| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408119
Identifier: 41408119
GI number: 41408119
Start: 2229179
End: 2229928
Strand: Reverse
Name: 41408119
Synonym: MAP2021c
Alternate gene names: NA
Gene position: 2229928-2229179 (Counterclockwise)
Preceding gene: 41408121
Following gene: 41408117
Centisome position: 46.17
GC content: 72.4
Gene sequence:
>750_bases GTGGCCCGCCGCGACGTCCTGCGCCTCGCCGGCGCCATGCCGGTGATCCTGGCCGCCGGTGCGGTACTGCCCGGCCCGCG CGCGGCGGCCGGTGTGGCCGGCATGTCGGTCTTCCTCGACCCGGGCCACAACGCCGTCAACGACGCGTCGATCAACCGGC CGGTGCCCAACGGTCGCGGCGGCAGCAAGCCGTGCCAAACCTCGGGGGCGGCGGCCGACGACGGCTACCCCGAGCACGCG TTCACCTGGGCGGTGGTCGGCCTGATCAACGCGTCGCTGAACCAGATGGGCGTGCACACCCAGCTATCCCGCGCCGACGA CAGCGGCGTCGGTCCGTGCATCGACCAGCGCGCCGACGCGGCCAACGCGATGCGGCCGGACGCGATCGTGAGCATCCACG CCGACGGCGGGCCCGGGTCCGGCAGCGGATTCCACGTCAACTACTCCAGCCCGCCGCTGAACGACGTGCAGGCCGGCCCG GCCGTGCAGCTCGCTCACGCGATGCGAGATGCCTTGGCGCAGGCCGGTTTTCAGCCCGCCACCTACATCGGCTCGGACGG CCTGTACGGCCGCGACGACCTGGCCGGGCTGAACCTGGCTCAGTATCCGGCGGTGCTGGTCGAACTCGGCAACATGAAGA ACGCCGGTGACGCCGCGCGAATGGAAAGCCCCGATGGCCGGGCGGCATACGCCGCCGCGGTCACCGCGGGAATCGTCGCC TTCCTGAACGCGAAAGCGGCGTCGGGCTAG
Upstream 100 bases:
>100_bases TTCGACCACGGACATGCGCACGACCGTAACATACTTTTTAGTATGTAGAGCCCGCGGTTGTTACCATCGCGCCGTGAGTG ATCGCCGAGGGCCGCGGTCC
Downstream 100 bases:
>100_bases CCGAGCGGCTGCTCAGCTGCCGACGCCGCCGCCGCTCGGCGCCGCCACCGCGCCGCTCGGCGCCGCCACCGTCGCCGGCC CGCCCAGGCCGAGGTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; N-Acetymuramyl-L-Alanine Amidase; Glutaminase; Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase-Like Protein; N-Acetymuramyl-L-Alanine Amidase-Related Protein; Cell Wall Glycoprotein Hydrolase; Secreted Protein
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRGGSKPCQTSGAAADDGYPEHA FTWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADAANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGP AVQLAHAMRDALAQAGFQPATYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVA FLNAKAASG
Sequences:
>Translated_249_residues MARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRGGSKPCQTSGAAADDGYPEHA FTWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADAANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGP AVQLAHAMRDALAQAGFQPATYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVA FLNAKAASG >Mature_248_residues ARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRGGSKPCQTSGAAADDGYPEHAF TWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADAANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGPA VQLAHAMRDALAQAGFQPATYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVAF LNAKAASG
Specific function: Unknown
COG id: COG0860
COG function: function code M; N-acetylmuramoyl-L-alanine amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25048; Mature: 24917
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRG CCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCC GSKPCQTSGAAADDGYPEHAFTWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHH ANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGPAVQLAHAMRDALAQAGFQPA HHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC TYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVA EEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH FLNAKAASG HHHHHCCCC >Mature Secondary Structure ARRDVLRLAGAMPVILAAGAVLPGPRAAAGVAGMSVFLDPGHNAVNDASINRPVPNGRG CHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCC GSKPCQTSGAAADDGYPEHAFTWAVVGLINASLNQMGVHTQLSRADDSGVGPCIDQRADA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHH ANAMRPDAIVSIHADGGPGSGSGFHVNYSSPPLNDVQAGPAVQLAHAMRDALAQAGFQPA HHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC TYIGSDGLYGRDDLAGLNLAQYPAVLVELGNMKNAGDAARMESPDGRAAYAAAVTAGIVA EEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH FLNAKAASG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA