| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408013
Identifier: 41408013
GI number: 41408013
Start: 2115735
End: 2117180
Strand: Direct
Name: 41408013
Synonym: MAP1915
Alternate gene names: NA
Gene position: 2115735-2117180 (Clockwise)
Preceding gene: 41408012
Following gene: 41408017
Centisome position: 43.81
GC content: 67.43
Gene sequence:
>1446_bases ATGGGTTCGACAACGCAGGGCGTCGACTCGCCGAACCGGCTCGGTGAGCACGCGGTGGTACTGGGTGCCGGCATCGCGGG TTTGCTTGCCGCGCGCGTACTTTCGGAGTTCTACGATTCGGTCAGCGTGGTCGAGCGGGACAAATTGCCCGACTATCCGT GCCACCGCAGGGGCATCCCCCAGGGCCGTCACGTGCACAACTTCTACAGCCGCGGCCTACAAGTCCTGGAGGAATTGTTT CCCGGTCTGCTCGATGACCTGGCCCGGGCGGGGGCGGTCGTCGTCGATGACGGTGACCTGTCGCGGTTCTACGTGCGCTT CGGGCGCTACGAAATGAAGAACTCGGGCGCGTTCGCCGATCCGGACGCATTGGCGCTGCACATGACGACCCGGCCGTTCA TGGAGTTTCACCTGCGCCGCCGCGTCAAGTCCCTGCCGAACGTGACGTTCCTCGACGGACACGACGTGTGCGACCTCCTC AACACCGCGGACATCGTCAACGGCGTGCGAATCACCCGGCGCTACAGCGGTTTTCTCATGGCGCTGGATGCCGATTTGGT CGTCGACGCCATGGGGCGCTCGGCCCGCACGCCGGCATTTCTGGAGAGCCTGGGCTACCAACGGCCGACCGAGGAGCGGG CGGTGGCCCGATACGGCTACGCGAGCCAACAGTTGAGCATGCCCGAGGCGTCGATCGCCCAGCGGCTGGTCATGTTCAAC CCGGGGGGCGGCAGGCCGGGGGGCTTGCTGCTCGCCAACGAACACGACACGTTCATCCTGGCGATCGGCGTGCCGGCCGA CACCGGCGAGCCACCAACCGATTTCGCCGCGATGCTCGCGATGGCCGAGCCGTCGCTGCCCCCGGCCATCGTCGAGGGCC TGCGCCGCGCCTACCCCATCGGGGAAGCCGTGACATACCACCACACCGCCGCGTTCTGGCGGCGCTACGACCAGCTGGCC GAGTTCCCGTCGGGTCTGCTGGTGATGGGCGACGCACTGTGCAGTCTCGACCCGACCTACGGCCAAGGCATGACGATCGC CGCGCTGGAAGCGCTGACCCTGCGCGAGTGCCTGCGCGCGGGAGATGCCCTGCTGGCGCAACGCTTTTTCCGGGCGACGG CCCAGTACATCGGCGCGACGTGGGCCGTCAATCAGGCCAGAGACCGGACCACGTCCGGCGTCTACCACGGGGTGCGGCAG CGGCTGCAAGGCTGGATATCCAGGGCGACATTGAATGCGTCAACCCAGGATGTCGTGCTGACCGAACGCTGCTTTCGCGT CTTCAACTTCATCGACCCGCCGTCGCGGCTGCGGGATCCCGCTCTGTTACCGCGCATCGTGTGGGGCAACCTACGGGCCC GGTTCGCCGCAAAGCGACACCGCTCCGAGACGGCTCCGGTCGGGCCGGCGAGCCCGCCGGGGAACAGGATTGCGGTACGG TCCTAG
Upstream 100 bases:
>100_bases GCGGCTCAGCCGCGTGGATCGCGCCCCCGGGGGCGACACGATCTTAAAGTGATCACAAGGTTCTCTTATTTTTCTTAATT TTGGTGTACCGTCCTTTCGT
Downstream 100 bases:
>100_bases TCGCGCAGCATCTCGGCGACCAGGAAGGCCAACTCCAGCGACTGCTGGGTGTTCAGCCTTGGGTCGCAAGCGGTTTCGTA GCGGCCGACCAGATCCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: Monooxygenase; FAD Dependent Oxidoreductase; Hydroxylase; Oxygenase; Phytoene Dehydrogenase; Squalene Monooxygenase; Oxidoreductase; Monensin Epoxidase; Epoxidase; FAD Dependent Dehydrogenase
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MGSTTQGVDSPNRLGEHAVVLGAGIAGLLAARVLSEFYDSVSVVERDKLPDYPCHRRGIPQGRHVHNFYSRGLQVLEELF PGLLDDLARAGAVVVDDGDLSRFYVRFGRYEMKNSGAFADPDALALHMTTRPFMEFHLRRRVKSLPNVTFLDGHDVCDLL NTADIVNGVRITRRYSGFLMALDADLVVDAMGRSARTPAFLESLGYQRPTEERAVARYGYASQQLSMPEASIAQRLVMFN PGGGRPGGLLLANEHDTFILAIGVPADTGEPPTDFAAMLAMAEPSLPPAIVEGLRRAYPIGEAVTYHHTAAFWRRYDQLA EFPSGLLVMGDALCSLDPTYGQGMTIAALEALTLRECLRAGDALLAQRFFRATAQYIGATWAVNQARDRTTSGVYHGVRQ RLQGWISRATLNASTQDVVLTERCFRVFNFIDPPSRLRDPALLPRIVWGNLRARFAAKRHRSETAPVGPASPPGNRIAVR S
Sequences:
>Translated_481_residues MGSTTQGVDSPNRLGEHAVVLGAGIAGLLAARVLSEFYDSVSVVERDKLPDYPCHRRGIPQGRHVHNFYSRGLQVLEELF PGLLDDLARAGAVVVDDGDLSRFYVRFGRYEMKNSGAFADPDALALHMTTRPFMEFHLRRRVKSLPNVTFLDGHDVCDLL NTADIVNGVRITRRYSGFLMALDADLVVDAMGRSARTPAFLESLGYQRPTEERAVARYGYASQQLSMPEASIAQRLVMFN PGGGRPGGLLLANEHDTFILAIGVPADTGEPPTDFAAMLAMAEPSLPPAIVEGLRRAYPIGEAVTYHHTAAFWRRYDQLA EFPSGLLVMGDALCSLDPTYGQGMTIAALEALTLRECLRAGDALLAQRFFRATAQYIGATWAVNQARDRTTSGVYHGVRQ RLQGWISRATLNASTQDVVLTERCFRVFNFIDPPSRLRDPALLPRIVWGNLRARFAAKRHRSETAPVGPASPPGNRIAVR S >Mature_480_residues GSTTQGVDSPNRLGEHAVVLGAGIAGLLAARVLSEFYDSVSVVERDKLPDYPCHRRGIPQGRHVHNFYSRGLQVLEELFP GLLDDLARAGAVVVDDGDLSRFYVRFGRYEMKNSGAFADPDALALHMTTRPFMEFHLRRRVKSLPNVTFLDGHDVCDLLN TADIVNGVRITRRYSGFLMALDADLVVDAMGRSARTPAFLESLGYQRPTEERAVARYGYASQQLSMPEASIAQRLVMFNP GGGRPGGLLLANEHDTFILAIGVPADTGEPPTDFAAMLAMAEPSLPPAIVEGLRRAYPIGEAVTYHHTAAFWRRYDQLAE FPSGLLVMGDALCSLDPTYGQGMTIAALEALTLRECLRAGDALLAQRFFRATAQYIGATWAVNQARDRTTSGVYHGVRQR LQGWISRATLNASTQDVVLTERCFRVFNFIDPPSRLRDPALLPRIVWGNLRARFAAKRHRSETAPVGPASPPGNRIAVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52865; Mature: 52734
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTTQGVDSPNRLGEHAVVLGAGIAGLLAARVLSEFYDSVSVVERDKLPDYPCHRRGIP CCCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC QGRHVHNFYSRGLQVLEELFPGLLDDLARAGAVVVDDGDLSRFYVRFGRYEMKNSGAFAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCEECCCCCCCC PDALALHMTTRPFMEFHLRRRVKSLPNVTFLDGHDVCDLLNTADIVNGVRITRRYSGFLM CCCEEEEECHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHEEHHCCEEE ALDADLVVDAMGRSARTPAFLESLGYQRPTEERAVARYGYASQQLSMPEASIAQRLVMFN EECHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCHHHHHCEEEEEC PGGGRPGGLLLANEHDTFILAIGVPADTGEPPTDFAAMLAMAEPSLPPAIVEGLRRAYPI CCCCCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC GEAVTYHHTAAFWRRYDQLAEFPSGLLVMGDALCSLDPTYGQGMTIAALEALTLRECLRA CCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH GDALLAQRFFRATAQYIGATWAVNQARDRTTSGVYHGVRQRLQGWISRATLNASTQDVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TERCFRVFNFIDPPSRLRDPALLPRIVWGNLRARFAAKRHRSETAPVGPASPPGNRIAVR HHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC S C >Mature Secondary Structure GSTTQGVDSPNRLGEHAVVLGAGIAGLLAARVLSEFYDSVSVVERDKLPDYPCHRRGIP CCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC QGRHVHNFYSRGLQVLEELFPGLLDDLARAGAVVVDDGDLSRFYVRFGRYEMKNSGAFAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCEECCCCCCCC PDALALHMTTRPFMEFHLRRRVKSLPNVTFLDGHDVCDLLNTADIVNGVRITRRYSGFLM CCCEEEEECHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHEEHHCCEEE ALDADLVVDAMGRSARTPAFLESLGYQRPTEERAVARYGYASQQLSMPEASIAQRLVMFN EECHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCHHHHHCEEEEEC PGGGRPGGLLLANEHDTFILAIGVPADTGEPPTDFAAMLAMAEPSLPPAIVEGLRRAYPI CCCCCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC GEAVTYHHTAAFWRRYDQLAEFPSGLLVMGDALCSLDPTYGQGMTIAALEALTLRECLRA CCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH GDALLAQRFFRATAQYIGATWAVNQARDRTTSGVYHGVRQRLQGWISRATLNASTQDVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TERCFRVFNFIDPPSRLRDPALLPRIVWGNLRARFAAKRHRSETAPVGPASPPGNRIAVR HHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA