Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408119

Identifier: 41408119

GI number: 41408119

Start: 2229179

End: 2229928

Strand: Reverse

Name: 41408119

Synonym: MAP2021c

Alternate gene names: NA

Gene position: 2229928-2229179 (Counterclockwise)

Preceding gene: 41408121

Following gene: 41408117

Centisome position: 46.17

GC content: 72.4

Gene sequence:

>750_bases
GTGGCCCGCCGCGACGTCCTGCGCCTCGCCGGCGCCATGCCGGTGATCCTGGCCGCCGGTGCGGTACTGCCCGGCCCGCG
CGCGGCGGCCGGTGTGGCCGGCATGTCGGTCTTCCTCGACCCGGGCCACAACGCCGTCAACGACGCGTCGATCAACCGGC
CGGTGCCCAACGGTCGCGGCGGCAGCAAGCCGTGCCAAACCTCGGGGGCGGCGGCCGACGACGGCTACCCCGAGCACGCG
TTCACCTGGGCGGTGGTCGGCCTGATCAACGCGTCGCTGAACCAGATGGGCGTGCACACCCAGCTATCCCGCGCCGACGA
CAGCGGCGTCGGTCCGTGCATCGACCAGCGCGCCGACGCGGCCAACGCGATGCGGCCGGACGCGATCGTGAGCATCCACG
CCGACGGCGGGCCCGGGTCCGGCAGCGGATTCCACGTCAACTACTCCAGCCCGCCGCTGAACGACGTGCAGGCCGGCCCG
GCCGTGCAGCTCGCTCACGCGATGCGAGATGCCTTGGCGCAGGCCGGTTTTCAGCCCGCCACCTACATCGGCTCGGACGG
CCTGTACGGCCGCGACGACCTGGCCGGGCTGAACCTGGCTCAGTATCCGGCGGTGCTGGTCGAACTCGGCAACATGAAGA
ACGCCGGTGACGCCGCGCGAATGGAAAGCCCCGATGGCCGGGCGGCATACGCCGCCGCGGTCACCGCGGGAATCGTCGCC
TTCCTGAACGCGAAAGCGGCGTCGGGCTAG

Upstream 100 bases:

>100_bases
TTCGACCACGGACATGCGCACGACCGTAACATACTTTTTAGTATGTAGAGCCCGCGGTTGTTACCATCGCGCCGTGAGTG
ATCGCCGAGGGCCGCGGTCC

Downstream 100 bases:

>100_bases
CCGAGCGGCTGCTCAGCTGCCGACGCCGCCGCCGCTCGGCGCCGCCACCGCGCCGCTCGGCGCCGCCACCGTCGCCGGCC
CGCCCAGGCCGAGGTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; N-Acetymuramyl-L-Alanine Amidase; Glutaminase; Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase-Like Protein; N-Acetymuramyl-L-Alanine Amidase-Related Protein; Cell Wall Glycoprotein Hydrolase; Secreted Protein

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRGGSKPCQTSGAAADDGYPEHA
FTWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADAANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGP
AVQLAHAMRDALAQAGFQPATYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVA
FLNAKAASG

Sequences:

>Translated_249_residues
MARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRGGSKPCQTSGAAADDGYPEHA
FTWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADAANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGP
AVQLAHAMRDALAQAGFQPATYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVA
FLNAKAASG
>Mature_248_residues
ARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRGGSKPCQTSGAAADDGYPEHAF
TWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADAANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGPA
VQLAHAMRDALAQAGFQPATYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVAF
LNAKAASG

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25048; Mature: 24917

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRG
CCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCC
GSKPCQTSGAAADDGYPEHAFTWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHH
ANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGPAVQLAHAMRDALAQAGFQPA
HHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
TYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVA
EEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
FLNAKAASG
HHHHHCCCC
>Mature Secondary Structure 
ARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRG
CHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCC
GSKPCQTSGAAADDGYPEHAFTWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHH
ANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGPAVQLAHAMRDALAQAGFQPA
HHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
TYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVA
EEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
FLNAKAASG
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA