALRKVLGEDMQQAAPVLELTS
AAAMRAAVLAGAGPAAMSRLAVADDLAVGRLHAVEIPKLDLRRKFRAIWIGGRTPPAGAIRDLLSHIIARTAVSK

Sequences:

>Translated_315_residues
MPLSPRMPELASFEAFLAIAETGSLGRAARELELTQQAISRRLATMEAQIGVTLAVRTTRGSQLTPAGLIVADWAARLLE
VAHEIDAGLGSLRKEGRERIRVAASQTISEQLMPHWLLSLQAEATRRGEAAPQVILTATNSEHAIASVRDGSADLGFVEN
PGTPKGLGSCVVGEDELVIVVPPTHKWARRSRVVTARELAQTPLVAREPHSGIRDSLTVALRKVLGEDMQQAAPVLELTS
AAAMRAAVLAGAGPAAMSRLAVADDLAVGRLHAVEIPKLDLRRKFRAIWIGGRTPPAGAIRDLLSHIIARTAVSK
>Mature_314_residues
PLSPRMPELASFEAFLAIAETGSLGRAARELELTQQAISRRLATMEAQIGVTLAVRTTRGSQLTPAGLIVADWAARLLEV
AHEIDAGLGSLRKEGRERIRVAASQTISEQLMPHWLLSLQAEATRRGEAAPQVILTATNSEHAIASVRDGSADLGFVENP
GTPKGLGSCVVGEDELVIVVPPTHKWARRSRVVTARELAQTPLVAREPHSGIRDSLTVALRKVLGEDMQQAAPVLELTSA
AAMRAAVLAGAGPAAMSRLAVADDLAVGRLHAVEIPKLDLRRKFRAIWIGGRTPPAGAIRDLLSHIIARTAVSK

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=282, Percent_Identity=31.5602836879433, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787879, Length=250, Percent_Identity=28, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788748, Length=284, Percent_Identity=29.9295774647887, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33557; Mature: 33426

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSPRMPELASFEAFLAIAETGSLGRAARELELTQQAISRRLATMEAQIGVTLAVRTTR
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
GSQLTPAGLIVADWAARLLEVAHEIDAGLGSLRKEGRERIRVAASQTISEQLMPHWLLSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEATRRGEAAPQVILTATNSEHAIASVRDGSADLGFVENPGTPKGLGSCVVGEDELVIV
HHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEE
VPPTHKWARRSRVVTARELAQTPLVAREPHSGIRDSLTVALRKVLGEDMQQAAPVLELTS
ECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH
AAAMRAAVLAGAGPAAMSRLAVADDLAVGRLHAVEIPKLDLRRKFRAIWIGGRTPPAGAI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHCCEEEEEECCCCCCHHHH
RDLLSHIIARTAVSK
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLSPRMPELASFEAFLAIAETGSLGRAARELELTQQAISRRLATMEAQIGVTLAVRTTR
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
GSQLTPAGLIVADWAARLLEVAHEIDAGLGSLRKEGRERIRVAASQTISEQLMPHWLLSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEATRRGEAAPQVILTATNSEHAIASVRDGSADLGFVENPGTPKGLGSCVVGEDELVIV
HHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEE
VPPTHKWARRSRVVTARELAQTPLVAREPHSGIRDSLTVALRKVLGEDMQQAAPVLELTS
ECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH
AAAMRAAVLAGAGPAAMSRLAVADDLAVGRLHAVEIPKLDLRRKFRAIWIGGRTPPAGAI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHCCEEEEEECCCCCCHHHH
RDLLSHIIARTAVSK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]