| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408117
Identifier: 41408117
GI number: 41408117
Start: 2227909
End: 2228151
Strand: Reverse
Name: 41408117
Synonym: MAP2019c
Alternate gene names: NA
Gene position: 2228151-2227909 (Counterclockwise)
Preceding gene: 41408119
Following gene: 41408116
Centisome position: 46.13
GC content: 66.26
Gene sequence:
>243_bases ATGGCAACGGGTGAAACGGGTTTCGACGACGTGACCTACGACCTGATCTCCGTCCAGTACCACTCGCTCAAGGCGGGCCA CGACTACGGCCAGTACGTGCGCGACGCGAAGAACGCCGGCATGGAGGAGATCGCCTCCTTCTTCAGCGAGGTGATGGCGC AGGACTCCGAGCGGGCGCGGCGCTGCCACGAGTTCCTCGGCCAACTGCAGGGGACGCCCGCCGCCGGCCCGGCCACAAGA TAA
Upstream 100 bases:
>100_bases TGTACCAAGACAGTCTAAGCGTCGTTTGGGGTATCCACGGGCGGGTAGCCGGAGACCGCGAGCACAAAATCCACTACTCA CGGTCTGGCGAGGTGACGAC
Downstream 100 bases:
>100_bases GAATCACCGCGAGCCGCCGCGGCCGCCTGCCGAGCTAATACCCGAACCGGGTCAGCCCGAGCGGGGCCCGGACCGGCGTT TGTGCTGACAAGGACGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MATGETGFDDVTYDLISVQYHSLKAGHDYGQYVRDAKNAGMEEIASFFSEVMAQDSERARRCHEFLGQLQGTPAAGPATR
Sequences:
>Translated_80_residues MATGETGFDDVTYDLISVQYHSLKAGHDYGQYVRDAKNAGMEEIASFFSEVMAQDSERARRCHEFLGQLQGTPAAGPATR >Mature_79_residues ATGETGFDDVTYDLISVQYHSLKAGHDYGQYVRDAKNAGMEEIASFFSEVMAQDSERARRCHEFLGQLQGTPAAGPATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8803; Mature: 8672
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGETGFDDVTYDLISVQYHSLKAGHDYGQYVRDAKNAGMEEIASFFSEVMAQDSERAR CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH RCHEFLGQLQGTPAAGPATR HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ATGETGFDDVTYDLISVQYHSLKAGHDYGQYVRDAKNAGMEEIASFFSEVMAQDSERAR CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH RCHEFLGQLQGTPAAGPATR HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA